RNA–Protein interactions for RNA: ENST00000285124.12

PPP4R1-201, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-201ENST00000285124 NUTM2DQ5VT03 806 aaPredicted RBP13.97□□□□□ -0.17
PPP4R1-201ENST00000285124 DUOX2Q9NRD8 1548 aa13.97□□□□□ -0.17
PPP4R1-201ENST00000285124 NBPF8Q3BBV2 869 aa13.97□□□□□ -0.17
PPP4R1-201ENST00000285124 ZFYVE16Q7Z3T8 1539 aa13.97□□□□□ -0.17
PPP4R1-201ENST00000285124 A2MP01023 1474 aa13.97□□□□□ -0.17
PPP4R1-201ENST00000285124 DIEXFQ68CQ4 756 aaKnown RBP13.96□□□□□ -0.17
PPP4R1-201ENST00000285124 POLR3GLQ9BT43 218 aa13.96□□□□□ -0.17
PPP4R1-201ENST00000285124 ESF1Q9H501 851 aaKnown RBP13.96□□□□□ -0.18
PPP4R1-201ENST00000285124 FAM135AQ9P2D6 1515 aa13.94□□□□□ -0.18
PPP4R1-201ENST00000285124 FBXO31Q5XUX0 539 aaPredicted RBP13.94□□□□□ -0.18
PPP4R1-201ENST00000285124 ERBINQ96RT1 1412 aa13.94□□□□□ -0.18
PPP4R1-201ENST00000285124 ACIN1Q9UKV3 1341 aaKnown RBP13.93□□□□□ -0.18
PPP4R1-201ENST00000285124 TEX14Q8IWB6 1497 aa13.93□□□□□ -0.18
PPP4R1-201ENST00000285124 CNGB1Q14028 1251 aaPredicted RBP13.93□□□□□ -0.18
PPP4R1-201ENST00000285124 CCDC144AA2RUR9 1427 aa13.92□□□□□ -0.18
PPP4R1-201ENST00000285124 TIMELESSQ9UNS1 1208 aa13.92□□□□□ -0.18
PPP4R1-201ENST00000285124 MAP3K4Q9Y6R4 1608 aa13.92□□□□□ -0.18
PPP4R1-201ENST00000285124 GLI2P10070 1586 aa13.91□□□□□ -0.18
PPP4R1-201ENST00000285124 MLH3Q9UHC1 1453 aa13.9□□□□□ -0.18
PPP4R1-201ENST00000285124 MAST1Q9Y2H9 1570 aa13.9□□□□□ -0.18
PPP4R1-201ENST00000285124 KIDINS220Q9ULH0 1771 aa13.9□□□□□ -0.18
PPP4R1-201ENST00000285124 DDX10Q13206 875 aaKnown RBP13.89□□□□□ -0.19
PPP4R1-201ENST00000285124 CEBPAP49715 358 aaPredicted RBP13.88□□□□□ -0.19
PPP4R1-201ENST00000285124 CFAP65Q6ZU64 1925 aaKnown RBP13.88□□□□□ -0.19
PPP4R1-201ENST00000285124 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
PPP4R1-201ENST00000285124 PLXNC1O60486 1568 aa13.87□□□□□ -0.19
PPP4R1-201ENST00000285124 RPRD2Q5VT52 1461 aaKnown RBP13.87□□□□□ -0.19
PPP4R1-201ENST00000285124 HSPA5P11021 654 aaKnown RBP13.87□□□□□ -0.19
PPP4R1-201ENST00000285124 PLA2R1Q13018 1463 aa13.86□□□□□ -0.19
PPP4R1-201ENST00000285124 HECW2Q9P2P5 1572 aa13.86□□□□□ -0.19
PPP4R1-201ENST00000285124 INO80Q9ULG1 1556 aaPredicted RBP13.86□□□□□ -0.19
PPP4R1-201ENST00000285124 NBPF1Q3BBV0 1214 aa13.86□□□□□ -0.19
PPP4R1-201ENST00000285124 CFAP74Q9C0B2 1584 aa13.86□□□□□ -0.19
PPP4R1-201ENST00000285124 CARD11Q9BXL7 1154 aa13.85□□□□□ -0.19
PPP4R1-201ENST00000285124 KIF13AQ9H1H9 1805 aa13.85□□□□□ -0.19
PPP4R1-201ENST00000285124 KDM5CP41229 1560 aa13.84□□□□□ -0.19
PPP4R1-201ENST00000285124 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.19
PPP4R1-201ENST00000285124 ABCA6Q8N139 1617 aa13.83□□□□□ -0.19
PPP4R1-201ENST00000285124 ATP10AO60312 1499 aa13.83□□□□□ -0.2
PPP4R1-201ENST00000285124 IDI1Q13907 227 aa13.83□□□□□ -0.2
PPP4R1-201ENST00000285124 PPRC1Q5VV67 1664 aaKnown RBP13.82□□□□□ -0.2
PPP4R1-201ENST00000285124 FRMPD1Q5SYB0 1578 aa13.81□□□□□ -0.2
PPP4R1-201ENST00000285124 UGGT1Q9NYU2 1555 aa13.8□□□□□ -0.2
PPP4R1-201ENST00000285124 DIP2CQ9Y2E4 1556 aa13.8□□□□□ -0.2
PPP4R1-201ENST00000285124 RICTORQ6R327 1708 aa13.79□□□□□ -0.2
PPP4R1-201ENST00000285124 MIER1Q8N108 512 aa13.79□□□□□ -0.2
PPP4R1-201ENST00000285124 NPATQ14207 1427 aa13.79□□□□□ -0.2
PPP4R1-201ENST00000285124 BCANQ96GW7 911 aa13.78□□□□□ -0.2
PPP4R1-201ENST00000285124 CFAP70Q5T0N1 1121 aa13.77□□□□□ -0.2
PPP4R1-201ENST00000285124 UNC13BO14795 1591 aa13.77□□□□□ -0.2
PPP4R1-201ENST00000285124 KDM5DQ9BY66 1539 aa13.77□□□□□ -0.2
PPP4R1-201ENST00000285124 ST20-MTHFSA0A0A6YYL1 179 aa13.77□□□□□ -0.21
PPP4R1-201ENST00000285124 C11orf95C9JLR9 678 aaPredicted RBP13.77□□□□□ -0.21
PPP4R1-201ENST00000285124 ROCK2O75116 1388 aaKnown RBP13.76□□□□□ -0.21
PPP4R1-201ENST00000285124 ADGRF5Q8IZF2 1346 aa13.76□□□□□ -0.21
PPP4R1-201ENST00000285124 TMEM132EQ6IEE7 984 aa13.76□□□□□ -0.21
PPP4R1-201ENST00000285124 PRDM15P57071 1507 aaPredicted RBP13.75□□□□□ -0.21
PPP4R1-201ENST00000285124 YTHDC1Q96MU7 727 aaKnown RBP13.75□□□□□ -0.21
PPP4R1-201ENST00000285124 IQGAP3Q86VI3 1631 aa13.75□□□□□ -0.21
PPP4R1-201ENST00000285124 MAGI2Q86UL8 1455 aa13.74□□□□□ -0.21
PPP4R1-201ENST00000285124 ZMYM3Q14202 1370 aa13.73□□□□□ -0.21
PPP4R1-201ENST00000285124 SAFB2Q14151 953 aaKnown RBP eCLIP13.73□□□□□ -0.21
PPP4R1-201ENST00000285124 STK26Q9P289 416 aa13.73□□□□□ -0.21
PPP4R1-201ENST00000285124 MROH1Q8NDA8 1641 aa13.72□□□□□ -0.21
PPP4R1-201ENST00000285124 E9PCH4 1651 aa13.72□□□□□ -0.21
PPP4R1-201ENST00000285124 CEP152O94986 1710 aa13.71□□□□□ -0.21
PPP4R1-201ENST00000285124 ABCC3O15438 1527 aa13.71□□□□□ -0.21
PPP4R1-201ENST00000285124 TRAK1Q9UPV9 953 aa13.7□□□□□ -0.22
PPP4R1-201ENST00000285124 USP47Q96K76 1375 aa13.7□□□□□ -0.22
PPP4R1-201ENST00000285124 PTPRTO14522 1441 aa13.69□□□□□ -0.22
PPP4R1-201ENST00000285124 SLC52A1Q9NWF4 448 aa13.69□□□□□ -0.22
PPP4R1-201ENST00000285124 WASHC2AQ641Q2 1341 aa13.69□□□□□ -0.22
PPP4R1-201ENST00000285124 ZMYM4Q5VZL5 1548 aa13.68□□□□□ -0.22
PPP4R1-201ENST00000285124 NOS1P29475 1434 aa13.67□□□□□ -0.22
PPP4R1-201ENST00000285124 EFCAB6Q5THR3 1501 aa13.67□□□□□ -0.22
PPP4R1-201ENST00000285124 SPATA31E1Q6ZUB1 1445 aa13.67□□□□□ -0.22
PPP4R1-201ENST00000285124 TET3O43151 1660 aa13.66□□□□□ -0.22
PPP4R1-201ENST00000285124 DEPDC5O75140 1603 aa13.66□□□□□ -0.22
PPP4R1-201ENST00000285124 EIF2AK4Q9P2K8 1649 aaKnown RBP13.66□□□□□ -0.22
PPP4R1-201ENST00000285124 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
PPP4R1-201ENST00000285124 SIGLEC1Q9BZZ2 1709 aa13.65□□□□□ -0.22
PPP4R1-201ENST00000285124 PRAG1Q86YV5 1406 aa13.65□□□□□ -0.22
PPP4R1-201ENST00000285124 CLTCL1P53675 1640 aa13.65□□□□□ -0.22
PPP4R1-201ENST00000285124 VGFO15240 615 aaPredicted RBP13.65□□□□□ -0.22
PPP4R1-201ENST00000285124 PPP6R1Q9UPN7 881 aa13.64□□□□□ -0.23
PPP4R1-201ENST00000285124 TRPM2O94759 1503 aa13.63□□□□□ -0.23
PPP4R1-201ENST00000285124 KIF7Q2M1P5 1343 aa13.63□□□□□ -0.23
PPP4R1-201ENST00000285124 ARHGEF40Q8TER5 1519 aa13.62□□□□□ -0.23
PPP4R1-201ENST00000285124 CNTLNQ9NXG0 1405 aa13.62□□□□□ -0.23
PPP4R1-201ENST00000285124 RNF17Q9BXT8 1623 aaKnown RBP13.62□□□□□ -0.23
PPP4R1-201ENST00000285124 LMTK2Q8IWU2 1503 aa13.6□□□□□ -0.23
PPP4R1-201ENST00000285124 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
PPP4R1-201ENST00000285124 SPHKAPQ2M3C7 1700 aa13.6□□□□□ -0.23
PPP4R1-201ENST00000285124 TNRQ92752 1358 aa13.59□□□□□ -0.23
PPP4R1-201ENST00000285124 ANP32CO43423 234 aa13.59□□□□□ -0.23
PPP4R1-201ENST00000285124 CLTCQ00610 1675 aaKnown RBP13.59□□□□□ -0.23
PPP4R1-201ENST00000285124 TXNDC2Q86VQ3 553 aa13.58□□□□□ -0.24
PPP4R1-201ENST00000285124 CAMSAP1Q5T5Y3 1602 aa13.58□□□□□ -0.24
PPP4R1-201ENST00000285124 UHRF1BP1Q6BDS2 1440 aa13.58□□□□□ -0.24
PPP4R1-201ENST00000285124 ERVK-7P63135 1459 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms