RNA–Protein interactions for RNA: ENST00000263309.7

CLNS1A-201, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3 BASIC

Gene CLNS1A, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-201ENST00000263309 PLPPR3Q6T4P5 718 aa18.74■□□□□ 0.59
CLNS1A-201ENST00000263309 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
CLNS1A-201ENST00000263309 PLXNC1O60486 1568 aa18.72■□□□□ 0.59
CLNS1A-201ENST00000263309 ANKRD50Q9ULJ7 1429 aa18.71■□□□□ 0.59
CLNS1A-201ENST00000263309 ADGRL2O95490 1459 aa18.71■□□□□ 0.59
CLNS1A-201ENST00000263309 RIMS1Q86UR5 1692 aaKnown RBP18.69■□□□□ 0.58
CLNS1A-201ENST00000263309 HSPA2P54652 639 aa18.69■□□□□ 0.58
CLNS1A-201ENST00000263309 CROCC2H7BZ55 1655 aa18.68■□□□□ 0.58
CLNS1A-201ENST00000263309 SIGLEC1Q9BZZ2 1709 aa18.67■□□□□ 0.58
CLNS1A-201ENST00000263309 TRIM52Q96A61 297 aa18.67■□□□□ 0.58
CLNS1A-201ENST00000263309 SENP3Q9H4L4 574 aaPredicted RBP18.66■□□□□ 0.58
CLNS1A-201ENST00000263309 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
CLNS1A-201ENST00000263309 EIF2AK4Q9P2K8 1649 aaKnown RBP18.63■□□□□ 0.57
CLNS1A-201ENST00000263309 ZMYM3Q14202 1370 aa18.63■□□□□ 0.57
CLNS1A-201ENST00000263309 FAM135AQ9P2D6 1515 aa18.63■□□□□ 0.57
CLNS1A-201ENST00000263309 PTPRKQ15262 1439 aa18.61■□□□□ 0.57
CLNS1A-201ENST00000263309 NUP155O75694 1391 aa18.59■□□□□ 0.57
CLNS1A-201ENST00000263309 CEBPAP49715 358 aaPredicted RBP18.58■□□□□ 0.56
CLNS1A-201ENST00000263309 CERKQ8TCT0 537 aa18.58■□□□□ 0.56
CLNS1A-201ENST00000263309 HFM1A2PYH4 1435 aa18.57■□□□□ 0.56
CLNS1A-201ENST00000263309 KDM5DQ9BY66 1539 aa18.57■□□□□ 0.56
CLNS1A-201ENST00000263309 FER1L4A9Z1Z3 1794 aa18.57■□□□□ 0.56
CLNS1A-201ENST00000263309 STAG3Q9UJ98 1225 aa18.55■□□□□ 0.56
CLNS1A-201ENST00000263309 SETD5Q9C0A6 1442 aa18.55■□□□□ 0.56
CLNS1A-201ENST00000263309 HRCP23327 699 aa18.54■□□□□ 0.56
CLNS1A-201ENST00000263309 NAIPQ13075 1403 aa18.54■□□□□ 0.56
CLNS1A-201ENST00000263309 SLC4A1APQ9BWU0 796 aaKnown RBP18.53■□□□□ 0.56
CLNS1A-201ENST00000263309 NPATQ14207 1427 aa18.52■□□□□ 0.56
CLNS1A-201ENST00000263309 RNF17Q9BXT8 1623 aaKnown RBP18.51■□□□□ 0.55
CLNS1A-201ENST00000263309 ZC3H13Q5T200 1668 aaKnown RBP18.5■□□□□ 0.55
CLNS1A-201ENST00000263309 UHRF1BP1Q6BDS2 1440 aa18.49■□□□□ 0.55
CLNS1A-201ENST00000263309 HDGFP51858 240 aaKnown RBP18.49■□□□□ 0.55
CLNS1A-201ENST00000263309 MROH2AA6NES4 1674 aa18.49■□□□□ 0.55
CLNS1A-201ENST00000263309 CLTCQ00610 1675 aaKnown RBP18.49■□□□□ 0.55
CLNS1A-201ENST00000263309 SLC52A1Q9NWF4 448 aa18.48■□□□□ 0.55
CLNS1A-201ENST00000263309 THEMISQ8N1K5 641 aaPredicted RBP18.47■□□□□ 0.55
CLNS1A-201ENST00000263309 PRDM15P57071 1507 aaPredicted RBP18.47■□□□□ 0.55
CLNS1A-201ENST00000263309 TNRQ92752 1358 aa18.46■□□□□ 0.55
CLNS1A-201ENST00000263309 ABCC3O15438 1527 aa18.46■□□□□ 0.55
CLNS1A-201ENST00000263309 ARHGAP31Q2M1Z3 1444 aa18.46■□□□□ 0.55
CLNS1A-201ENST00000263309 PZPP20742 1482 aa18.46■□□□□ 0.54
CLNS1A-201ENST00000263309 PREX1Q8TCU6 1659 aa18.45■□□□□ 0.54
CLNS1A-201ENST00000263309 FBXO31Q5XUX0 539 aaPredicted RBP18.45■□□□□ 0.54
CLNS1A-201ENST00000263309 PHF23Q9BUL5 403 aaPredicted RBP18.45■□□□□ 0.54
CLNS1A-201ENST00000263309 DMRT2Q9Y5R5 561 aa18.45■□□□□ 0.54
CLNS1A-201ENST00000263309 RPRD2Q5VT52 1461 aaKnown RBP18.44■□□□□ 0.54
CLNS1A-201ENST00000263309 GCC2Q8IWJ2 1684 aa18.43■□□□□ 0.54
CLNS1A-201ENST00000263309 LMTK2Q8IWU2 1503 aa18.43■□□□□ 0.54
CLNS1A-201ENST00000263309 DEPDC5O75140 1603 aa18.42■□□□□ 0.54
CLNS1A-201ENST00000263309 PKD2Q13563 968 aa18.42■□□□□ 0.54
CLNS1A-201ENST00000263309 MPHOSPH9Q99550 1183 aa18.42■□□□□ 0.54
CLNS1A-201ENST00000263309 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
CLNS1A-201ENST00000263309 UNC13BO14795 1591 aa18.4■□□□□ 0.54
CLNS1A-201ENST00000263309 CHGAP10645 457 aaKnown RBP18.4■□□□□ 0.54
CLNS1A-201ENST00000263309 EID1Q9Y6B2 187 aa18.4■□□□□ 0.54
CLNS1A-201ENST00000263309 C3P01024 1663 aa18.4■□□□□ 0.54
CLNS1A-201ENST00000263309 STRCQ7RTU9 1775 aa18.4■□□□□ 0.54
CLNS1A-201ENST00000263309 NLRP1Q9C000 1473 aa18.39■□□□□ 0.53
CLNS1A-201ENST00000263309 SETD1BQ9UPS6 1966 aaKnown RBP18.38■□□□□ 0.53
CLNS1A-201ENST00000263309 CAMSAP1Q5T5Y3 1602 aa18.38■□□□□ 0.53
CLNS1A-201ENST00000263309 PTPRTO14522 1441 aa18.36■□□□□ 0.53
CLNS1A-201ENST00000263309 ANKLE2Q86XL3 938 aa18.36■□□□□ 0.53
CLNS1A-201ENST00000263309 IQGAP3Q86VI3 1631 aa18.35■□□□□ 0.53
CLNS1A-201ENST00000263309 MROH1Q8NDA8 1641 aa18.35■□□□□ 0.53
CLNS1A-201ENST00000263309 VWDEQ8N2E2 1590 aa18.35■□□□□ 0.53
CLNS1A-201ENST00000263309 CEP152O94986 1710 aa18.35■□□□□ 0.53
CLNS1A-201ENST00000263309 TET3O43151 1660 aa18.34■□□□□ 0.53
CLNS1A-201ENST00000263309 EFCAB6Q5THR3 1501 aa18.34■□□□□ 0.53
CLNS1A-201ENST00000263309 ERVK-7P63135 1459 aa18.34■□□□□ 0.53
CLNS1A-201ENST00000263309 IDI1Q13907 227 aa18.33■□□□□ 0.52
CLNS1A-201ENST00000263309 ZNF326Q5BKZ1 582 aaKnown RBP18.33■□□□□ 0.52
CLNS1A-201ENST00000263309 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.33■□□□□ 0.52
CLNS1A-201ENST00000263309 BCANQ96GW7 911 aa18.33■□□□□ 0.52
CLNS1A-201ENST00000263309 PCGF6Q9BYE7 350 aa18.33■□□□□ 0.52
CLNS1A-201ENST00000263309 ILDR2Q71H61 639 aa18.32■□□□□ 0.52
CLNS1A-201ENST00000263309 A2ML1A8K2U0 1454 aa18.32■□□□□ 0.52
CLNS1A-201ENST00000263309 PPP1R15AO75807 674 aaPredicted RBP18.31■□□□□ 0.52
CLNS1A-201ENST00000263309 DISP3Q9P2K9 1392 aa18.3■□□□□ 0.52
CLNS1A-201ENST00000263309 SPATA31D1Q6ZQQ2 1576 aa18.3■□□□□ 0.52
CLNS1A-201ENST00000263309 LTBP4Q8N2S1 1624 aa18.29■□□□□ 0.52
CLNS1A-201ENST00000263309 UGGT1Q9NYU2 1555 aa18.28■□□□□ 0.52
CLNS1A-201ENST00000263309 NOS1P29475 1434 aa18.27■□□□□ 0.52
CLNS1A-201ENST00000263309 TXNDC2Q86VQ3 553 aa18.27■□□□□ 0.52
CLNS1A-201ENST00000263309 CCDC144AA2RUR9 1427 aa18.26■□□□□ 0.51
CLNS1A-201ENST00000263309 CEP170BQ9Y4F5 1589 aaPredicted RBP18.25■□□□□ 0.51
CLNS1A-201ENST00000263309 SOCS7O14512 581 aa18.24■□□□□ 0.51
CLNS1A-201ENST00000263309 IQSEC2Q5JU85 1478 aa18.24■□□□□ 0.51
CLNS1A-201ENST00000263309 MYO3AQ8NEV4 1616 aa18.23■□□□□ 0.51
CLNS1A-201ENST00000263309 VGFO15240 615 aaPredicted RBP18.22■□□□□ 0.51
CLNS1A-201ENST00000263309 FOXD1Q16676 465 aa18.22■□□□□ 0.51
CLNS1A-201ENST00000263309 RPGRIP1LQ68CZ1 1315 aa18.22■□□□□ 0.51
CLNS1A-201ENST00000263309 PLA2R1Q13018 1463 aa18.2■□□□□ 0.5
CLNS1A-201ENST00000263309 CFAP65Q6ZU64 1925 aaKnown RBP18.2■□□□□ 0.5
CLNS1A-201ENST00000263309 E9PCH4 1651 aa18.2■□□□□ 0.5
CLNS1A-201ENST00000263309 NCKAP5LQ9HCH0 1330 aa18.2■□□□□ 0.5
CLNS1A-201ENST00000263309 TMEM2Q9UHN6 1383 aa18.18■□□□□ 0.5
CLNS1A-201ENST00000263309 STAC3Q96MF2 364 aa18.18■□□□□ 0.5
CLNS1A-201ENST00000263309 RGL3Q3MIN7 710 aa18.17■□□□□ 0.5
CLNS1A-201ENST00000263309 ZNF142P52746 1687 aaPredicted RBP18.15■□□□□ 0.5
CLNS1A-201ENST00000263309 TRPM2O94759 1503 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms