RNA–Protein interactions for RNA: ENST00000296440.10

PLXNB1-201, Transcript of plexin B1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLXNB1, Length 7,143 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-201ENST00000296440 SF3A1Q15459 793 aaKnown RBP16.47■□□□□ 0.23
PLXNB1-201ENST00000296440 TPM3P06753 285 aa16.46■□□□□ 0.23
PLXNB1-201ENST00000296440 IKQ13123 557 aaPredicted RBP16.46■□□□□ 0.23
PLXNB1-201ENST00000296440 HMMRO75330 724 aa16.45■□□□□ 0.22
PLXNB1-201ENST00000296440 MSNP26038 577 aaKnown RBP16.45■□□□□ 0.22
PLXNB1-201ENST00000296440 APPP05067 770 aa16.45■□□□□ 0.22
PLXNB1-201ENST00000296440 TSR1Q2NL82 804 aaKnown RBP16.45■□□□□ 0.22
PLXNB1-201ENST00000296440 PPM1FP49593 454 aaPredicted RBP16.45■□□□□ 0.22
PLXNB1-201ENST00000296440 KIF27Q86VH2 1401 aa16.45■□□□□ 0.22
PLXNB1-201ENST00000296440 VSIG10Q8N0Z9 540 aa16.44■□□□□ 0.22
PLXNB1-201ENST00000296440 TEFQ10587 303 aa16.44■□□□□ 0.22
PLXNB1-201ENST00000296440 GOLGA6L1Q8N7Z2 621 aa16.43■□□□□ 0.22
PLXNB1-201ENST00000296440 NOL8Q76FK4 1167 aaKnown RBP16.42■□□□□ 0.22
PLXNB1-201ENST00000296440 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
PLXNB1-201ENST00000296440 FYB1O15117 783 aa16.4■□□□□ 0.22
PLXNB1-201ENST00000296440 LRRFIP1Q32MZ4 808 aaKnown RBP16.4■□□□□ 0.22
PLXNB1-201ENST00000296440 ODF2Q5BJF6 829 aa16.4■□□□□ 0.22
PLXNB1-201ENST00000296440 LMOD3Q0VAK6 560 aa16.4■□□□□ 0.22
PLXNB1-201ENST00000296440 PCMTD1Q96MG8 357 aaPredicted RBP16.4■□□□□ 0.22
PLXNB1-201ENST00000296440 USP35Q9P2H5 1018 aa16.39■□□□□ 0.21
PLXNB1-201ENST00000296440 KIF3AQ9Y496 699 aa16.39■□□□□ 0.21
PLXNB1-201ENST00000296440 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.21
PLXNB1-201ENST00000296440 PPP4R2Q9NY27 417 aa16.39■□□□□ 0.21
PLXNB1-201ENST00000296440 EIF3AQ14152 1382 aaKnown RBP16.39■□□□□ 0.21
PLXNB1-201ENST00000296440 H3BQV1 296 aa16.38■□□□□ 0.21
PLXNB1-201ENST00000296440 IFFO2Q5TF58 517 aa16.38■□□□□ 0.21
PLXNB1-201ENST00000296440 CCDC27Q2M243 656 aa16.38■□□□□ 0.21
PLXNB1-201ENST00000296440 EIF2S2P20042 333 aaKnown RBP16.37■□□□□ 0.21
PLXNB1-201ENST00000296440 SPDYE4A6NLX3 237 aa16.36■□□□□ 0.21
PLXNB1-201ENST00000296440 KIF16BQ96L93 1317 aa16.36■□□□□ 0.21
PLXNB1-201ENST00000296440 IBSPP21815 317 aaPredicted RBP16.36■□□□□ 0.21
PLXNB1-201ENST00000296440 CSPP1Q1MSJ5 1256 aa16.36■□□□□ 0.21
PLXNB1-201ENST00000296440 SMC4Q9NTJ3 1288 aa16.36■□□□□ 0.21
PLXNB1-201ENST00000296440 WDR70Q9NW82 654 aa16.36■□□□□ 0.21
PLXNB1-201ENST00000296440 CCDC47Q96A33 483 aaKnown RBP16.36■□□□□ 0.21
PLXNB1-201ENST00000296440 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
PLXNB1-201ENST00000296440 FAM184AQ8NB25 1140 aa16.35■□□□□ 0.21
PLXNB1-201ENST00000296440 CT47A1Q5JQC4 288 aaPredicted RBP16.35■□□□□ 0.21
PLXNB1-201ENST00000296440 TRIM29Q14134 588 aa16.35■□□□□ 0.21
PLXNB1-201ENST00000296440 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.35■□□□□ 0.21
PLXNB1-201ENST00000296440 COG3Q96JB2 828 aa16.35■□□□□ 0.21
PLXNB1-201ENST00000296440 MTMR7Q9Y216 660 aa16.34■□□□□ 0.21
PLXNB1-201ENST00000296440 ERICH2A1L162 156 aa16.34■□□□□ 0.21
PLXNB1-201ENST00000296440 SYAP1Q96A49 352 aaPredicted RBP16.34■□□□□ 0.21
PLXNB1-201ENST00000296440 C9orf78Q9NZ63 289 aaPredicted RBP16.33■□□□□ 0.21
PLXNB1-201ENST00000296440 PKD2Q13563 968 aa16.33■□□□□ 0.2
PLXNB1-201ENST00000296440 FAM177BA6PVY3 158 aa16.33■□□□□ 0.2
PLXNB1-201ENST00000296440 ZFYVE27Q5T4F4 411 aa16.33■□□□□ 0.2
PLXNB1-201ENST00000296440 OSCARQ8IYS5 282 aa16.32■□□□□ 0.2
PLXNB1-201ENST00000296440 FAM69CQ0P6D2 419 aa16.32■□□□□ 0.2
PLXNB1-201ENST00000296440 WDHD1O75717 1129 aaPredicted RBP16.31■□□□□ 0.2
PLXNB1-201ENST00000296440 TMEM87AQ8NBN3 555 aa16.31■□□□□ 0.2
PLXNB1-201ENST00000296440 NFXL1Q6ZNB6 911 aa16.31■□□□□ 0.2
PLXNB1-201ENST00000296440 RILPL2Q969X0 211 aa16.31■□□□□ 0.2
PLXNB1-201ENST00000296440 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
PLXNB1-201ENST00000296440 KTN1Q86UP2 1357 aaKnown RBP16.3■□□□□ 0.2
PLXNB1-201ENST00000296440 RAPGEF4Q8WZA2 1011 aa16.3■□□□□ 0.2
PLXNB1-201ENST00000296440 TPM1P09493 284 aa16.29■□□□□ 0.2
PLXNB1-201ENST00000296440 CPLX2Q6PUV4 134 aaKnown RBP16.29■□□□□ 0.2
PLXNB1-201ENST00000296440 RWDD1Q9H446 243 aaPredicted RBP16.29■□□□□ 0.2
PLXNB1-201ENST00000296440 STRN4Q9NRL3 753 aa16.29■□□□□ 0.2
PLXNB1-201ENST00000296440 PATL2C9JE40 543 aaKnown RBP16.29■□□□□ 0.2
PLXNB1-201ENST00000296440 PLIN1O60240 522 aa16.29■□□□□ 0.2
PLXNB1-201ENST00000296440 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
PLXNB1-201ENST00000296440 MCTP1Q6DN14 999 aa16.29■□□□□ 0.2
PLXNB1-201ENST00000296440 GOLGA3Q08378 1498 aa16.28■□□□□ 0.2
PLXNB1-201ENST00000296440 RBM5P52756 815 aaKnown RBP eCLIP16.28■□□□□ 0.28e-7■■■□□ 16.1
PLXNB1-201ENST00000296440 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.2
PLXNB1-201ENST00000296440 TRDNQ13061 729 aa16.28■□□□□ 0.2
PLXNB1-201ENST00000296440 SIN3AQ96ST3 1273 aa16.27■□□□□ 0.2
PLXNB1-201ENST00000296440 DDX58O95786 925 aaKnown RBP16.27■□□□□ 0.2
PLXNB1-201ENST00000296440 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
PLXNB1-201ENST00000296440 GBP4Q96PP9 640 aa16.27■□□□□ 0.19
PLXNB1-201ENST00000296440 NLRP2Q9NX02 1062 aa16.26■□□□□ 0.19
PLXNB1-201ENST00000296440 CHMP4CQ96CF2 233 aa16.26■□□□□ 0.19
PLXNB1-201ENST00000296440 CCDC97Q96F63 343 aaPredicted RBP16.25■□□□□ 0.19
PLXNB1-201ENST00000296440 WRNQ14191 1432 aaPredicted RBP eCLIP16.25■□□□□ 0.19
PLXNB1-201ENST00000296440 MIER1Q8N108 512 aa16.24■□□□□ 0.19
PLXNB1-201ENST00000296440 ATP2B2Q01814 1243 aa16.23■□□□□ 0.19
PLXNB1-201ENST00000296440 RBM42Q9BTD8 480 aaKnown RBP16.23■□□□□ 0.19
PLXNB1-201ENST00000296440 EPS15P42566 896 aa16.23■□□□□ 0.19
PLXNB1-201ENST00000296440 NUP155O75694 1391 aa16.23■□□□□ 0.19
PLXNB1-201ENST00000296440 MPHOSPH10O00566 681 aaKnown RBP16.23■□□□□ 0.19
PLXNB1-201ENST00000296440 FOXD4L5Q5VV16 416 aaPredicted RBP16.23■□□□□ 0.19
PLXNB1-201ENST00000296440 CCDC70Q6NSX1 233 aa16.23■□□□□ 0.19
PLXNB1-201ENST00000296440 FOXD4L4Q8WXT5 416 aaPredicted RBP16.23■□□□□ 0.19
PLXNB1-201ENST00000296440 PDS5BQ9NTI5 1447 aa16.22■□□□□ 0.19
PLXNB1-201ENST00000296440 PTMSP20962 102 aa16.22■□□□□ 0.19
PLXNB1-201ENST00000296440 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
PLXNB1-201ENST00000296440 CCDC146Q8IYE0 955 aa16.22■□□□□ 0.19
PLXNB1-201ENST00000296440 CPLX1O14810 134 aa16.21■□□□□ 0.19
PLXNB1-201ENST00000296440 CCAR2Q8N163 923 aaKnown RBP16.21■□□□□ 0.19
PLXNB1-201ENST00000296440 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.21■□□□□ 0.19
PLXNB1-201ENST00000296440 TTLL12Q14166 644 aaPredicted RBP16.21■□□□□ 0.19
PLXNB1-201ENST00000296440 KIF6Q6ZMV9 814 aa16.21■□□□□ 0.19
PLXNB1-201ENST00000296440 FHAD1B1AJZ9 1412 aa16.2■□□□□ 0.18
PLXNB1-201ENST00000296440 ANKRD20A12PQ8NF67 263 aa16.2■□□□□ 0.18
PLXNB1-201ENST00000296440 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
PLXNB1-201ENST00000296440 CCDC180Q9P1Z9 1646 aa16.2■□□□□ 0.18
PLXNB1-201ENST00000296440 PDE3BQ13370 1112 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms