RNA–Protein interactions for RNA: ENST00000269571.9

ERBB2-201, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERBB2, Length 4,545 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-201ENST00000269571 MORC1Q86VD1 984 aa15.26■□□□□ 0.03
ERBB2-201ENST00000269571 MYBBP1AQ9BQG0 1328 aaKnown RBP15.26■□□□□ 0.03
ERBB2-201ENST00000269571 CDCA7LQ96GN5 454 aa15.26■□□□□ 0.03
ERBB2-201ENST00000269571 GBP4Q96PP9 640 aa15.26■□□□□ 0.03
ERBB2-201ENST00000269571 HMGXB3Q12766 1538 aa15.25■□□□□ 0.03
ERBB2-201ENST00000269571 ITPRIPQ8IWB1 547 aa15.25■□□□□ 0.03
ERBB2-201ENST00000269571 RWDD1Q9H446 243 aaPredicted RBP15.25■□□□□ 0.03
ERBB2-201ENST00000269571 RRP7AQ9Y3A4 280 aaKnown RBP15.25■□□□□ 0.03
ERBB2-201ENST00000269571 PHLDB1Q86UU1 1377 aa15.25■□□□□ 0.03
ERBB2-201ENST00000269571 SRPK2P78362 688 aaKnown RBP15.25■□□□□ 0.03
ERBB2-201ENST00000269571 COG6Q9Y2V7 657 aa15.25■□□□□ 0.03
ERBB2-201ENST00000269571 CASC1Q6TDU7 716 aa15.24■□□□□ 0.03
ERBB2-201ENST00000269571 SPAG9O60271 1321 aaKnown RBP15.24■□□□□ 0.03
ERBB2-201ENST00000269571 CCDC7Q96M83 1385 aa15.24■□□□□ 0.03
ERBB2-201ENST00000269571 LMOD2Q6P5Q4 547 aa15.24■□□□□ 0.03
ERBB2-201ENST00000269571 PANK3Q9H999 370 aa15.24■□□□□ 0.03
ERBB2-201ENST00000269571 SKAP1Q86WV1 359 aa15.23■□□□□ 0.03
ERBB2-201ENST00000269571 CYB5RLQ6IPT4 315 aa15.22■□□□□ 0.03
ERBB2-201ENST00000269571 STK26Q9P289 416 aa15.22■□□□□ 0.03
ERBB2-201ENST00000269571 U2AF1L5P0DN76 240 aaPredicted RBP15.22■□□□□ 0.03
ERBB2-201ENST00000269571 U2AF1Q01081 240 aaKnown RBP eCLIP15.22■□□□□ 0.03
ERBB2-201ENST00000269571 POLA1P09884 1462 aaPredicted RBP15.22■□□□□ 0.03
ERBB2-201ENST00000269571 TOPBP1Q92547 1522 aa15.22■□□□□ 0.03
ERBB2-201ENST00000269571 FAM13BQ9NYF5 915 aa15.22■□□□□ 0.03
ERBB2-201ENST00000269571 PRXQ9BXM0 1461 aa15.21■□□□□ 0.03
ERBB2-201ENST00000269571 KIF15Q9NS87 1388 aa15.21■□□□□ 0.02
ERBB2-201ENST00000269571 TAOK2Q9UL54 1235 aa15.2■□□□□ 0.02
ERBB2-201ENST00000269571 USP47Q96K76 1375 aa15.2■□□□□ 0.02
ERBB2-201ENST00000269571 CENPJQ9HC77 1338 aaPredicted RBP15.2■□□□□ 0.02
ERBB2-201ENST00000269571 FOXD4L5Q5VV16 416 aaPredicted RBP15.2■□□□□ 0.02
ERBB2-201ENST00000269571 FOXD4L4Q8WXT5 416 aaPredicted RBP15.2■□□□□ 0.02
ERBB2-201ENST00000269571 PDE4CQ08493 712 aa15.19■□□□□ 0.02
ERBB2-201ENST00000269571 TOP2BQ02880 1626 aa15.19■□□□□ 0.02
ERBB2-201ENST00000269571 PMFBP1Q8TBY8 1022 aa15.18■□□□□ 0.02
ERBB2-201ENST00000269571 APAF1O14727 1248 aa15.18■□□□□ 0.02
ERBB2-201ENST00000269571 RSPH4AQ5TD94 716 aa15.18■□□□□ 0.02
ERBB2-201ENST00000269571 NUTM2DQ5VT03 806 aaPredicted RBP15.18■□□□□ 0.02
ERBB2-201ENST00000269571 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
ERBB2-201ENST00000269571 SMC4Q9NTJ3 1288 aa15.17■□□□□ 0.02
ERBB2-201ENST00000269571 CNTLNQ9NXG0 1405 aa15.16■□□□□ 0.02
ERBB2-201ENST00000269571 GRIN2BQ13224 1484 aa15.16■□□□□ 0.02
ERBB2-201ENST00000269571 BACH2Q9BYV9 841 aa15.16■□□□□ 0.02
ERBB2-201ENST00000269571 LRRC9Q6ZRR7 1453 aa15.15■□□□□ 0.02
ERBB2-201ENST00000269571 TNNT3P45378 269 aaPredicted RBP15.15■□□□□ 0.02
ERBB2-201ENST00000269571 FGD6Q6ZV73 1430 aa15.15■□□□□ 0.02
ERBB2-201ENST00000269571 CALD1Q05682 793 aaKnown RBP15.15■□□□□ 0.02
ERBB2-201ENST00000269571 NOL8Q76FK4 1167 aaKnown RBP15.15■□□□□ 0.02
ERBB2-201ENST00000269571 CHAF1AQ13111 956 aaPredicted RBP15.14■□□□□ 0.01
ERBB2-201ENST00000269571 ERICH3Q5RHP9 1530 aa15.14■□□□□ 0.01
ERBB2-201ENST00000269571 WDR97A6NE52 1622 aa15.14■□□□□ 0.01
ERBB2-201ENST00000269571 DDX49Q9Y6V7 483 aaKnown RBP15.13■□□□□ 0.01
ERBB2-201ENST00000269571 WASHC2CQ9Y4E1 1318 aa15.13■□□□□ 0.01
ERBB2-201ENST00000269571 FOXD4L6Q3SYB3 417 aaPredicted RBP15.13■□□□□ 0.01
ERBB2-201ENST00000269571 FOXD4L3Q6VB84 417 aaPredicted RBP15.13■□□□□ 0.01
ERBB2-201ENST00000269571 MAP7D2Q96T17 732 aa15.12■□□□□ 0.01
ERBB2-201ENST00000269571 MYOM3Q5VTT5 1437 aa15.11■□□□□ 0.01
ERBB2-201ENST00000269571 TPM2P07951 284 aa15.11■□□□□ 0.01
ERBB2-201ENST00000269571 CASKIN1Q8WXD9 1431 aa15.11■□□□□ 0.01
ERBB2-201ENST00000269571 MRC2Q9UBG0 1479 aa15.11■□□□□ 0.01
ERBB2-201ENST00000269571 NBPF8Q3BBV2 869 aa15.11■□□□□ 0.01
ERBB2-201ENST00000269571 HAP1P54257 671 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-201ENST00000269571 KIAA2012Q0VF49 1180 aa15.1■□□□□ 0.01
ERBB2-201ENST00000269571 OS9Q13438 667 aaPredicted RBP15.1■□□□□ 0.01
ERBB2-201ENST00000269571 DRC7Q8IY82 874 aa15.1■□□□□ 0.01
ERBB2-201ENST00000269571 ZRSR1Q15695 479 aaKnown RBP15.1■□□□□ 0.01
ERBB2-201ENST00000269571 PANK1Q8TE04 598 aa15.09■□□□□ 0.01
ERBB2-201ENST00000269571 IPO8O15397 1037 aaKnown RBP15.09■□□□□ 0.01
ERBB2-201ENST00000269571 DDX11L8A8MPP1 907 aa15.08■□□□□ 0
ERBB2-201ENST00000269571 KCNJ4P48050 445 aa15.08■□□□□ 0
ERBB2-201ENST00000269571 CHMP4BQ9H444 224 aaKnown RBP15.08■□□□□ 0
ERBB2-201ENST00000269571 GOLGA6L4A6NEF3 574 aa15.08■□□□□ 0
ERBB2-201ENST00000269571 NCOA2Q15596 1464 aa15.08■□□□□ 0
ERBB2-201ENST00000269571 ELL2O00472 640 aaPredicted RBP15.07■□□□□ 0
ERBB2-201ENST00000269571 C11orf95C9JLR9 678 aaPredicted RBP15.07■□□□□ 0
ERBB2-201ENST00000269571 RRBP1Q9P2E9 1410 aaKnown RBP15.07■□□□□ 0
ERBB2-201ENST00000269571 PNISRQ8TF01 805 aaKnown RBP15.07■□□□□ 0
ERBB2-201ENST00000269571 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
ERBB2-201ENST00000269571 ADAMTS8Q9UP79 889 aa15.06■□□□□ 0
ERBB2-201ENST00000269571 UACAQ9BZF9 1416 aa15.06■□□□□ 0
ERBB2-201ENST00000269571 PRDM2Q13029 1718 aa15.05■□□□□ 0
ERBB2-201ENST00000269571 CGNL1Q0VF96 1302 aa15.05■□□□□ -0
ERBB2-201ENST00000269571 CHMP5Q9NZZ3 219 aa15.05■□□□□ -0
ERBB2-201ENST00000269571 FGD1P98174 961 aa15.05■□□□□ -0
ERBB2-201ENST00000269571 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.05■□□□□ -0
ERBB2-201ENST00000269571 NAP1L2Q9ULW6 460 aaPredicted RBP15.04■□□□□ -0
ERBB2-201ENST00000269571 CCDC144AA2RUR9 1427 aa15.04■□□□□ -0
ERBB2-201ENST00000269571 ANKRD45Q5TZF3 282 aa15.04■□□□□ -0
ERBB2-201ENST00000269571 E9PSI1 815 aa15.03■□□□□ -0
ERBB2-201ENST00000269571 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
ERBB2-201ENST00000269571 PRG4Q92954 1404 aaPredicted RBP15.03■□□□□ -0
ERBB2-201ENST00000269571 RBM10P98175 930 aaKnown RBP15.03■□□□□ -0
ERBB2-201ENST00000269571 AFAP1Q8N556 730 aa15.03■□□□□ -0
ERBB2-201ENST00000269571 DNMBPQ6XZF7 1577 aa15.03■□□□□ -0
ERBB2-201ENST00000269571 IFT140Q96RY7 1462 aa15.03■□□□□ -0
ERBB2-201ENST00000269571 MTERF4Q7Z6M4 381 aaKnown RBP15.02■□□□□ -0
ERBB2-201ENST00000269571 PTMSP20962 102 aa15.02■□□□□ -0
ERBB2-201ENST00000269571 ZNF771Q7L3S4 317 aaPredicted RBP15.02□□□□□ -0.01
ERBB2-201ENST00000269571 SNAPC4Q5SXM2 1469 aa15.02□□□□□ -0.01
ERBB2-201ENST00000269571 HDGFL2Q7Z4V5 671 aaPredicted RBP15.02□□□□□ -0.01
ERBB2-201ENST00000269571 HDGFP51858 240 aaKnown RBP15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms