RNA–Protein interactions for RNA: ENST00000280704.8

LDHC-201, Transcript of lactate dehydrogenase C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHC, Length 1,256 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-201ENST00000280704 KCNH8Q96L42 1107 aa11.2□□□□□ -0.62
LDHC-201ENST00000280704 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
LDHC-201ENST00000280704 A0A0G2JS52 829 aa11.17□□□□□ -0.62
LDHC-201ENST00000280704 FOSBP53539 338 aa11.16□□□□□ -0.62
LDHC-201ENST00000280704 ZBED2Q9BTP6 218 aa11.16□□□□□ -0.62
LDHC-201ENST00000280704 HS6ST3Q8IZP7 471 aa11.15□□□□□ -0.62
LDHC-201ENST00000280704 IRX2Q9BZI1 471 aaPredicted RBP11.15□□□□□ -0.62
LDHC-201ENST00000280704 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
LDHC-201ENST00000280704 BAZ1BQ9UIG0 1483 aaKnown RBP11.12□□□□□ -0.63
LDHC-201ENST00000280704 WNT2BQ93097 391 aa11.12□□□□□ -0.63
LDHC-201ENST00000280704 CRISPLD2Q9H0B8 497 aa11.12□□□□□ -0.63
LDHC-201ENST00000280704 SOCS7O14512 581 aa11.11□□□□□ -0.63
LDHC-201ENST00000280704 PTPREP23469 700 aa11.11□□□□□ -0.63
LDHC-201ENST00000280704 FBXO41Q8TF61 875 aa11.11□□□□□ -0.63
LDHC-201ENST00000280704 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
LDHC-201ENST00000280704 CADPSQ9ULU8 1353 aa11.08□□□□□ -0.64
LDHC-201ENST00000280704 NKX1-1Q15270 411 aaPredicted RBP11.08□□□□□ -0.64
LDHC-201ENST00000280704 PPP1R15BQ5SWA1 713 aa11.08□□□□□ -0.64
LDHC-201ENST00000280704 MRPL50Q8N5N7 158 aaKnown RBP11.08□□□□□ -0.64
LDHC-201ENST00000280704 ADAM33Q9BZ11 813 aa11.08□□□□□ -0.64
LDHC-201ENST00000280704 GOLGA8CPA6NN73 597 aa11.07□□□□□ -0.64
LDHC-201ENST00000280704 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
LDHC-201ENST00000280704 RSF1Q96T23 1441 aaPredicted RBP11.07□□□□□ -0.64
LDHC-201ENST00000280704 CEP164Q9UPV0 1460 aa11.06□□□□□ -0.64
LDHC-201ENST00000280704 NCKAP5LQ9HCH0 1330 aa11.05□□□□□ -0.64
LDHC-201ENST00000280704 ZDHHC16Q969W1 377 aa11.03□□□□□ -0.64
LDHC-201ENST00000280704 ERCC6L2Q5T890 1561 aa11.03□□□□□ -0.64
LDHC-201ENST00000280704 SMARCA4P51532 1647 aa11.02□□□□□ -0.64
LDHC-201ENST00000280704 EVI5O60447 810 aa11.02□□□□□ -0.65
LDHC-201ENST00000280704 NBPF3Q9H094 633 aa11.01□□□□□ -0.65
LDHC-201ENST00000280704 ITGBL1O95965 494 aaPredicted RBP11□□□□□ -0.65
LDHC-201ENST00000280704 CHGAP10645 457 aaKnown RBP11□□□□□ -0.65
LDHC-201ENST00000280704 ILDR2Q71H61 639 aa11□□□□□ -0.65
LDHC-201ENST00000280704 CHD1O14646 1710 aa10.98□□□□□ -0.65
LDHC-201ENST00000280704 PROX2Q3B8N5 592 aa10.98□□□□□ -0.65
LDHC-201ENST00000280704 ZNF608Q9ULD9 1512 aaPredicted RBP10.97□□□□□ -0.65
LDHC-201ENST00000280704 FANCD2Q9BXW9 1451 aa10.96□□□□□ -0.65
LDHC-201ENST00000280704 COL9A1P20849 921 aa10.96□□□□□ -0.65
LDHC-201ENST00000280704 PPP1R3GB7ZBB8 358 aa10.95□□□□□ -0.66
LDHC-201ENST00000280704 BCAMP50895 628 aa10.95□□□□□ -0.66
LDHC-201ENST00000280704 RABGEF1Q9UJ41 708 aa10.95□□□□□ -0.66
LDHC-201ENST00000280704 URB2Q14146 1524 aaKnown RBP10.94□□□□□ -0.66
LDHC-201ENST00000280704 PDE4AP27815 886 aa10.93□□□□□ -0.66
LDHC-201ENST00000280704 ANKK1Q8NFD2 765 aa10.93□□□□□ -0.66
LDHC-201ENST00000280704 PCDHGA10Q9Y5H3 936 aa10.93□□□□□ -0.66
LDHC-201ENST00000280704 HECW2Q9P2P5 1572 aa10.93□□□□□ -0.66
LDHC-201ENST00000280704 PEG3Q9GZU2 1588 aa10.91□□□□□ -0.66
LDHC-201ENST00000280704 AMER1Q5JTC6 1135 aaPredicted RBP10.91□□□□□ -0.66
LDHC-201ENST00000280704 SOWAHBA6NEL2 793 aa10.9□□□□□ -0.66
LDHC-201ENST00000280704 Q6ZNB5 142 aa10.9□□□□□ -0.66
LDHC-201ENST00000280704 EMILIN3Q9NT22 766 aa10.9□□□□□ -0.66
LDHC-201ENST00000280704 LARP6Q9BRS8 491 aaKnown RBP10.89□□□□□ -0.67
LDHC-201ENST00000280704 LCE2BO14633 110 aa10.88□□□□□ -0.67
LDHC-201ENST00000280704 MAP3K9P80192 1104 aa10.88□□□□□ -0.67
LDHC-201ENST00000280704 RTN4Q9NQC3 1192 aaKnown RBP10.88□□□□□ -0.67
LDHC-201ENST00000280704 RYDENQ9NUL5 291 aaKnown RBP10.88□□□□□ -0.67
LDHC-201ENST00000280704 IFT140Q96RY7 1462 aa10.87□□□□□ -0.67
LDHC-201ENST00000280704 MFSD10Q14728 455 aa10.87□□□□□ -0.67
LDHC-201ENST00000280704 DDX27Q96GQ7 796 aaKnown RBP10.87□□□□□ -0.67
LDHC-201ENST00000280704 WBP1LQ9NX94 342 aa10.87□□□□□ -0.67
LDHC-201ENST00000280704 LAPTM4BQ86VI4 370 aa10.86□□□□□ -0.67
LDHC-201ENST00000280704 ZFRQ96KR1 1074 aaKnown RBP10.86□□□□□ -0.67
LDHC-201ENST00000280704 DISP3Q9P2K9 1392 aa10.86□□□□□ -0.67
LDHC-201ENST00000280704 KIAA1468Q9P260 1216 aa10.85□□□□□ -0.67
LDHC-201ENST00000280704 EIF4G3O43432 1585 aaKnown RBP10.85□□□□□ -0.67
LDHC-201ENST00000280704 KIF13AQ9H1H9 1805 aa10.84□□□□□ -0.67
LDHC-201ENST00000280704 GTPBP6O43824 516 aaPredicted RBP10.82□□□□□ -0.68
LDHC-201ENST00000280704 KCNC4Q03721 635 aa10.82□□□□□ -0.68
LDHC-201ENST00000280704 TYW1BQ6NUM6 668 aa10.82□□□□□ -0.68
LDHC-201ENST00000280704 NYAP1Q6ZVC0 841 aa10.82□□□□□ -0.68
LDHC-201ENST00000280704 SEPT9Q9UHD8 586 aaPredicted RBP10.82□□□□□ -0.68
LDHC-201ENST00000280704 PHF14O94880 888 aa10.81□□□□□ -0.68
LDHC-201ENST00000280704 FBXW7Q969H0 707 aa10.81□□□□□ -0.68
LDHC-201ENST00000280704 SYNJ2O15056 1496 aa10.81□□□□□ -0.68
LDHC-201ENST00000280704 CLASP1Q7Z460 1538 aa10.8□□□□□ -0.68
LDHC-201ENST00000280704 GAPVD1Q14C86 1478 aa10.8□□□□□ -0.68
LDHC-201ENST00000280704 ONECUT3O60422 494 aaPredicted RBP10.78□□□□□ -0.68
LDHC-201ENST00000280704 C6orf132Q5T0Z8 1188 aa10.76□□□□□ -0.69
LDHC-201ENST00000280704 AQRO60306 1485 aaKnown RBP eCLIP10.75□□□□□ -0.69
LDHC-201ENST00000280704 TRIM6-TRIM34B2RNG4 842 aa10.75□□□□□ -0.69
LDHC-201ENST00000280704 ADGRL1O94910 1474 aa10.74□□□□□ -0.69
LDHC-201ENST00000280704 KDM6BO15054 1643 aa10.74□□□□□ -0.69
LDHC-201ENST00000280704 FAM98CQ17RN3 349 aaKnown RBP10.74□□□□□ -0.69
LDHC-201ENST00000280704 CADPS2Q86UW7 1296 aa10.74□□□□□ -0.69
LDHC-201ENST00000280704 HPS5Q9UPZ3 1129 aa10.74□□□□□ -0.69
LDHC-201ENST00000280704 CFTRP13569 1480 aa10.74□□□□□ -0.69
LDHC-201ENST00000280704 DAXXQ9UER7 740 aaPredicted RBP10.73□□□□□ -0.69
LDHC-201ENST00000280704 TSR3Q9UJK0 312 aaKnown RBP10.73□□□□□ -0.69
LDHC-201ENST00000280704 LAPTM4AQ15012 233 aa10.72□□□□□ -0.69
LDHC-201ENST00000280704 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.72□□□□□ -0.69
LDHC-201ENST00000280704 SYNJ1O43426 1573 aa10.72□□□□□ -0.69
LDHC-201ENST00000280704 GFRA3O60609 400 aa10.71□□□□□ -0.69
LDHC-201ENST00000280704 TRAF7Q6Q0C0 670 aa10.71□□□□□ -0.69
LDHC-201ENST00000280704 LRCH3Q96II8 777 aa10.7□□□□□ -0.7
LDHC-201ENST00000280704 EPAS1Q99814 870 aa10.7□□□□□ -0.7
LDHC-201ENST00000280704 FAM69CQ0P6D2 419 aa10.68□□□□□ -0.7
LDHC-201ENST00000280704 RBM33Q96EV2 1170 aaKnown RBP10.68□□□□□ -0.7
LDHC-201ENST00000280704 MROH2BQ7Z745 1585 aa10.68□□□□□ -0.7
LDHC-201ENST00000280704 CAMK2BQ13554 666 aa10.67□□□□□ -0.7
LDHC-201ENST00000280704 TSKSQ9UJT2 592 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms