RNA–Protein interactions for RNA: ENST00000264723.8

CSPG5-201, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CSPG5, Length 4,080 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-201ENST00000264723 ZBTB7CA1YPR0 619 aa25.81■■□□□ 1.72
CSPG5-201ENST00000264723 PTPN23Q9H3S7 1636 aa25.81■■□□□ 1.72
CSPG5-201ENST00000264723 DAPK1P53355 1430 aa25.81■■□□□ 1.72
CSPG5-201ENST00000264723 CRBNQ96SW2 442 aa25.8■■□□□ 1.72
CSPG5-201ENST00000264723 SOX12O15370 315 aa25.8■■□□□ 1.72
CSPG5-201ENST00000264723 EIF5BO60841 1220 aaKnown RBP25.79■■□□□ 1.72
CSPG5-201ENST00000264723 SKAP1Q86WV1 359 aa25.79■■□□□ 1.72
CSPG5-201ENST00000264723 PLB1Q6P1J6 1458 aa25.79■■□□□ 1.72
CSPG5-201ENST00000264723 PDE4AP27815 886 aa25.78■■□□□ 1.72
CSPG5-201ENST00000264723 TROQ12816 1431 aaPredicted RBP25.77■■□□□ 1.72
CSPG5-201ENST00000264723 OSCARQ8IYS5 282 aa25.76■■□□□ 1.71
CSPG5-201ENST00000264723 SUPT6HQ7KZ85 1726 aaKnown RBP25.76■■□□□ 1.71
CSPG5-201ENST00000264723 KIAA0586Q9BVV6 1533 aa25.76■■□□□ 1.71
CSPG5-201ENST00000264723 TCERG1O14776 1098 aaKnown RBP25.75■■□□□ 1.71
CSPG5-201ENST00000264723 MIA2Q96PC5 1412 aa25.75■■□□□ 1.71
CSPG5-201ENST00000264723 ABCC5O15440 1437 aa25.74■■□□□ 1.71
CSPG5-201ENST00000264723 DDRGK1Q96HY6 314 aa25.72■■□□□ 1.71
CSPG5-201ENST00000264723 UPF2Q9HAU5 1272 aaKnown RBP25.72■■□□□ 1.71
CSPG5-201ENST00000264723 IQGAP2Q13576 1575 aa25.71■■□□□ 1.71
CSPG5-201ENST00000264723 RRP7AQ9Y3A4 280 aaKnown RBP25.69■■□□□ 1.7
CSPG5-201ENST00000264723 TRHP20396 242 aaPredicted RBP25.68■■□□□ 1.7
CSPG5-201ENST00000264723 MAPK8IP3Q9UPT6 1336 aa25.68■■□□□ 1.7
CSPG5-201ENST00000264723 NCOA1Q15788 1441 aa25.68■■□□□ 1.7
CSPG5-201ENST00000264723 KIAA1107Q9UPP5 1409 aa25.68■■□□□ 1.7
CSPG5-201ENST00000264723 ADAMTS8Q9UP79 889 aa25.67■■□□□ 1.7
CSPG5-201ENST00000264723 GOLGA2Q08379 1002 aa25.67■■□□□ 1.7
CSPG5-201ENST00000264723 SYNJ2O15056 1496 aa25.66■■□□□ 1.7
CSPG5-201ENST00000264723 CLUAP1Q96AJ1 413 aa25.66■■□□□ 1.7
CSPG5-201ENST00000264723 SPRYD3Q8NCJ5 442 aa25.65■■□□□ 1.7
CSPG5-201ENST00000264723 APAF1O14727 1248 aa25.64■■□□□ 1.7
CSPG5-201ENST00000264723 U2AF1L5P0DN76 240 aaPredicted RBP25.64■■□□□ 1.7
CSPG5-201ENST00000264723 U2AF1Q01081 240 aaKnown RBP eCLIP25.64■■□□□ 1.7
CSPG5-201ENST00000264723 PDE3BQ13370 1112 aa25.64■■□□□ 1.7
CSPG5-201ENST00000264723 C9orf84Q5VXU9 1444 aa25.64■■□□□ 1.7
CSPG5-201ENST00000264723 BCL2L13Q9BXK5 485 aa25.63■■□□□ 1.69
CSPG5-201ENST00000264723 CUL7Q14999 1698 aa25.63■■□□□ 1.69
CSPG5-201ENST00000264723 HECW1Q76N89 1606 aa25.62■■□□□ 1.69
CSPG5-201ENST00000264723 FTSJ3Q8IY81 847 aaKnown RBP25.62■■□□□ 1.69
CSPG5-201ENST00000264723 THOC2Q8NI27 1593 aaKnown RBP25.61■■□□□ 1.69
CSPG5-201ENST00000264723 GRIN2AQ12879 1464 aa25.61■■□□□ 1.69
CSPG5-201ENST00000264723 NUTM2FA1L443 756 aa25.6■■□□□ 1.69
CSPG5-201ENST00000264723 ARHGAP5Q13017 1502 aa25.6■■□□□ 1.69
CSPG5-201ENST00000264723 ARHGEF11O15085 1522 aa25.59■■□□□ 1.69
CSPG5-201ENST00000264723 RPRD2Q5VT52 1461 aaKnown RBP25.57■■□□□ 1.68
CSPG5-201ENST00000264723 HSP90AA1P07900 732 aaKnown RBP25.57■■□□□ 1.68
CSPG5-201ENST00000264723 LMOD2Q6P5Q4 547 aa25.57■■□□□ 1.68
CSPG5-201ENST00000264723 TMEM132EQ6IEE7 984 aa25.56■■□□□ 1.68
CSPG5-201ENST00000264723 CFAP70Q5T0N1 1121 aa25.55■■□□□ 1.68
CSPG5-201ENST00000264723 SLKQ9H2G2 1235 aaPredicted RBP25.55■■□□□ 1.68
CSPG5-201ENST00000264723 ROCK1Q13464 1354 aa25.54■■□□□ 1.68
CSPG5-201ENST00000264723 SMG6Q86US8 1419 aaKnown RBP25.54■■□□□ 1.68
CSPG5-201ENST00000264723 BRD4O60885 1362 aaPredicted RBP25.53■■□□□ 1.68
CSPG5-201ENST00000264723 UGGT2Q9NYU1 1516 aa25.52■■□□□ 1.68
CSPG5-201ENST00000264723 CFAP43Q8NDM7 1665 aa25.5■■□□□ 1.67
CSPG5-201ENST00000264723 COG6Q9Y2V7 657 aa25.5■■□□□ 1.67
CSPG5-201ENST00000264723 EIF3AQ14152 1382 aaKnown RBP25.49■■□□□ 1.67
CSPG5-201ENST00000264723 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.49■■□□□ 1.67
CSPG5-201ENST00000264723 C20orf194Q5TEA3 1177 aa25.48■■□□□ 1.67
CSPG5-201ENST00000264723 SCAPERQ9BY12 1400 aa25.47■■□□□ 1.67
CSPG5-201ENST00000264723 MINK1Q8N4C8 1332 aaPredicted RBP25.47■■□□□ 1.67
CSPG5-201ENST00000264723 CAMSAP2Q08AD1 1489 aa25.47■■□□□ 1.67
CSPG5-201ENST00000264723 FAM69CQ0P6D2 419 aa25.46■■□□□ 1.67
CSPG5-201ENST00000264723 BECN1Q14457 450 aa25.46■■□□□ 1.67
CSPG5-201ENST00000264723 HDGFL2Q7Z4V5 671 aaPredicted RBP25.46■■□□□ 1.67
CSPG5-201ENST00000264723 RAPGEF3O95398 923 aa25.44■■□□□ 1.66
CSPG5-201ENST00000264723 MAGI1Q96QZ7 1491 aaPredicted RBP25.43■■□□□ 1.66
CSPG5-201ENST00000264723 MAGI3Q5TCQ9 1506 aa25.43■■□□□ 1.66
CSPG5-201ENST00000264723 PPP2R1AP30153 589 aa25.42■■□□□ 1.66
CSPG5-201ENST00000264723 MYH16Q9H6N6 1097 aa25.41■■□□□ 1.66
CSPG5-201ENST00000264723 VGFO15240 615 aaPredicted RBP25.4■■□□□ 1.66
CSPG5-201ENST00000264723 BCAR3O75815 825 aa25.39■■□□□ 1.66
CSPG5-201ENST00000264723 CENPJQ9HC77 1338 aaPredicted RBP25.39■■□□□ 1.65
CSPG5-201ENST00000264723 PANK1Q8TE04 598 aa25.38■■□□□ 1.65
CSPG5-201ENST00000264723 ZBTB4Q9P1Z0 1013 aaPredicted RBP25.37■■□□□ 1.65
CSPG5-201ENST00000264723 CENPQQ7L2Z9 268 aaPredicted RBP25.37■■□□□ 1.65
CSPG5-201ENST00000264723 BACH2Q9BYV9 841 aa25.36■■□□□ 1.65
CSPG5-201ENST00000264723 HDGFP51858 240 aaKnown RBP25.35■■□□□ 1.65
CSPG5-201ENST00000264723 NUP153P49790 1475 aaKnown RBP25.35■■□□□ 1.65
CSPG5-201ENST00000264723 FAM161AQ3B820 660 aa25.34■■□□□ 1.65
CSPG5-201ENST00000264723 TERF2IPQ9NYB0 399 aa25.34■■□□□ 1.65
CSPG5-201ENST00000264723 GPATCH8Q9UKJ3 1502 aaKnown RBP25.34■■□□□ 1.65
CSPG5-201ENST00000264723 CTTNBP2Q8WZ74 1663 aa25.33■■□□□ 1.65
CSPG5-201ENST00000264723 KDM6BO15054 1643 aa25.33■■□□□ 1.65
CSPG5-201ENST00000264723 GZF1Q9H116 711 aaPredicted RBP25.33■■□□□ 1.65
CSPG5-201ENST00000264723 MS4A1P11836 297 aa25.32■■□□□ 1.64
CSPG5-201ENST00000264723 DHX29Q7Z478 1369 aaKnown RBP25.31■■□□□ 1.64
CSPG5-201ENST00000264723 A0A0G2JS52 829 aa25.3■■□□□ 1.64
CSPG5-201ENST00000264723 CABP2Q9NPB3 220 aa25.3■■□□□ 1.64
CSPG5-201ENST00000264723 ITPRIPQ8IWB1 547 aa25.3■■□□□ 1.64
CSPG5-201ENST00000264723 SLC12A5Q9H2X9 1139 aa25.28■■□□□ 1.64
CSPG5-201ENST00000264723 ELL2O00472 640 aaPredicted RBP25.27■■□□□ 1.64
CSPG5-201ENST00000264723 TCOF1Q13428 1488 aaKnown RBP25.27■■□□□ 1.64
CSPG5-201ENST00000264723 EVC2Q86UK5 1308 aa25.27■■□□□ 1.64
CSPG5-201ENST00000264723 E9PSI1 815 aa25.27■■□□□ 1.64
CSPG5-201ENST00000264723 SMC4Q9NTJ3 1288 aa25.27■■□□□ 1.64
CSPG5-201ENST00000264723 IL27Q8NEV9 243 aa25.26■■□□□ 1.63
CSPG5-201ENST00000264723 MFAP1P55081 439 aaKnown RBP25.26■■□□□ 1.63
CSPG5-201ENST00000264723 GGNBP2Q9H3C7 697 aa25.26■■□□□ 1.63
CSPG5-201ENST00000264723 DISP3Q9P2K9 1392 aa25.26■■□□□ 1.63
CSPG5-201ENST00000264723 ATP10BO94823 1461 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms