RNA–Protein interactions for RNA: ENST00000278544.9

ACER3-201, Transcript of alkaline ceramidase 3, humanhuman

TSL 1 (best)

Gene ACER3, Length 3,500 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACER3-201ENST00000278544 KIDINS220Q9ULH0 1771 aa19.05■□□□□ 0.64
ACER3-201ENST00000278544 RTEL1-TNFRSF6BF6WH68 1400 aa19.05■□□□□ 0.64
ACER3-201ENST00000278544 FAM135AQ9P2D6 1515 aa19.05■□□□□ 0.64
ACER3-201ENST00000278544 KIF13AQ9H1H9 1805 aa19.05■□□□□ 0.64
ACER3-201ENST00000278544 ZNF316A6NFI3 1004 aaPredicted RBP19.05■□□□□ 0.64
ACER3-201ENST00000278544 A2MP01023 1474 aa19.05■□□□□ 0.64
ACER3-201ENST00000278544 DCAF11Q8TEB1 546 aa19.04■□□□□ 0.64
ACER3-201ENST00000278544 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
ACER3-201ENST00000278544 GLI2P10070 1586 aa19.02■□□□□ 0.64
ACER3-201ENST00000278544 ERBINQ96RT1 1412 aa19.02■□□□□ 0.63
ACER3-201ENST00000278544 KANK1Q14678 1352 aa19.01■□□□□ 0.63
ACER3-201ENST00000278544 TEX14Q8IWB6 1497 aa19.01■□□□□ 0.63
ACER3-201ENST00000278544 PLXNC1O60486 1568 aa19.01■□□□□ 0.63
ACER3-201ENST00000278544 INO80Q9ULG1 1556 aaPredicted RBP19.01■□□□□ 0.63
ACER3-201ENST00000278544 NBPF8Q3BBV2 869 aa19■□□□□ 0.63
ACER3-201ENST00000278544 NUTM2DQ5VT03 806 aaPredicted RBP19■□□□□ 0.63
ACER3-201ENST00000278544 PPRC1Q5VV67 1664 aaKnown RBP18.99■□□□□ 0.63
ACER3-201ENST00000278544 CFAP74Q9C0B2 1584 aa18.99■□□□□ 0.63
ACER3-201ENST00000278544 HECW2Q9P2P5 1572 aa18.99■□□□□ 0.63
ACER3-201ENST00000278544 MLH3Q9UHC1 1453 aa18.97■□□□□ 0.63
ACER3-201ENST00000278544 ABCA6Q8N139 1617 aa18.97■□□□□ 0.63
ACER3-201ENST00000278544 CCDC144AA2RUR9 1427 aa18.96■□□□□ 0.63
ACER3-201ENST00000278544 FBXO31Q5XUX0 539 aaPredicted RBP18.96■□□□□ 0.63
ACER3-201ENST00000278544 POLR3GLQ9BT43 218 aa18.95■□□□□ 0.62
ACER3-201ENST00000278544 KDM5CP41229 1560 aa18.95■□□□□ 0.62
ACER3-201ENST00000278544 DIEXFQ68CQ4 756 aaKnown RBP18.95■□□□□ 0.62
ACER3-201ENST00000278544 RICTORQ6R327 1708 aa18.94■□□□□ 0.62
ACER3-201ENST00000278544 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
ACER3-201ENST00000278544 FRMPD1Q5SYB0 1578 aa18.93■□□□□ 0.62
ACER3-201ENST00000278544 RPRD2Q5VT52 1461 aaKnown RBP18.92■□□□□ 0.62
ACER3-201ENST00000278544 PLA2R1Q13018 1463 aa18.92■□□□□ 0.62
ACER3-201ENST00000278544 CNGB1Q14028 1251 aaPredicted RBP18.91■□□□□ 0.62
ACER3-201ENST00000278544 DIP2CQ9Y2E4 1556 aa18.91■□□□□ 0.62
ACER3-201ENST00000278544 UGGT1Q9NYU2 1555 aa18.89■□□□□ 0.61
ACER3-201ENST00000278544 ACIN1Q9UKV3 1341 aaKnown RBP18.89■□□□□ 0.61
ACER3-201ENST00000278544 CEBPAP49715 358 aaPredicted RBP18.89■□□□□ 0.61
ACER3-201ENST00000278544 TIMELESSQ9UNS1 1208 aa18.87■□□□□ 0.61
ACER3-201ENST00000278544 UNC13BO14795 1591 aa18.87■□□□□ 0.61
ACER3-201ENST00000278544 ATP10AO60312 1499 aa18.86■□□□□ 0.61
ACER3-201ENST00000278544 DDX10Q13206 875 aaKnown RBP18.86■□□□□ 0.61
ACER3-201ENST00000278544 NBPF1Q3BBV0 1214 aa18.84■□□□□ 0.61
ACER3-201ENST00000278544 HSPA5P11021 654 aaKnown RBP18.84■□□□□ 0.61
ACER3-201ENST00000278544 KDM5DQ9BY66 1539 aa18.84■□□□□ 0.61
ACER3-201ENST00000278544 STAG3Q9UJ98 1225 aa18.83■□□□□ 0.61
ACER3-201ENST00000278544 IQGAP3Q86VI3 1631 aa18.83■□□□□ 0.61
ACER3-201ENST00000278544 CEP152O94986 1710 aa18.83■□□□□ 0.6
ACER3-201ENST00000278544 NPATQ14207 1427 aa18.82■□□□□ 0.6
ACER3-201ENST00000278544 MROH1Q8NDA8 1641 aa18.82■□□□□ 0.6
ACER3-201ENST00000278544 E9PCH4 1651 aa18.81■□□□□ 0.6
ACER3-201ENST00000278544 CARD11Q9BXL7 1154 aa18.81■□□□□ 0.6
ACER3-201ENST00000278544 MAGI2Q86UL8 1455 aa18.8■□□□□ 0.6
ACER3-201ENST00000278544 IDI1Q13907 227 aa18.8■□□□□ 0.6
ACER3-201ENST00000278544 PRDM15P57071 1507 aaPredicted RBP18.79■□□□□ 0.6
ACER3-201ENST00000278544 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
ACER3-201ENST00000278544 SIGLEC1Q9BZZ2 1709 aa18.78■□□□□ 0.6
ACER3-201ENST00000278544 ABCC3O15438 1527 aa18.75■□□□□ 0.59
ACER3-201ENST00000278544 DEPDC5O75140 1603 aa18.73■□□□□ 0.59
ACER3-201ENST00000278544 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
ACER3-201ENST00000278544 C11orf95C9JLR9 678 aaPredicted RBP18.73■□□□□ 0.59
ACER3-201ENST00000278544 MIER1Q8N108 512 aa18.73■□□□□ 0.59
ACER3-201ENST00000278544 ADGRF5Q8IZF2 1346 aa18.73■□□□□ 0.59
ACER3-201ENST00000278544 ROCK2O75116 1388 aaKnown RBP18.73■□□□□ 0.59
ACER3-201ENST00000278544 CFAP70Q5T0N1 1121 aa18.72■□□□□ 0.59
ACER3-201ENST00000278544 EIF2AK4Q9P2K8 1649 aaKnown RBP18.72■□□□□ 0.59
ACER3-201ENST00000278544 TET3O43151 1660 aa18.71■□□□□ 0.59
ACER3-201ENST00000278544 EFCAB6Q5THR3 1501 aa18.71■□□□□ 0.59
ACER3-201ENST00000278544 TMEM132EQ6IEE7 984 aa18.7■□□□□ 0.58
ACER3-201ENST00000278544 ST20-MTHFSA0A0A6YYL1 179 aa18.7■□□□□ 0.58
ACER3-201ENST00000278544 BCANQ96GW7 911 aa18.7■□□□□ 0.58
ACER3-201ENST00000278544 CLTCL1P53675 1640 aa18.7■□□□□ 0.58
ACER3-201ENST00000278544 VWDEQ8N2E2 1590 aa18.69■□□□□ 0.58
ACER3-201ENST00000278544 ZMYM3Q14202 1370 aa18.68■□□□□ 0.58
ACER3-201ENST00000278544 YTHDC1Q96MU7 727 aaKnown RBP18.68■□□□□ 0.58
ACER3-201ENST00000278544 ARHGEF40Q8TER5 1519 aa18.67■□□□□ 0.58
ACER3-201ENST00000278544 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
ACER3-201ENST00000278544 PTPRTO14522 1441 aa18.67■□□□□ 0.58
ACER3-201ENST00000278544 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
ACER3-201ENST00000278544 USP47Q96K76 1375 aa18.66■□□□□ 0.58
ACER3-201ENST00000278544 SPHKAPQ2M3C7 1700 aa18.66■□□□□ 0.58
ACER3-201ENST00000278544 SPATA31E1Q6ZUB1 1445 aa18.65■□□□□ 0.58
ACER3-201ENST00000278544 STK26Q9P289 416 aa18.65■□□□□ 0.58
ACER3-201ENST00000278544 NOS1P29475 1434 aa18.64■□□□□ 0.57
ACER3-201ENST00000278544 TRPM2O94759 1503 aa18.64■□□□□ 0.57
ACER3-201ENST00000278544 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
ACER3-201ENST00000278544 CAMSAP1Q5T5Y3 1602 aa18.63■□□□□ 0.57
ACER3-201ENST00000278544 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
ACER3-201ENST00000278544 TRAK1Q9UPV9 953 aa18.62■□□□□ 0.57
ACER3-201ENST00000278544 PRAG1Q86YV5 1406 aa18.62■□□□□ 0.57
ACER3-201ENST00000278544 SLC52A1Q9NWF4 448 aa18.59■□□□□ 0.57
ACER3-201ENST00000278544 LMTK2Q8IWU2 1503 aa18.58■□□□□ 0.56
ACER3-201ENST00000278544 CNTLNQ9NXG0 1405 aa18.57■□□□□ 0.56
ACER3-201ENST00000278544 SYNMO15061 1565 aa18.56■□□□□ 0.56
ACER3-201ENST00000278544 KIF7Q2M1P5 1343 aa18.54■□□□□ 0.56
ACER3-201ENST00000278544 ERVK-7P63135 1459 aa18.54■□□□□ 0.56
ACER3-201ENST00000278544 AGLP35573 1532 aa18.54■□□□□ 0.56
ACER3-201ENST00000278544 MROH2AA6NES4 1674 aa18.54■□□□□ 0.56
ACER3-201ENST00000278544 VGFO15240 615 aaPredicted RBP18.52■□□□□ 0.56
ACER3-201ENST00000278544 PPP6R1Q9UPN7 881 aa18.52■□□□□ 0.56
ACER3-201ENST00000278544 UHRF1BP1Q6BDS2 1440 aa18.52■□□□□ 0.55
ACER3-201ENST00000278544 KIF1BO60333 1816 aa18.52■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms