RNA–Protein interactions for RNA: ENST00000289547.8

NPC1L1-201, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 5,048 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-201ENST00000289547 SUPT6HQ7KZ85 1726 aaKnown RBP14.81□□□□□ -0.04
NPC1L1-201ENST00000289547 C9orf84Q5VXU9 1444 aa14.8□□□□□ -0.04
NPC1L1-201ENST00000289547 THOC2Q8NI27 1593 aaKnown RBP14.8□□□□□ -0.04
NPC1L1-201ENST00000289547 ROCK2O75116 1388 aaKnown RBP14.8□□□□□ -0.04
NPC1L1-201ENST00000289547 UGGT2Q9NYU1 1516 aa14.79□□□□□ -0.04
NPC1L1-201ENST00000289547 ARHGEF11O15085 1522 aa14.79□□□□□ -0.04
NPC1L1-201ENST00000289547 STAC3Q96MF2 364 aa14.78□□□□□ -0.04
NPC1L1-201ENST00000289547 WDR7Q9Y4E6 1490 aa14.77□□□□□ -0.04
NPC1L1-201ENST00000289547 ABCA5Q8WWZ7 1642 aa14.77□□□□□ -0.04
NPC1L1-201ENST00000289547 PAK3O75914 559 aaPredicted RBP14.77□□□□□ -0.04
NPC1L1-201ENST00000289547 TIAM1Q13009 1591 aa14.77□□□□□ -0.04
NPC1L1-201ENST00000289547 NUDCQ9Y266 331 aa14.77□□□□□ -0.05
NPC1L1-201ENST00000289547 FANCAO15360 1455 aa14.76□□□□□ -0.05
NPC1L1-201ENST00000289547 RAPGEF6Q8TEU7 1601 aa14.75□□□□□ -0.05
NPC1L1-201ENST00000289547 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
NPC1L1-201ENST00000289547 NGDNQ8NEJ9 315 aaKnown RBP14.74□□□□□ -0.05
NPC1L1-201ENST00000289547 CCDC141Q6ZP82 1450 aa14.74□□□□□ -0.05
NPC1L1-201ENST00000289547 TARBP1Q13395 1621 aaKnown RBP14.74□□□□□ -0.05
NPC1L1-201ENST00000289547 PCF11O94913 1555 aaKnown RBP14.74□□□□□ -0.05
NPC1L1-201ENST00000289547 PPP6R1Q9UPN7 881 aa14.74□□□□□ -0.05
NPC1L1-201ENST00000289547 CTTNBP2Q8WZ74 1663 aa14.74□□□□□ -0.05
NPC1L1-201ENST00000289547 ABCC2Q92887 1545 aa14.73□□□□□ -0.05
NPC1L1-201ENST00000289547 SLC52A1Q9NWF4 448 aa14.72□□□□□ -0.05
NPC1L1-201ENST00000289547 ANKLE2Q86XL3 938 aa14.72□□□□□ -0.05
NPC1L1-201ENST00000289547 TXNDC2Q86VQ3 553 aa14.71□□□□□ -0.05
NPC1L1-201ENST00000289547 TERF2IPQ9NYB0 399 aa14.71□□□□□ -0.05
NPC1L1-201ENST00000289547 CEP170Q5SW79 1584 aa14.71□□□□□ -0.05
NPC1L1-201ENST00000289547 ATF3P18847 181 aa14.71□□□□□ -0.06
NPC1L1-201ENST00000289547 PNNQ9H307 717 aaKnown RBP14.7□□□□□ -0.06
NPC1L1-201ENST00000289547 ATP10BO94823 1461 aa14.69□□□□□ -0.06
NPC1L1-201ENST00000289547 DNAJC5Q9H3Z4 198 aa14.68□□□□□ -0.06
NPC1L1-201ENST00000289547 CSB-PGBD3P0DP91 1061 aa14.68□□□□□ -0.06
NPC1L1-201ENST00000289547 CCDC9Q9Y3X0 531 aaKnown RBP14.67□□□□□ -0.06
NPC1L1-201ENST00000289547 TRAK1Q9UPV9 953 aa14.67□□□□□ -0.06
NPC1L1-201ENST00000289547 DAPK1P53355 1430 aa14.67□□□□□ -0.06
NPC1L1-201ENST00000289547 MAPK8IP3Q9UPT6 1336 aa14.67□□□□□ -0.06
NPC1L1-201ENST00000289547 CCER2I3L3R5 266 aa14.67□□□□□ -0.06
NPC1L1-201ENST00000289547 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
NPC1L1-201ENST00000289547 PLCH2O75038 1416 aa14.66□□□□□ -0.06
NPC1L1-201ENST00000289547 GOLGA6L22H0YM25 854 aa14.66□□□□□ -0.06
NPC1L1-201ENST00000289547 SOX12O15370 315 aa14.66□□□□□ -0.06
NPC1L1-201ENST00000289547 RGS3P49796 1198 aa14.66□□□□□ -0.06
NPC1L1-201ENST00000289547 L3MBTL2Q969R5 705 aa14.66□□□□□ -0.06
NPC1L1-201ENST00000289547 DNTTIP2Q5QJE6 756 aaKnown RBP14.66□□□□□ -0.06
NPC1L1-201ENST00000289547 MAP3K1Q13233 1512 aa14.66□□□□□ -0.06
NPC1L1-201ENST00000289547 DHX57Q6P158 1386 aaKnown RBP14.66□□□□□ -0.06
NPC1L1-201ENST00000289547 CAMSAP2Q08AD1 1489 aa14.65□□□□□ -0.06
NPC1L1-201ENST00000289547 NCLP19338 710 aaKnown RBP14.65□□□□□ -0.06
NPC1L1-201ENST00000289547 MORC1Q86VD1 984 aa14.65□□□□□ -0.06
NPC1L1-201ENST00000289547 PRKCSHP14314 528 aaPredicted RBP14.64□□□□□ -0.07
NPC1L1-201ENST00000289547 IPO9Q96P70 1041 aaKnown RBP14.64□□□□□ -0.07
NPC1L1-201ENST00000289547 RRBP1Q9P2E9 1410 aaKnown RBP14.64□□□□□ -0.07
NPC1L1-201ENST00000289547 PTMAP06454 111 aaKnown RBP14.64□□□□□ -0.07
NPC1L1-201ENST00000289547 L1TD1Q5T7N2 865 aaKnown RBP14.64□□□□□ -0.07
NPC1L1-201ENST00000289547 MEX3CQ5U5Q3 659 aaKnown RBP14.63□□□□□ -0.07
NPC1L1-201ENST00000289547 PROSER2Q86WR7 435 aaPredicted RBP14.63□□□□□ -0.07
NPC1L1-201ENST00000289547 EVC2Q86UK5 1308 aa14.63□□□□□ -0.07
NPC1L1-201ENST00000289547 HFM1A2PYH4 1435 aa14.62□□□□□ -0.07
NPC1L1-201ENST00000289547 NUP153P49790 1475 aaKnown RBP14.62□□□□□ -0.07
NPC1L1-201ENST00000289547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.62□□□□□ -0.07
NPC1L1-201ENST00000289547 CDK11BP21127 795 aaKnown RBP14.61□□□□□ -0.07
NPC1L1-201ENST00000289547 ZNF518AQ6AHZ1 1483 aa14.61□□□□□ -0.07
NPC1L1-201ENST00000289547 NUTM2FA1L443 756 aa14.6□□□□□ -0.07
NPC1L1-201ENST00000289547 ROCK1Q13464 1354 aa14.6□□□□□ -0.07
NPC1L1-201ENST00000289547 VSIG10Q8N0Z9 540 aa14.59□□□□□ -0.07
NPC1L1-201ENST00000289547 HSPA5P11021 654 aaKnown RBP14.59□□□□□ -0.07
NPC1L1-201ENST00000289547 CC2D1BQ5T0F9 858 aaKnown RBP14.58□□□□□ -0.08
NPC1L1-201ENST00000289547 RPGRIP1LQ68CZ1 1315 aa14.58□□□□□ -0.08
NPC1L1-201ENST00000289547 U2SURPO15042 1029 aaKnown RBP14.58□□□□□ -0.08
NPC1L1-201ENST00000289547 DISP1Q96F81 1524 aa14.57□□□□□ -0.08
NPC1L1-201ENST00000289547 PSME1Q06323 249 aa14.57□□□□□ -0.08
NPC1L1-201ENST00000289547 FANCIQ9NVI1 1328 aa14.57□□□□□ -0.08
NPC1L1-201ENST00000289547 ANO8Q9HCE9 1232 aaPredicted RBP14.56□□□□□ -0.08
NPC1L1-201ENST00000289547 CHD1O14646 1710 aa14.56□□□□□ -0.08
NPC1L1-201ENST00000289547 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
NPC1L1-201ENST00000289547 MINK1Q8N4C8 1332 aaPredicted RBP14.56□□□□□ -0.08
NPC1L1-201ENST00000289547 AMER1Q5JTC6 1135 aaPredicted RBP14.54□□□□□ -0.08
NPC1L1-201ENST00000289547 RSPH6AQ9H0K4 717 aa14.54□□□□□ -0.08
NPC1L1-201ENST00000289547 GPATCH8Q9UKJ3 1502 aaKnown RBP14.54□□□□□ -0.08
NPC1L1-201ENST00000289547 ABCC10Q5T3U5 1492 aa14.53□□□□□ -0.08
NPC1L1-201ENST00000289547 PTPN23Q9H3S7 1636 aa14.53□□□□□ -0.08
NPC1L1-201ENST00000289547 KIAA1107Q9UPP5 1409 aa14.53□□□□□ -0.08
NPC1L1-201ENST00000289547 AMPHP49418 695 aa14.53□□□□□ -0.08
NPC1L1-201ENST00000289547 HSP90AA2PQ14568 343 aaPredicted RBP14.53□□□□□ -0.08
NPC1L1-201ENST00000289547 ITSN2Q9NZM3 1697 aa14.53□□□□□ -0.08
NPC1L1-201ENST00000289547 NPHP1O15259 732 aa14.52□□□□□ -0.08
NPC1L1-201ENST00000289547 EVA1CP58658 441 aa14.52□□□□□ -0.08
NPC1L1-201ENST00000289547 UHRF1BP1LA0JNW5 1464 aa14.51□□□□□ -0.09
NPC1L1-201ENST00000289547 MSNP26038 577 aaKnown RBP14.51□□□□□ -0.09
NPC1L1-201ENST00000289547 KTN1Q86UP2 1357 aaKnown RBP14.51□□□□□ -0.09
NPC1L1-201ENST00000289547 CENPJQ9HC77 1338 aaPredicted RBP14.51□□□□□ -0.09
NPC1L1-201ENST00000289547 RTF1Q92541 710 aaKnown RBP14.51□□□□□ -0.09
NPC1L1-201ENST00000289547 ABCC5O15440 1437 aa14.5□□□□□ -0.09
NPC1L1-201ENST00000289547 ARID3AQ99856 593 aa14.5□□□□□ -0.09
NPC1L1-201ENST00000289547 TCERG1O14776 1098 aaKnown RBP14.5□□□□□ -0.09
NPC1L1-201ENST00000289547 USP35Q9P2H5 1018 aa14.5□□□□□ -0.09
NPC1L1-201ENST00000289547 COG3Q96JB2 828 aa14.49□□□□□ -0.09
NPC1L1-201ENST00000289547 ANKRD30BQ9BXX2 1392 aa14.49□□□□□ -0.09
NPC1L1-201ENST00000289547 CEBPAP49715 358 aaPredicted RBP14.49□□□□□ -0.09
NPC1L1-201ENST00000289547 GZF1Q9H116 711 aaPredicted RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms