RNA–Protein interactions for RNA: ENST00000277549.9

CACNA1B-201, Transcript of calcium voltage-gated channel subunit alpha1 B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1B, Length 7,158 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1B-201ENST00000277549 FOSBP53539 338 aa25.34■■□□□ 1.65
CACNA1B-201ENST00000277549 NOL10Q9BSC4 688 aaKnown RBP25.33■■□□□ 1.64
CACNA1B-201ENST00000277549 H3BQV1 296 aa25.32■■□□□ 1.64
CACNA1B-201ENST00000277549 IFFO2Q5TF58 517 aa25.32■■□□□ 1.64
CACNA1B-201ENST00000277549 GBP4Q96PP9 640 aa25.32■■□□□ 1.64
CACNA1B-201ENST00000277549 C1orf141Q5JVX7 400 aa25.32■■□□□ 1.64
CACNA1B-201ENST00000277549 CALD1Q05682 793 aaKnown RBP25.32■■□□□ 1.64
CACNA1B-201ENST00000277549 VPS37DQ86XT2 251 aa25.32■■□□□ 1.64
CACNA1B-201ENST00000277549 PCMTD1Q96MG8 357 aaPredicted RBP25.32■■□□□ 1.64
CACNA1B-201ENST00000277549 TPM3P06753 285 aa25.31■■□□□ 1.64
CACNA1B-201ENST00000277549 RWDD1Q9H446 243 aaPredicted RBP25.31■■□□□ 1.64
CACNA1B-201ENST00000277549 AKAP17AQ02040 695 aaKnown RBP25.3■■□□□ 1.64
CACNA1B-201ENST00000277549 TNNT3P45378 269 aaPredicted RBP25.3■■□□□ 1.64
CACNA1B-201ENST00000277549 MCTP1Q6DN14 999 aa25.3■■□□□ 1.64
CACNA1B-201ENST00000277549 APPP05067 770 aa25.29■■□□□ 1.64
CACNA1B-201ENST00000277549 SLC4A3P48751 1232 aa25.29■■□□□ 1.64
CACNA1B-201ENST00000277549 DCAF8L1A6NGE4 600 aa25.29■■□□□ 1.64
CACNA1B-201ENST00000277549 TRAK1Q9UPV9 953 aa25.28■■□□□ 1.64
CACNA1B-201ENST00000277549 CCDC34Q96HJ3 373 aa25.26■■□□□ 1.63
CACNA1B-201ENST00000277549 HNRNPMP52272 730 aaKnown RBP eCLIP25.26■■□□□ 1.63
CACNA1B-201ENST00000277549 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.26■■□□□ 1.63
CACNA1B-201ENST00000277549 KIF16BQ96L93 1317 aa25.26■■□□□ 1.63
CACNA1B-201ENST00000277549 WASHC2CQ9Y4E1 1318 aa25.26■■□□□ 1.63
CACNA1B-201ENST00000277549 BAZ1BQ9UIG0 1483 aaKnown RBP25.25■■□□□ 1.63
CACNA1B-201ENST00000277549 DEKP35659 375 aaKnown RBP25.24■■□□□ 1.63
CACNA1B-201ENST00000277549 BCL11BQ9C0K0 894 aaPredicted RBP25.24■■□□□ 1.63
CACNA1B-201ENST00000277549 KIF27Q86VH2 1401 aa25.24■■□□□ 1.63
CACNA1B-201ENST00000277549 AMOTL1Q8IY63 956 aa25.24■■□□□ 1.63
CACNA1B-201ENST00000277549 BCL2L13Q9BXK5 485 aa25.23■■□□□ 1.63
CACNA1B-201ENST00000277549 DCAF1Q9Y4B6 1507 aa25.23■■□□□ 1.63
CACNA1B-201ENST00000277549 SYAP1Q96A49 352 aaPredicted RBP25.22■■□□□ 1.63
CACNA1B-201ENST00000277549 FAM184AQ8NB25 1140 aa25.22■■□□□ 1.63
CACNA1B-201ENST00000277549 HMMRO75330 724 aa25.22■■□□□ 1.63
CACNA1B-201ENST00000277549 FAM177BA6PVY3 158 aa25.22■■□□□ 1.63
CACNA1B-201ENST00000277549 CFAP44Q96MT7 982 aa25.21■■□□□ 1.63
CACNA1B-201ENST00000277549 TTC5Q8N0Z6 440 aa25.21■■□□□ 1.63
CACNA1B-201ENST00000277549 RCAN3Q9UKA8 241 aa25.21■■□□□ 1.63
CACNA1B-201ENST00000277549 TERF2IPQ9NYB0 399 aa25.19■■□□□ 1.62
CACNA1B-201ENST00000277549 CCDC43Q96MW1 224 aaKnown RBP25.19■■□□□ 1.62
CACNA1B-201ENST00000277549 TCERG1O14776 1098 aaKnown RBP25.18■■□□□ 1.62
CACNA1B-201ENST00000277549 SYNE3Q6ZMZ3 975 aa25.16■■□□□ 1.62
CACNA1B-201ENST00000277549 TSR1Q2NL82 804 aaKnown RBP25.16■■□□□ 1.62
CACNA1B-201ENST00000277549 ZNF428Q96B54 188 aa25.16■■□□□ 1.62
CACNA1B-201ENST00000277549 NUTM2GQ5VZR2 741 aa25.15■■□□□ 1.62
CACNA1B-201ENST00000277549 TPM2P07951 284 aa25.14■■□□□ 1.62
CACNA1B-201ENST00000277549 PLIN1O60240 522 aa25.14■■□□□ 1.62
CACNA1B-201ENST00000277549 RBM33Q96EV2 1170 aaKnown RBP25.14■■□□□ 1.61
CACNA1B-201ENST00000277549 WRNQ14191 1432 aaPredicted RBP eCLIP25.14■■□□□ 1.61
CACNA1B-201ENST00000277549 USP35Q9P2H5 1018 aa25.13■■□□□ 1.61
CACNA1B-201ENST00000277549 NUP155O75694 1391 aa25.13■■□□□ 1.61
CACNA1B-201ENST00000277549 CCDC27Q2M243 656 aa25.13■■□□□ 1.61
CACNA1B-201ENST00000277549 IBSPP21815 317 aaPredicted RBP25.12■■□□□ 1.61
CACNA1B-201ENST00000277549 PMFBP1Q8TBY8 1022 aa25.12■■□□□ 1.61
CACNA1B-201ENST00000277549 NFXL1Q6ZNB6 911 aa25.11■■□□□ 1.61
CACNA1B-201ENST00000277549 ZNF592Q92610 1267 aa25.11■■□□□ 1.61
CACNA1B-201ENST00000277549 CSPP1Q1MSJ5 1256 aa25.1■■□□□ 1.61
CACNA1B-201ENST00000277549 TMEM132AQ24JP5 1023 aa25.1■■□□□ 1.61
CACNA1B-201ENST00000277549 ANKRD45Q5TZF3 282 aa25.09■■□□□ 1.61
CACNA1B-201ENST00000277549 PSME1Q06323 249 aa25.09■■□□□ 1.61
CACNA1B-201ENST00000277549 CYB5RLQ6IPT4 315 aa25.09■■□□□ 1.61
CACNA1B-201ENST00000277549 TEFQ10587 303 aa25.08■■□□□ 1.61
CACNA1B-201ENST00000277549 IKQ13123 557 aaPredicted RBP25.08■■□□□ 1.61
CACNA1B-201ENST00000277549 C9orf78Q9NZ63 289 aaPredicted RBP25.08■■□□□ 1.61
CACNA1B-201ENST00000277549 ANO2Q9NQ90 1003 aa25.06■■□□□ 1.6
CACNA1B-201ENST00000277549 MINK1Q8N4C8 1332 aaPredicted RBP25.06■■□□□ 1.6
CACNA1B-201ENST00000277549 PAF1Q8N7H5 531 aa25.06■■□□□ 1.6
CACNA1B-201ENST00000277549 GOLGA6L3A6NEY3 463 aa25.06■■□□□ 1.6
CACNA1B-201ENST00000277549 AIMP1Q12904 312 aaKnown RBP25.05■■□□□ 1.6
CACNA1B-201ENST00000277549 TRIM29Q14134 588 aa25.05■■□□□ 1.6
CACNA1B-201ENST00000277549 ZFYVE27Q5T4F4 411 aa25.05■■□□□ 1.6
CACNA1B-201ENST00000277549 CCAR1Q8IX12 1150 aaKnown RBP25.05■■□□□ 1.6
CACNA1B-201ENST00000277549 COG3Q96JB2 828 aa25.04■■□□□ 1.6
CACNA1B-201ENST00000277549 CENPJQ9HC77 1338 aaPredicted RBP25.04■■□□□ 1.6
CACNA1B-201ENST00000277549 NAP1L1P55209 391 aaKnown RBP25.04■■□□□ 1.6
CACNA1B-201ENST00000277549 EIF3AQ14152 1382 aaKnown RBP25.04■■□□□ 1.6
CACNA1B-201ENST00000277549 EEA1Q15075 1411 aa25.02■■□□□ 1.6
CACNA1B-201ENST00000277549 HDAC5Q9UQL6 1122 aa25.02■■□□□ 1.6
CACNA1B-201ENST00000277549 EFCAB2Q5VUJ9 269 aa25.02■■□□□ 1.6
CACNA1B-201ENST00000277549 NUTM2BA6NNL0 878 aaPredicted RBP25.01■■□□□ 1.6
CACNA1B-201ENST00000277549 NUTM2EB1AL46 878 aaPredicted RBP25.01■■□□□ 1.6
CACNA1B-201ENST00000277549 ST18O60284 1047 aa25.01■■□□□ 1.6
CACNA1B-201ENST00000277549 NUTM2AQ8IVF1 878 aaPredicted RBP25.01■■□□□ 1.6
CACNA1B-201ENST00000277549 CUX2O14529 1486 aa25.01■■□□□ 1.59
CACNA1B-201ENST00000277549 DIAPH3Q9NSV4 1193 aa25■■□□□ 1.59
CACNA1B-201ENST00000277549 GOLGA6L19H0YKK7 550 aa25■■□□□ 1.59
CACNA1B-201ENST00000277549 STK11IPQ8N1F8 1099 aa25■■□□□ 1.59
CACNA1B-201ENST00000277549 NEXNQ0ZGT2 675 aa24.99■■□□□ 1.59
CACNA1B-201ENST00000277549 PTMSP20962 102 aa24.99■■□□□ 1.59
CACNA1B-201ENST00000277549 PIP4K2BP78356 416 aa24.99■■□□□ 1.59
CACNA1B-201ENST00000277549 LMOD3Q0VAK6 560 aa24.98■■□□□ 1.59
CACNA1B-201ENST00000277549 CT47A1Q5JQC4 288 aaPredicted RBP24.98■■□□□ 1.59
CACNA1B-201ENST00000277549 SKIDA1Q1XH10 827 aa24.98■■□□□ 1.59
CACNA1B-201ENST00000277549 MPHOSPH9Q99550 1183 aa24.98■■□□□ 1.59
CACNA1B-201ENST00000277549 BECN2A8MW95 431 aa24.97■■□□□ 1.59
CACNA1B-201ENST00000277549 VSIG10Q8N0Z9 540 aa24.97■■□□□ 1.59
CACNA1B-201ENST00000277549 CHMP4AQ9BY43 222 aa24.96■■□□□ 1.59
CACNA1B-201ENST00000277549 ODF2Q5BJF6 829 aa24.96■■□□□ 1.59
CACNA1B-201ENST00000277549 TPM1P09493 284 aa24.95■■□□□ 1.59
CACNA1B-201ENST00000277549 CARMIL1Q5VZK9 1371 aa24.95■■□□□ 1.58
CACNA1B-201ENST00000277549 RB1CC1Q8TDY2 1594 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms