RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 HSPA5P11021 654 aaKnown RBP21.92■■□□□ 1.1
MAP1LC3B-201ENST00000268607 ANKRD30BQ9BXX2 1392 aa21.92■■□□□ 1.1
MAP1LC3B-201ENST00000268607 SHANK2Q9UPX8 1470 aa21.89■■□□□ 1.1
MAP1LC3B-201ENST00000268607 PZPP20742 1482 aa21.89■■□□□ 1.09
MAP1LC3B-201ENST00000268607 NBPF8Q3BBV2 869 aa21.88■■□□□ 1.09
MAP1LC3B-201ENST00000268607 TSPOAP1O95153 1857 aa21.87■■□□□ 1.09
MAP1LC3B-201ENST00000268607 SALL2Q9Y467 1007 aaPredicted RBP21.87■■□□□ 1.09
MAP1LC3B-201ENST00000268607 KIF3BO15066 747 aa21.85■■□□□ 1.09
MAP1LC3B-201ENST00000268607 EIF4G2P78344 907 aaKnown RBP eCLIP21.84■■□□□ 1.09
MAP1LC3B-201ENST00000268607 NBR1Q14596 966 aa21.83■■□□□ 1.08
MAP1LC3B-201ENST00000268607 ZNF326Q5BKZ1 582 aaKnown RBP21.82■■□□□ 1.08
MAP1LC3B-201ENST00000268607 WASHC2AQ641Q2 1341 aa21.82■■□□□ 1.08
MAP1LC3B-201ENST00000268607 RPRD2Q5VT52 1461 aaKnown RBP21.81■■□□□ 1.08
MAP1LC3B-201ENST00000268607 C11orf95C9JLR9 678 aaPredicted RBP21.79■■□□□ 1.08
MAP1LC3B-201ENST00000268607 GGT6Q6P531 493 aa21.78■■□□□ 1.08
MAP1LC3B-201ENST00000268607 PPP4R2Q9NY27 417 aa21.77■■□□□ 1.08
MAP1LC3B-201ENST00000268607 ZFYVE16Q7Z3T8 1539 aa21.76■■□□□ 1.07
MAP1LC3B-201ENST00000268607 ARAP3Q8WWN8 1544 aa21.76■■□□□ 1.07
MAP1LC3B-201ENST00000268607 CCDC136Q96JN2 1154 aa21.76■■□□□ 1.07
MAP1LC3B-201ENST00000268607 RGL3Q3MIN7 710 aa21.75■■□□□ 1.07
MAP1LC3B-201ENST00000268607 KDM2AQ9Y2K7 1162 aa21.74■■□□□ 1.07
MAP1LC3B-201ENST00000268607 ATP7AQ04656 1500 aa21.74■■□□□ 1.07
MAP1LC3B-201ENST00000268607 TEX14Q8IWB6 1497 aa21.74■■□□□ 1.07
MAP1LC3B-201ENST00000268607 TRHP20396 242 aaPredicted RBP21.74■■□□□ 1.07
MAP1LC3B-201ENST00000268607 MAST1Q9Y2H9 1570 aa21.72■■□□□ 1.07
MAP1LC3B-201ENST00000268607 DIP2BQ9P265 1576 aa21.72■■□□□ 1.07
MAP1LC3B-201ENST00000268607 ERICH6BQ5W0A0 696 aa21.72■■□□□ 1.07
MAP1LC3B-201ENST00000268607 B4GALNT3Q6L9W6 998 aa21.72■■□□□ 1.07
MAP1LC3B-201ENST00000268607 FAM135AQ9P2D6 1515 aa21.71■■□□□ 1.07
MAP1LC3B-201ENST00000268607 DUOX2Q9NRD8 1548 aa21.71■■□□□ 1.07
MAP1LC3B-201ENST00000268607 ZNF518AQ6AHZ1 1483 aa21.7■■□□□ 1.07
MAP1LC3B-201ENST00000268607 POGZQ7Z3K3 1410 aa21.7■■□□□ 1.06
MAP1LC3B-201ENST00000268607 NOP58Q9Y2X3 529 aaKnown RBP21.69■■□□□ 1.06
MAP1LC3B-201ENST00000268607 PLXNC1O60486 1568 aa21.68■■□□□ 1.06
MAP1LC3B-201ENST00000268607 PAK3O75914 559 aaPredicted RBP21.68■■□□□ 1.06
MAP1LC3B-201ENST00000268607 KIDINS220Q9ULH0 1771 aa21.68■■□□□ 1.06
MAP1LC3B-201ENST00000268607 MAP3K4Q9Y6R4 1608 aa21.68■■□□□ 1.06
MAP1LC3B-201ENST00000268607 YEATS2Q9ULM3 1422 aa21.67■■□□□ 1.06
MAP1LC3B-201ENST00000268607 RTEL1-TNFRSF6BF6WH68 1400 aa21.66■■□□□ 1.06
MAP1LC3B-201ENST00000268607 POLR3GLQ9BT43 218 aa21.65■■□□□ 1.06
MAP1LC3B-201ENST00000268607 DHX29Q7Z478 1369 aaKnown RBP21.65■■□□□ 1.06
MAP1LC3B-201ENST00000268607 CNGB1Q14028 1251 aaPredicted RBP21.65■■□□□ 1.06
MAP1LC3B-201ENST00000268607 CCDC184Q52MB2 194 aa21.65■■□□□ 1.06
MAP1LC3B-201ENST00000268607 INO80Q9ULG1 1556 aaPredicted RBP21.65■■□□□ 1.06
MAP1LC3B-201ENST00000268607 IL27Q8NEV9 243 aa21.64■■□□□ 1.05
MAP1LC3B-201ENST00000268607 ERBINQ96RT1 1412 aa21.64■■□□□ 1.05
MAP1LC3B-201ENST00000268607 MLECQ14165 292 aa21.63■■□□□ 1.05
MAP1LC3B-201ENST00000268607 COL17A1Q9UMD9 1497 aaPredicted RBP21.62■■□□□ 1.05
MAP1LC3B-201ENST00000268607 DCAF11Q8TEB1 546 aa21.62■■□□□ 1.05
MAP1LC3B-201ENST00000268607 NEO1Q92859 1461 aa21.62■■□□□ 1.05
MAP1LC3B-201ENST00000268607 CCDC7Q96M83 1385 aa21.62■■□□□ 1.05
MAP1LC3B-201ENST00000268607 RTN4Q9NQC3 1192 aaKnown RBP21.62■■□□□ 1.05
MAP1LC3B-201ENST00000268607 SENP3Q9H4L4 574 aaPredicted RBP21.61■■□□□ 1.05
MAP1LC3B-201ENST00000268607 CFAP65Q6ZU64 1925 aaKnown RBP21.6■■□□□ 1.05
MAP1LC3B-201ENST00000268607 A2MP01023 1474 aa21.59■■□□□ 1.05
MAP1LC3B-201ENST00000268607 PLA2R1Q13018 1463 aa21.59■■□□□ 1.05
MAP1LC3B-201ENST00000268607 KIF7Q2M1P5 1343 aa21.59■■□□□ 1.05
MAP1LC3B-201ENST00000268607 KIF13AQ9H1H9 1805 aa21.58■■□□□ 1.05
MAP1LC3B-201ENST00000268607 FAM9BQ8IZU0 186 aa21.58■■□□□ 1.04
MAP1LC3B-201ENST00000268607 GLI2P10070 1586 aa21.57■■□□□ 1.04
MAP1LC3B-201ENST00000268607 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.57■■□□□ 1.04
MAP1LC3B-201ENST00000268607 PPRC1Q5VV67 1664 aaKnown RBP21.57■■□□□ 1.04
MAP1LC3B-201ENST00000268607 SPATA31E1Q6ZUB1 1445 aa21.57■■□□□ 1.04
MAP1LC3B-201ENST00000268607 UNC13BO14795 1591 aa21.56■■□□□ 1.04
MAP1LC3B-201ENST00000268607 ABCA6Q8N139 1617 aa21.56■■□□□ 1.04
MAP1LC3B-201ENST00000268607 KDM5DQ9BY66 1539 aa21.55■■□□□ 1.04
MAP1LC3B-201ENST00000268607 KDM5CP41229 1560 aa21.55■■□□□ 1.04
MAP1LC3B-201ENST00000268607 CFAP74Q9C0B2 1584 aa21.55■■□□□ 1.04
MAP1LC3B-201ENST00000268607 WASHC2CQ9Y4E1 1318 aa21.55■■□□□ 1.04
MAP1LC3B-201ENST00000268607 HECW2Q9P2P5 1572 aa21.55■■□□□ 1.04
MAP1LC3B-201ENST00000268607 CNTLNQ9NXG0 1405 aa21.54■■□□□ 1.04
MAP1LC3B-201ENST00000268607 CCDC144AA2RUR9 1427 aa21.54■■□□□ 1.04
MAP1LC3B-201ENST00000268607 MLH3Q9UHC1 1453 aa21.54■■□□□ 1.04
MAP1LC3B-201ENST00000268607 DNAJC5Q9H3Z4 198 aa21.53■■□□□ 1.04
MAP1LC3B-201ENST00000268607 FRMPD1Q5SYB0 1578 aa21.53■■□□□ 1.04
MAP1LC3B-201ENST00000268607 USP47Q96K76 1375 aa21.53■■□□□ 1.04
MAP1LC3B-201ENST00000268607 RICTORQ6R327 1708 aa21.52■■□□□ 1.04
MAP1LC3B-201ENST00000268607 RTL5Q5HYW3 569 aaPredicted RBP21.52■■□□□ 1.03
MAP1LC3B-201ENST00000268607 CARD11Q9BXL7 1154 aa21.52■■□□□ 1.03
MAP1LC3B-201ENST00000268607 KANK1Q14678 1352 aa21.51■■□□□ 1.03
MAP1LC3B-201ENST00000268607 CHGAP10645 457 aaKnown RBP21.51■■□□□ 1.03
MAP1LC3B-201ENST00000268607 PRKRIP1Q9H875 184 aaPredicted RBP21.51■■□□□ 1.03
MAP1LC3B-201ENST00000268607 IQGAP3Q86VI3 1631 aa21.5■■□□□ 1.03
MAP1LC3B-201ENST00000268607 UBE2Q2Q8WVN8 375 aa21.49■■□□□ 1.03
MAP1LC3B-201ENST00000268607 MRS2Q9HD23 443 aa21.49■■□□□ 1.03
MAP1LC3B-201ENST00000268607 MAGI2Q86UL8 1455 aa21.48■■□□□ 1.03
MAP1LC3B-201ENST00000268607 ZBED9Q6R2W3 1325 aa21.48■■□□□ 1.03
MAP1LC3B-201ENST00000268607 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
MAP1LC3B-201ENST00000268607 UGGT1Q9NYU2 1555 aa21.48■■□□□ 1.03
MAP1LC3B-201ENST00000268607 DIP2CQ9Y2E4 1556 aa21.47■■□□□ 1.03
MAP1LC3B-201ENST00000268607 MROH1Q8NDA8 1641 aa21.47■■□□□ 1.03
MAP1LC3B-201ENST00000268607 E9PCH4 1651 aa21.46■■□□□ 1.03
MAP1LC3B-201ENST00000268607 NUTM2DQ5VT03 806 aaPredicted RBP21.45■■□□□ 1.02
MAP1LC3B-201ENST00000268607 ARID4BQ4LE39 1312 aaPredicted RBP21.44■■□□□ 1.02
MAP1LC3B-201ENST00000268607 ST20-MTHFSA0A0A6YYL1 179 aa21.43■■□□□ 1.02
MAP1LC3B-201ENST00000268607 NBPF1Q3BBV0 1214 aa21.43■■□□□ 1.02
MAP1LC3B-201ENST00000268607 ATP10AO60312 1499 aa21.43■■□□□ 1.02
MAP1LC3B-201ENST00000268607 FBXO31Q5XUX0 539 aaPredicted RBP21.42■■□□□ 1.02
MAP1LC3B-201ENST00000268607 CEP152O94986 1710 aa21.42■■□□□ 1.02
MAP1LC3B-201ENST00000268607 IPO9Q96P70 1041 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms