RNA–Protein interactions for RNA: ENST00000296122.10

PPP1CB-201, Transcript of protein phosphatase 1 catalytic subunit beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CB, Length 3,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CB-201ENST00000296122 DENND4BO75064 1496 aaPredicted RBP18.3■□□□□ 0.52
PPP1CB-201ENST00000296122 ATP7AQ04656 1500 aa18.29■□□□□ 0.52
PPP1CB-201ENST00000296122 PLXNC1O60486 1568 aa18.29■□□□□ 0.52
PPP1CB-201ENST00000296122 NBPF8Q3BBV2 869 aa18.29■□□□□ 0.52
PPP1CB-201ENST00000296122 WASHC2CQ9Y4E1 1318 aa18.28■□□□□ 0.52
PPP1CB-201ENST00000296122 ESF1Q9H501 851 aaKnown RBP18.27■□□□□ 0.51
PPP1CB-201ENST00000296122 CFAP74Q9C0B2 1584 aa18.26■□□□□ 0.51
PPP1CB-201ENST00000296122 KDM5DQ9BY66 1539 aa18.25■□□□□ 0.51
PPP1CB-201ENST00000296122 NEO1Q92859 1461 aa18.25■□□□□ 0.51
PPP1CB-201ENST00000296122 ROCK2O75116 1388 aaKnown RBP18.24■□□□□ 0.51
PPP1CB-201ENST00000296122 RIMBP3CA6NJZ7 1639 aa18.23■□□□□ 0.51
PPP1CB-201ENST00000296122 RIMBP3BA6NNM3 1639 aa18.23■□□□□ 0.51
PPP1CB-201ENST00000296122 RIMBP3Q9UFD9 1639 aa18.23■□□□□ 0.51
PPP1CB-201ENST00000296122 POGZQ7Z3K3 1410 aa18.23■□□□□ 0.51
PPP1CB-201ENST00000296122 ZFYVE16Q7Z3T8 1539 aa18.23■□□□□ 0.51
PPP1CB-201ENST00000296122 A2MP01023 1474 aa18.22■□□□□ 0.51
PPP1CB-201ENST00000296122 TEX14Q8IWB6 1497 aa18.2■□□□□ 0.5
PPP1CB-201ENST00000296122 USP47Q96K76 1375 aa18.2■□□□□ 0.5
PPP1CB-201ENST00000296122 CNGB1Q14028 1251 aaPredicted RBP18.19■□□□□ 0.5
PPP1CB-201ENST00000296122 STAG3Q9UJ98 1225 aa18.17■□□□□ 0.5
PPP1CB-201ENST00000296122 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
PPP1CB-201ENST00000296122 STAC3Q96MF2 364 aa18.16■□□□□ 0.5
PPP1CB-201ENST00000296122 UNC13BO14795 1591 aa18.16■□□□□ 0.5
PPP1CB-201ENST00000296122 ARID4BQ4LE39 1312 aaPredicted RBP18.15■□□□□ 0.5
PPP1CB-201ENST00000296122 MLH3Q9UHC1 1453 aa18.14■□□□□ 0.5
PPP1CB-201ENST00000296122 MLECQ14165 292 aa18.14■□□□□ 0.49
PPP1CB-201ENST00000296122 IQGAP3Q86VI3 1631 aa18.12■□□□□ 0.49
PPP1CB-201ENST00000296122 WASHC2AQ641Q2 1341 aa18.11■□□□□ 0.49
PPP1CB-201ENST00000296122 ST20-MTHFSA0A0A6YYL1 179 aa18.11■□□□□ 0.49
PPP1CB-201ENST00000296122 INO80Q9ULG1 1556 aaPredicted RBP18.1■□□□□ 0.49
PPP1CB-201ENST00000296122 CCDC7Q96M83 1385 aa18.09■□□□□ 0.49
PPP1CB-201ENST00000296122 HECW2Q9P2P5 1572 aa18.09■□□□□ 0.49
PPP1CB-201ENST00000296122 CCER2I3L3R5 266 aa18.07■□□□□ 0.48
PPP1CB-201ENST00000296122 MAGI2Q86UL8 1455 aa18.07■□□□□ 0.48
PPP1CB-201ENST00000296122 KIF7Q2M1P5 1343 aa18.06■□□□□ 0.48
PPP1CB-201ENST00000296122 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
PPP1CB-201ENST00000296122 RALGAPBQ86X10 1494 aa18.05■□□□□ 0.48
PPP1CB-201ENST00000296122 TMF1P82094 1093 aa18.05■□□□□ 0.48
PPP1CB-201ENST00000296122 NBPF1Q3BBV0 1214 aa18.05■□□□□ 0.48
PPP1CB-201ENST00000296122 PLA2R1Q13018 1463 aa18.04■□□□□ 0.48
PPP1CB-201ENST00000296122 GLI2P10070 1586 aa18.04■□□□□ 0.48
PPP1CB-201ENST00000296122 CDCA8Q53HL2 280 aa18.04■□□□□ 0.48
PPP1CB-201ENST00000296122 ATP10AO60312 1499 aa18.03■□□□□ 0.48
PPP1CB-201ENST00000296122 PRAG1Q86YV5 1406 aa18.02■□□□□ 0.48
PPP1CB-201ENST00000296122 EIF2AK4Q9P2K8 1649 aaKnown RBP18.02■□□□□ 0.47
PPP1CB-201ENST00000296122 KDM5CP41229 1560 aa18.02■□□□□ 0.47
PPP1CB-201ENST00000296122 KIDINS220Q9ULH0 1771 aa18.01■□□□□ 0.47
PPP1CB-201ENST00000296122 SLC24A1O60721 1099 aa18.01■□□□□ 0.47
PPP1CB-201ENST00000296122 CNTLNQ9NXG0 1405 aa18■□□□□ 0.47
PPP1CB-201ENST00000296122 YEATS2Q9ULM3 1422 aa18■□□□□ 0.47
PPP1CB-201ENST00000296122 EIF3AQ14152 1382 aaKnown RBP18■□□□□ 0.47
PPP1CB-201ENST00000296122 TSPOAP1O95153 1857 aa18■□□□□ 0.47
PPP1CB-201ENST00000296122 TET3O43151 1660 aa17.99■□□□□ 0.47
PPP1CB-201ENST00000296122 SLC52A1Q9NWF4 448 aa17.99■□□□□ 0.47
PPP1CB-201ENST00000296122 DIP2BQ9P265 1576 aa17.98■□□□□ 0.47
PPP1CB-201ENST00000296122 C11orf95C9JLR9 678 aaPredicted RBP17.98■□□□□ 0.47
PPP1CB-201ENST00000296122 MRS2Q9HD23 443 aa17.98■□□□□ 0.47
PPP1CB-201ENST00000296122 VGFO15240 615 aaPredicted RBP17.98■□□□□ 0.47
PPP1CB-201ENST00000296122 PRDM15P57071 1507 aaPredicted RBP17.98■□□□□ 0.47
PPP1CB-201ENST00000296122 PTPRTO14522 1441 aa17.97■□□□□ 0.47
PPP1CB-201ENST00000296122 TRPM2O94759 1503 aa17.97■□□□□ 0.47
PPP1CB-201ENST00000296122 PPP6R1Q9UPN7 881 aa17.97■□□□□ 0.47
PPP1CB-201ENST00000296122 MAP3K4Q9Y6R4 1608 aa17.96■□□□□ 0.47
PPP1CB-201ENST00000296122 BCANQ96GW7 911 aa17.96■□□□□ 0.47
PPP1CB-201ENST00000296122 RPGRIP1LQ68CZ1 1315 aa17.95■□□□□ 0.46
PPP1CB-201ENST00000296122 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
PPP1CB-201ENST00000296122 PLPPR3Q6T4P5 718 aa17.94■□□□□ 0.46
PPP1CB-201ENST00000296122 CFAP70Q5T0N1 1121 aa17.94■□□□□ 0.46
PPP1CB-201ENST00000296122 NUTM2DQ5VT03 806 aaPredicted RBP17.93■□□□□ 0.46
PPP1CB-201ENST00000296122 NPATQ14207 1427 aa17.93■□□□□ 0.46
PPP1CB-201ENST00000296122 SPATA31E1Q6ZUB1 1445 aa17.93■□□□□ 0.46
PPP1CB-201ENST00000296122 EFCAB6Q5THR3 1501 aa17.93■□□□□ 0.46
PPP1CB-201ENST00000296122 FAM9BQ8IZU0 186 aa17.92■□□□□ 0.46
PPP1CB-201ENST00000296122 E9PCH4 1651 aa17.92■□□□□ 0.46
PPP1CB-201ENST00000296122 GTF3C3Q9Y5Q9 886 aa17.92■□□□□ 0.46
PPP1CB-201ENST00000296122 PRKRIP1Q9H875 184 aaPredicted RBP17.92■□□□□ 0.46
PPP1CB-201ENST00000296122 DEPDC5O75140 1603 aa17.91■□□□□ 0.46
PPP1CB-201ENST00000296122 ABCA6Q8N139 1617 aa17.91■□□□□ 0.46
PPP1CB-201ENST00000296122 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
PPP1CB-201ENST00000296122 HNRNPUQ00839 825 aaKnown RBP eCLIP17.9■□□□□ 0.46
PPP1CB-201ENST00000296122 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
PPP1CB-201ENST00000296122 IDI1Q13907 227 aa17.89■□□□□ 0.45
PPP1CB-201ENST00000296122 ADGRF5Q8IZF2 1346 aa17.89■□□□□ 0.45
PPP1CB-201ENST00000296122 SPHKAPQ2M3C7 1700 aa17.89■□□□□ 0.45
PPP1CB-201ENST00000296122 LMTK2Q8IWU2 1503 aa17.89■□□□□ 0.45
PPP1CB-201ENST00000296122 HDGFP51858 240 aaKnown RBP17.88■□□□□ 0.45
PPP1CB-201ENST00000296122 ABCC3O15438 1527 aa17.88■□□□□ 0.45
PPP1CB-201ENST00000296122 GPRASP1Q5JY77 1395 aa17.87■□□□□ 0.45
PPP1CB-201ENST00000296122 VWDEQ8N2E2 1590 aa17.87■□□□□ 0.45
PPP1CB-201ENST00000296122 NEFLP07196 543 aa17.87■□□□□ 0.45
PPP1CB-201ENST00000296122 TRAK1Q9UPV9 953 aa17.87■□□□□ 0.45
PPP1CB-201ENST00000296122 KNSTRNQ9Y448 316 aa17.87■□□□□ 0.45
PPP1CB-201ENST00000296122 NOS1P29475 1434 aa17.87■□□□□ 0.45
PPP1CB-201ENST00000296122 CFAP65Q6ZU64 1925 aaKnown RBP17.86■□□□□ 0.45
PPP1CB-201ENST00000296122 FBXO31Q5XUX0 539 aaPredicted RBP17.86■□□□□ 0.45
PPP1CB-201ENST00000296122 RNF17Q9BXT8 1623 aaKnown RBP17.85■□□□□ 0.45
PPP1CB-201ENST00000296122 FRMPD1Q5SYB0 1578 aa17.85■□□□□ 0.45
PPP1CB-201ENST00000296122 CLTCL1P53675 1640 aa17.85■□□□□ 0.45
PPP1CB-201ENST00000296122 UGGT1Q9NYU2 1555 aa17.84■□□□□ 0.45
PPP1CB-201ENST00000296122 CEP152O94986 1710 aa17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms