RNA–Protein interactions for RNA: ENST00000275233.11

SHPRH-201, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHPRH, Length 6,649 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-201ENST00000275233 ELL2O00472 640 aaPredicted RBP14.88□□□□□ -0.03
SHPRH-201ENST00000275233 L1TD1Q5T7N2 865 aaKnown RBP14.88□□□□□ -0.03
SHPRH-201ENST00000275233 NOC3LQ8WTT2 800 aaKnown RBP14.88□□□□□ -0.03
SHPRH-201ENST00000275233 GBP4Q96PP9 640 aa14.87□□□□□ -0.03
SHPRH-201ENST00000275233 VPS8Q8N3P4 1428 aa14.87□□□□□ -0.03
SHPRH-201ENST00000275233 PDS5BQ9NTI5 1447 aa14.86□□□□□ -0.03
SHPRH-201ENST00000275233 EVA1CP58658 441 aa14.86□□□□□ -0.03
SHPRH-201ENST00000275233 PMFBP1Q8TBY8 1022 aa14.86□□□□□ -0.03
SHPRH-201ENST00000275233 L3MBTL2Q969R5 705 aa14.86□□□□□ -0.03
SHPRH-201ENST00000275233 FHOD3Q2V2M9 1422 aa14.85□□□□□ -0.03
SHPRH-201ENST00000275233 BCL2L13Q9BXK5 485 aa14.85□□□□□ -0.03
SHPRH-201ENST00000275233 HMMRO75330 724 aa14.83□□□□□ -0.03
SHPRH-201ENST00000275233 TIMELESSQ9UNS1 1208 aa14.83□□□□□ -0.03
SHPRH-201ENST00000275233 CENPJQ9HC77 1338 aaPredicted RBP14.83□□□□□ -0.04
SHPRH-201ENST00000275233 NECTIN2Q92692 538 aa14.82□□□□□ -0.04
SHPRH-201ENST00000275233 RILPL2Q969X0 211 aa14.82□□□□□ -0.04
SHPRH-201ENST00000275233 FMN1Q68DA7 1419 aa14.82□□□□□ -0.04
SHPRH-201ENST00000275233 MARCH6O60337 910 aa14.81□□□□□ -0.04
SHPRH-201ENST00000275233 HTATSF1O43719 755 aaKnown RBP14.81□□□□□ -0.04
SHPRH-201ENST00000275233 RAD21O60216 631 aa14.81□□□□□ -0.04
SHPRH-201ENST00000275233 FOXD4L6Q3SYB3 417 aaPredicted RBP14.81□□□□□ -0.04
SHPRH-201ENST00000275233 FOXD4L3Q6VB84 417 aaPredicted RBP14.81□□□□□ -0.04
SHPRH-201ENST00000275233 MROH2BQ7Z745 1585 aa14.81□□□□□ -0.04
SHPRH-201ENST00000275233 CYB5RLQ6IPT4 315 aa14.8□□□□□ -0.04
SHPRH-201ENST00000275233 C1orf141Q5JVX7 400 aa14.8□□□□□ -0.04
SHPRH-201ENST00000275233 SYTL4Q96C24 671 aaPredicted RBP14.8□□□□□ -0.04
SHPRH-201ENST00000275233 TPM4P67936 248 aa14.79□□□□□ -0.04
SHPRH-201ENST00000275233 PANK3Q9H999 370 aa14.79□□□□□ -0.04
SHPRH-201ENST00000275233 EIF2S2P20042 333 aaKnown RBP14.79□□□□□ -0.04
SHPRH-201ENST00000275233 MINK1Q8N4C8 1332 aaPredicted RBP14.78□□□□□ -0.04
SHPRH-201ENST00000275233 PLIN1O60240 522 aa14.78□□□□□ -0.04
SHPRH-201ENST00000275233 LMOD3Q0VAK6 560 aa14.78□□□□□ -0.04
SHPRH-201ENST00000275233 WWC1Q8IX03 1113 aa14.77□□□□□ -0.04
SHPRH-201ENST00000275233 PES1O00541 588 aaKnown RBP14.77□□□□□ -0.05
SHPRH-201ENST00000275233 SYAP1Q96A49 352 aaPredicted RBP14.77□□□□□ -0.05
SHPRH-201ENST00000275233 JPH4Q96JJ6 628 aa14.77□□□□□ -0.05
SHPRH-201ENST00000275233 COG3Q96JB2 828 aa14.76□□□□□ -0.05
SHPRH-201ENST00000275233 TCERG1O14776 1098 aaKnown RBP14.76□□□□□ -0.05
SHPRH-201ENST00000275233 ST20-MTHFSA0A0A6YYL1 179 aa14.76□□□□□ -0.05
SHPRH-201ENST00000275233 MEX3CQ5U5Q3 659 aaKnown RBP14.76□□□□□ -0.05
SHPRH-201ENST00000275233 FBXW7Q969H0 707 aa14.76□□□□□ -0.05
SHPRH-201ENST00000275233 CHMP4AQ9BY43 222 aa14.76□□□□□ -0.05
SHPRH-201ENST00000275233 ANKRD45Q5TZF3 282 aa14.75□□□□□ -0.05
SHPRH-201ENST00000275233 KIF16BQ96L93 1317 aa14.75□□□□□ -0.05
SHPRH-201ENST00000275233 SF3A1Q15459 793 aaKnown RBP14.75□□□□□ -0.05
SHPRH-201ENST00000275233 A0A0U1RQG5 324 aaPredicted RBP14.74□□□□□ -0.05
SHPRH-201ENST00000275233 HDAC5Q9UQL6 1122 aa14.74□□□□□ -0.05
SHPRH-201ENST00000275233 WIZO95785 1651 aa14.74□□□□□ -0.05
SHPRH-201ENST00000275233 KLHL34Q8N239 644 aa14.74□□□□□ -0.05
SHPRH-201ENST00000275233 NLRP13Q86W25 1043 aa14.73□□□□□ -0.05
SHPRH-201ENST00000275233 CCDC18Q5T9S5 1454 aa14.73□□□□□ -0.05
SHPRH-201ENST00000275233 PTMSP20962 102 aa14.73□□□□□ -0.05
SHPRH-201ENST00000275233 SMARCA2P51531 1590 aa14.73□□□□□ -0.05
SHPRH-201ENST00000275233 H3BQV1 296 aa14.72□□□□□ -0.05
SHPRH-201ENST00000275233 IFFO2Q5TF58 517 aa14.72□□□□□ -0.05
SHPRH-201ENST00000275233 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.72□□□□□ -0.05
SHPRH-201ENST00000275233 TEFQ10587 303 aa14.71□□□□□ -0.05
SHPRH-201ENST00000275233 TTC5Q8N0Z6 440 aa14.71□□□□□ -0.05
SHPRH-201ENST00000275233 GOLGA6L3A6NEY3 463 aa14.71□□□□□ -0.06
SHPRH-201ENST00000275233 CCDC144AA2RUR9 1427 aa14.7□□□□□ -0.06
SHPRH-201ENST00000275233 CCDC34Q96HJ3 373 aa14.7□□□□□ -0.06
SHPRH-201ENST00000275233 SLC4A3P48751 1232 aa14.7□□□□□ -0.06
SHPRH-201ENST00000275233 ST18O60284 1047 aa14.7□□□□□ -0.06
SHPRH-201ENST00000275233 PSME1Q06323 249 aa14.69□□□□□ -0.06
SHPRH-201ENST00000275233 CSPP1Q1MSJ5 1256 aa14.69□□□□□ -0.06
SHPRH-201ENST00000275233 TPD52L1Q16890 204 aaPredicted RBP14.69□□□□□ -0.06
SHPRH-201ENST00000275233 FAM184AQ8NB25 1140 aa14.69□□□□□ -0.06
SHPRH-201ENST00000275233 KIF15Q9NS87 1388 aa14.69□□□□□ -0.06
SHPRH-201ENST00000275233 RAPGEF2Q9Y4G8 1499 aa14.69□□□□□ -0.06
SHPRH-201ENST00000275233 MCTP1Q6DN14 999 aa14.68□□□□□ -0.06
SHPRH-201ENST00000275233 AEBP2Q6ZN18 517 aaPredicted RBP14.68□□□□□ -0.06
SHPRH-201ENST00000275233 SAMD1Q6SPF0 538 aaPredicted RBP14.68□□□□□ -0.06
SHPRH-201ENST00000275233 TRIM34Q9BYJ4 488 aa14.68□□□□□ -0.06
SHPRH-201ENST00000275233 C9orf78Q9NZ63 289 aaPredicted RBP14.68□□□□□ -0.06
SHPRH-201ENST00000275233 NUTM2GQ5VZR2 741 aa14.67□□□□□ -0.06
SHPRH-201ENST00000275233 EVC2Q86UK5 1308 aa14.67□□□□□ -0.06
SHPRH-201ENST00000275233 AKAP17AQ02040 695 aaKnown RBP14.67□□□□□ -0.06
SHPRH-201ENST00000275233 APPP05067 770 aa14.67□□□□□ -0.06
SHPRH-201ENST00000275233 CGNL1Q0VF96 1302 aa14.67□□□□□ -0.06
SHPRH-201ENST00000275233 MYBBP1AQ9BQG0 1328 aaKnown RBP14.67□□□□□ -0.06
SHPRH-201ENST00000275233 CEP89Q96ST8 783 aa14.66□□□□□ -0.06
SHPRH-201ENST00000275233 COG6Q9Y2V7 657 aa14.66□□□□□ -0.06
SHPRH-201ENST00000275233 CRBNQ96SW2 442 aa14.65□□□□□ -0.06
SHPRH-201ENST00000275233 RSPH4AQ5TD94 716 aa14.65□□□□□ -0.06
SHPRH-201ENST00000275233 VPS37DQ86XT2 251 aa14.65□□□□□ -0.06
SHPRH-201ENST00000275233 VGFO15240 615 aaPredicted RBP14.65□□□□□ -0.06
SHPRH-201ENST00000275233 CTDP1Q9Y5B0 961 aaPredicted RBP14.65□□□□□ -0.06
SHPRH-201ENST00000275233 FOSBP53539 338 aa14.64□□□□□ -0.07
SHPRH-201ENST00000275233 IPO9Q96P70 1041 aaKnown RBP14.64□□□□□ -0.07
SHPRH-201ENST00000275233 NOL10Q9BSC4 688 aaKnown RBP14.64□□□□□ -0.07
SHPRH-201ENST00000275233 NEXNQ0ZGT2 675 aa14.64□□□□□ -0.07
SHPRH-201ENST00000275233 TCEAL9Q9UHQ7 104 aa14.64□□□□□ -0.07
SHPRH-201ENST00000275233 FBXO3Q9UK99 471 aa14.64□□□□□ -0.07
SHPRH-201ENST00000275233 DHX16O60231 1041 aaKnown RBP14.63□□□□□ -0.07
SHPRH-201ENST00000275233 PHF23Q9BUL5 403 aaPredicted RBP14.63□□□□□ -0.07
SHPRH-201ENST00000275233 DIAPH3Q9NSV4 1193 aa14.63□□□□□ -0.07
SHPRH-201ENST00000275233 EXOC6Q8TAG9 804 aa14.63□□□□□ -0.07
SHPRH-201ENST00000275233 APAF1O14727 1248 aa14.63□□□□□ -0.07
SHPRH-201ENST00000275233 TPM3P06753 285 aa14.63□□□□□ -0.07
SHPRH-201ENST00000275233 ZKSCAN2Q63HK3 967 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 117 ms