RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 PTMSP20962 102 aa20.19■□□□□ 0.82
ARHGEF28-201ENST00000296794 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.19■□□□□ 0.82
ARHGEF28-201ENST00000296794 GOLGA6L3A6NEY3 463 aa20.19■□□□□ 0.82
ARHGEF28-201ENST00000296794 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
ARHGEF28-201ENST00000296794 CRBNQ96SW2 442 aa20.17■□□□□ 0.82
ARHGEF28-201ENST00000296794 IGF1RP08069 1367 aa20.17■□□□□ 0.82
ARHGEF28-201ENST00000296794 CCDC144AA2RUR9 1427 aa20.17■□□□□ 0.82
ARHGEF28-201ENST00000296794 FAM161AQ3B820 660 aa20.16■□□□□ 0.82
ARHGEF28-201ENST00000296794 SLC4A3P48751 1232 aa20.16■□□□□ 0.82
ARHGEF28-201ENST00000296794 FAM69CQ0P6D2 419 aa20.16■□□□□ 0.82
ARHGEF28-201ENST00000296794 VGFO15240 615 aaPredicted RBP20.16■□□□□ 0.82
ARHGEF28-201ENST00000296794 TAOK2Q9UL54 1235 aa20.16■□□□□ 0.82
ARHGEF28-201ENST00000296794 ZNF330Q9Y3S2 320 aaPredicted RBP20.15■□□□□ 0.82
ARHGEF28-201ENST00000296794 NAP1L2Q9ULW6 460 aaPredicted RBP20.15■□□□□ 0.82
ARHGEF28-201ENST00000296794 FGD6Q6ZV73 1430 aa20.15■□□□□ 0.82
ARHGEF28-201ENST00000296794 NUTM2FA1L443 756 aa20.14■□□□□ 0.82
ARHGEF28-201ENST00000296794 TRAK1Q9UPV9 953 aa20.14■□□□□ 0.82
ARHGEF28-201ENST00000296794 GOLGA6L6A8MZA4 724 aa20.14■□□□□ 0.81
ARHGEF28-201ENST00000296794 CHAF1AQ13111 956 aaPredicted RBP20.14■□□□□ 0.81
ARHGEF28-201ENST00000296794 CCDC7Q96M83 1385 aa20.14■□□□□ 0.81
ARHGEF28-201ENST00000296794 UACAQ9BZF9 1416 aa20.12■□□□□ 0.81
ARHGEF28-201ENST00000296794 AMPHP49418 695 aa20.12■□□□□ 0.81
ARHGEF28-201ENST00000296794 RRP7AQ9Y3A4 280 aaKnown RBP20.12■□□□□ 0.81
ARHGEF28-201ENST00000296794 KIF7Q2M1P5 1343 aa20.12■□□□□ 0.81
ARHGEF28-201ENST00000296794 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
ARHGEF28-201ENST00000296794 FGD5Q6ZNL6 1462 aa20.11■□□□□ 0.81
ARHGEF28-201ENST00000296794 LRRC9Q6ZRR7 1453 aa20.1■□□□□ 0.81
ARHGEF28-201ENST00000296794 CNTLNQ9NXG0 1405 aa20.09■□□□□ 0.81
ARHGEF28-201ENST00000296794 NRDCO43847 1150 aa20.09■□□□□ 0.81
ARHGEF28-201ENST00000296794 E9PSI1 815 aa20.08■□□□□ 0.8
ARHGEF28-201ENST00000296794 GSE1Q14687 1217 aa20.08■□□□□ 0.8
ARHGEF28-201ENST00000296794 KIAA1211Q6ZU35 1233 aa20.08■□□□□ 0.8
ARHGEF28-201ENST00000296794 MYOM3Q5VTT5 1437 aa20.08■□□□□ 0.8
ARHGEF28-201ENST00000296794 STK31Q9BXU1 1019 aa20.08■□□□□ 0.8
ARHGEF28-201ENST00000296794 BCL2L13Q9BXK5 485 aa20.07■□□□□ 0.8
ARHGEF28-201ENST00000296794 FOXD4L1Q9NU39 408 aa20.07■□□□□ 0.8
ARHGEF28-201ENST00000296794 WASHC2AQ641Q2 1341 aa20.06■□□□□ 0.8
ARHGEF28-201ENST00000296794 DRC7Q8IY82 874 aa20.06■□□□□ 0.8
ARHGEF28-201ENST00000296794 RAD54L2Q9Y4B4 1467 aa20.06■□□□□ 0.8
ARHGEF28-201ENST00000296794 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.05■□□□□ 0.89e-7■■■□□ 18
ARHGEF28-201ENST00000296794 TMX4Q9H1E5 349 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF28-201ENST00000296794 RRBP1Q9P2E9 1410 aaKnown RBP20.04■□□□□ 0.8
ARHGEF28-201ENST00000296794 COG6Q9Y2V7 657 aa20.04■□□□□ 0.8
ARHGEF28-201ENST00000296794 LTV1Q96GA3 475 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF28-201ENST00000296794 CGNL1Q0VF96 1302 aa20.04■□□□□ 0.8
ARHGEF28-201ENST00000296794 APAF1O14727 1248 aa20.03■□□□□ 0.8
ARHGEF28-201ENST00000296794 HDAC5Q9UQL6 1122 aa20.02■□□□□ 0.8
ARHGEF28-201ENST00000296794 ARAP1Q96P48 1450 aa20.02■□□□□ 0.8
ARHGEF28-201ENST00000296794 KIAA2012Q0VF49 1180 aa20.02■□□□□ 0.8
ARHGEF28-201ENST00000296794 AQRO60306 1485 aaKnown RBP eCLIP20.01■□□□□ 0.791e-6■■□□□ 14.2
ARHGEF28-201ENST00000296794 LMOD3Q0VAK6 560 aa20.01■□□□□ 0.79
ARHGEF28-201ENST00000296794 SYAP1Q96A49 352 aaPredicted RBP20.01■□□□□ 0.79
ARHGEF28-201ENST00000296794 CUX1P39880 1505 aa20■□□□□ 0.79
ARHGEF28-201ENST00000296794 HMMRO75330 724 aa20■□□□□ 0.79
ARHGEF28-201ENST00000296794 TULP1O00294 542 aaPredicted RBP19.99■□□□□ 0.79
ARHGEF28-201ENST00000296794 ZNF644Q9H582 1327 aaPredicted RBP19.99■□□□□ 0.79
ARHGEF28-201ENST00000296794 ZKSCAN2Q63HK3 967 aa19.99■□□□□ 0.79
ARHGEF28-201ENST00000296794 DDX11L8A8MPP1 907 aa19.99■□□□□ 0.79
ARHGEF28-201ENST00000296794 AEBP2Q6ZN18 517 aaPredicted RBP19.99■□□□□ 0.79
ARHGEF28-201ENST00000296794 EVC2Q86UK5 1308 aa19.97■□□□□ 0.79
ARHGEF28-201ENST00000296794 TRIM6-TRIM34B2RNG4 842 aa19.97■□□□□ 0.79
ARHGEF28-201ENST00000296794 SLC4A10Q6U841 1118 aa19.97■□□□□ 0.79
ARHGEF28-201ENST00000296794 ISY1Q9ULR0 285 aaKnown RBP19.95■□□□□ 0.78
ARHGEF28-201ENST00000296794 COG3Q96JB2 828 aa19.95■□□□□ 0.78
ARHGEF28-201ENST00000296794 CASKIN1Q8WXD9 1431 aa19.95■□□□□ 0.78
ARHGEF28-201ENST00000296794 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.95■□□□□ 0.78
ARHGEF28-201ENST00000296794 ARID3AQ99856 593 aa19.95■□□□□ 0.78
ARHGEF28-201ENST00000296794 ERICH3Q5RHP9 1530 aa19.94■□□□□ 0.78
ARHGEF28-201ENST00000296794 NOL8Q76FK4 1167 aaKnown RBP19.94■□□□□ 0.78
ARHGEF28-201ENST00000296794 NCOA2Q15596 1464 aa19.94■□□□□ 0.78
ARHGEF28-201ENST00000296794 ST18O60284 1047 aa19.93■□□□□ 0.78
ARHGEF28-201ENST00000296794 TAF7LQ5H9L4 462 aa19.93■□□□□ 0.78
ARHGEF28-201ENST00000296794 ANKRD45Q5TZF3 282 aa19.93■□□□□ 0.78
ARHGEF28-201ENST00000296794 MINK1Q8N4C8 1332 aaPredicted RBP19.92■□□□□ 0.78
ARHGEF28-201ENST00000296794 ELL2O00472 640 aaPredicted RBP19.92■□□□□ 0.78
ARHGEF28-201ENST00000296794 EVA1CP58658 441 aa19.92■□□□□ 0.78
ARHGEF28-201ENST00000296794 GORABQ5T7V8 394 aa19.92■□□□□ 0.78
ARHGEF28-201ENST00000296794 SYNJ1O43426 1573 aa19.92■□□□□ 0.78
ARHGEF28-201ENST00000296794 GTF2E1P29083 439 aaPredicted RBP19.91■□□□□ 0.78
ARHGEF28-201ENST00000296794 CHMP3Q9Y3E7 222 aa19.91■□□□□ 0.78
ARHGEF28-201ENST00000296794 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
ARHGEF28-201ENST00000296794 NGEFQ8N5V2 710 aa19.9■□□□□ 0.78
ARHGEF28-201ENST00000296794 FYCO1Q9BQS8 1478 aa19.9■□□□□ 0.78
ARHGEF28-201ENST00000296794 BRD4O60885 1362 aaPredicted RBP19.89■□□□□ 0.78
ARHGEF28-201ENST00000296794 FOXD4L5Q5VV16 416 aaPredicted RBP19.88■□□□□ 0.77
ARHGEF28-201ENST00000296794 FOXD4L4Q8WXT5 416 aaPredicted RBP19.88■□□□□ 0.77
ARHGEF28-201ENST00000296794 RSPH6AQ9H0K4 717 aa19.88■□□□□ 0.77
ARHGEF28-201ENST00000296794 DDX49Q9Y6V7 483 aaKnown RBP19.88■□□□□ 0.77
ARHGEF28-201ENST00000296794 HTATSF1O43719 755 aaKnown RBP19.87■□□□□ 0.77
ARHGEF28-201ENST00000296794 MIA2Q96PC5 1412 aa19.87■□□□□ 0.77
ARHGEF28-201ENST00000296794 STAC3Q96MF2 364 aa19.87■□□□□ 0.77
ARHGEF28-201ENST00000296794 GNL2Q13823 731 aaKnown RBP19.86■□□□□ 0.77
ARHGEF28-201ENST00000296794 DDX19BQ9UMR2 479 aa19.86■□□□□ 0.77
ARHGEF28-201ENST00000296794 PSME1Q06323 249 aa19.85■□□□□ 0.77
ARHGEF28-201ENST00000296794 C1orf141Q5JVX7 400 aa19.85■□□□□ 0.77
ARHGEF28-201ENST00000296794 DZIP1LQ8IYY4 767 aaKnown RBP19.85■□□□□ 0.77
ARHGEF28-201ENST00000296794 SKOR2Q2VWA4 1001 aaPredicted RBP19.85■□□□□ 0.77
ARHGEF28-201ENST00000296794 ANKRD50Q9ULJ7 1429 aa19.85■□□□□ 0.77
ARHGEF28-201ENST00000296794 GPATCH3Q96I76 525 aa19.85■□□□□ 0.77
ARHGEF28-201ENST00000296794 CDCA7LQ96GN5 454 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms