RNA–Protein interactions for RNA: ENST00000263228.3

UBE2R2-201, Transcript of ubiquitin conjugating enzyme E2 R2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2R2, Length 4,075 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2R2-201ENST00000263228 UACAQ9BZF9 1416 aa21.51■■□□□ 1.03
UBE2R2-201ENST00000263228 CDCA8Q53HL2 280 aa21.51■■□□□ 1.03
UBE2R2-201ENST00000263228 CNTLNQ9NXG0 1405 aa21.5■■□□□ 1.03
UBE2R2-201ENST00000263228 MYH16Q9H6N6 1097 aa21.49■■□□□ 1.03
UBE2R2-201ENST00000263228 FRAT2O75474 233 aaPredicted RBP21.48■■□□□ 1.03
UBE2R2-201ENST00000263228 NBPF1Q3BBV0 1214 aa21.47■■□□□ 1.03
UBE2R2-201ENST00000263228 GRIN2BQ13224 1484 aa21.47■■□□□ 1.03
UBE2R2-201ENST00000263228 MAPK8IP3Q9UPT6 1336 aa21.47■■□□□ 1.03
UBE2R2-201ENST00000263228 ITPRIPQ8IWB1 547 aa21.46■■□□□ 1.03
UBE2R2-201ENST00000263228 ADAMTS8Q9UP79 889 aa21.45■■□□□ 1.03
UBE2R2-201ENST00000263228 NAIPQ13075 1403 aa21.45■■□□□ 1.02
UBE2R2-201ENST00000263228 KIF15Q9NS87 1388 aa21.45■■□□□ 1.02
UBE2R2-201ENST00000263228 ELL2O00472 640 aaPredicted RBP21.45■■□□□ 1.02
UBE2R2-201ENST00000263228 PNISRQ8TF01 805 aaKnown RBP21.45■■□□□ 1.02
UBE2R2-201ENST00000263228 NCOA2Q15596 1464 aa21.44■■□□□ 1.02
UBE2R2-201ENST00000263228 FAM161AQ3B820 660 aa21.44■■□□□ 1.02
UBE2R2-201ENST00000263228 HFM1A2PYH4 1435 aa21.44■■□□□ 1.02
UBE2R2-201ENST00000263228 HSCBQ8IWL3 235 aa21.43■■□□□ 1.02
UBE2R2-201ENST00000263228 DNTTIP2Q5QJE6 756 aaKnown RBP21.42■■□□□ 1.02
UBE2R2-201ENST00000263228 GGT6Q6P531 493 aa21.42■■□□□ 1.02
UBE2R2-201ENST00000263228 PTMAP06454 111 aaKnown RBP21.42■■□□□ 1.02
UBE2R2-201ENST00000263228 GOLGA6L22H0YM25 854 aa21.41■■□□□ 1.02
UBE2R2-201ENST00000263228 PANK1Q8TE04 598 aa21.41■■□□□ 1.02
UBE2R2-201ENST00000263228 PNNQ9H307 717 aaKnown RBP21.41■■□□□ 1.02
UBE2R2-201ENST00000263228 MYOM3Q5VTT5 1437 aa21.41■■□□□ 1.02
UBE2R2-201ENST00000263228 PDE3BQ13370 1112 aa21.4■■□□□ 1.02
UBE2R2-201ENST00000263228 TAOK2Q9UL54 1235 aa21.4■■□□□ 1.02
UBE2R2-201ENST00000263228 SRPK2P78362 688 aaKnown RBP21.4■■□□□ 1.02
UBE2R2-201ENST00000263228 KIF21AQ7Z4S6 1674 aa21.39■■□□□ 1.02
UBE2R2-201ENST00000263228 ANKRD30AQ9BXX3 1397 aa21.39■■□□□ 1.02
UBE2R2-201ENST00000263228 C20orf194Q5TEA3 1177 aa21.39■■□□□ 1.01
UBE2R2-201ENST00000263228 FOXD4L5Q5VV16 416 aaPredicted RBP21.39■■□□□ 1.01
UBE2R2-201ENST00000263228 FOXD4L4Q8WXT5 416 aaPredicted RBP21.39■■□□□ 1.01
UBE2R2-201ENST00000263228 TRAK1Q9UPV9 953 aa21.39■■□□□ 1.01
UBE2R2-201ENST00000263228 IFT140Q96RY7 1462 aa21.38■■□□□ 1.01
UBE2R2-201ENST00000263228 JPH4Q96JJ6 628 aa21.38■■□□□ 1.01
UBE2R2-201ENST00000263228 CENPJQ9HC77 1338 aaPredicted RBP21.37■■□□□ 1.01
UBE2R2-201ENST00000263228 ZNF608Q9ULD9 1512 aaPredicted RBP21.36■■□□□ 1.01
UBE2R2-201ENST00000263228 CENPQQ7L2Z9 268 aaPredicted RBP21.36■■□□□ 1.01
UBE2R2-201ENST00000263228 SMC4Q9NTJ3 1288 aa21.36■■□□□ 1.01
UBE2R2-201ENST00000263228 POGKQ9P215 609 aa21.36■■□□□ 1.01
UBE2R2-201ENST00000263228 NPM1P06748 294 aaKnown RBP eCLIP21.35■■□□□ 1.01
UBE2R2-201ENST00000263228 BACH2Q9BYV9 841 aa21.35■■□□□ 1.01
UBE2R2-201ENST00000263228 USP35Q9P2H5 1018 aa21.35■■□□□ 1.01
UBE2R2-201ENST00000263228 CFAP43Q8NDM7 1665 aa21.34■■□□□ 1.01
UBE2R2-201ENST00000263228 BCAR3O75815 825 aa21.34■■□□□ 1.01
UBE2R2-201ENST00000263228 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.34■■□□□ 1.017e-7■■■■□ 21.2
UBE2R2-201ENST00000263228 GOLGA6L3A6NEY3 463 aa21.33■■□□□ 1.01
UBE2R2-201ENST00000263228 NOL8Q76FK4 1167 aaKnown RBP21.33■■□□□ 1.01
UBE2R2-201ENST00000263228 FOXD4L6Q3SYB3 417 aaPredicted RBP21.33■■□□□ 1.01
UBE2R2-201ENST00000263228 FOXD4L3Q6VB84 417 aaPredicted RBP21.33■■□□□ 1.01
UBE2R2-201ENST00000263228 C14orf37Q86TY3 774 aa21.33■■□□□ 1.01
UBE2R2-201ENST00000263228 PTPN23Q9H3S7 1636 aa21.33■■□□□ 1
UBE2R2-201ENST00000263228 CARMIL2Q6F5E8 1435 aa21.31■■□□□ 1
UBE2R2-201ENST00000263228 L1TD1Q5T7N2 865 aaKnown RBP21.31■■□□□ 1
UBE2R2-201ENST00000263228 SNAPC4Q5SXM2 1469 aa21.31■■□□□ 1
UBE2R2-201ENST00000263228 RWDD1Q9H446 243 aaPredicted RBP21.3■■□□□ 1
UBE2R2-201ENST00000263228 KIF3BO15066 747 aa21.3■■□□□ 1
UBE2R2-201ENST00000263228 ESF1Q9H501 851 aaKnown RBP21.29■■□□□ 1
UBE2R2-201ENST00000263228 CTTNBP2Q8WZ74 1663 aa21.29■■□□□ 1
UBE2R2-201ENST00000263228 MS4A1P11836 297 aa21.28■■□□□ 1
UBE2R2-201ENST00000263228 IQGAP2Q13576 1575 aa21.27■■□□□ 1
UBE2R2-201ENST00000263228 ABCA5Q8WWZ7 1642 aa21.25■□□□□ 0.99
UBE2R2-201ENST00000263228 VSIG10Q8N0Z9 540 aa21.24■□□□□ 0.99
UBE2R2-201ENST00000263228 MLECQ14165 292 aa21.22■□□□□ 0.99
UBE2R2-201ENST00000263228 NUTM2FA1L443 756 aa21.21■□□□□ 0.99
UBE2R2-201ENST00000263228 CDK13Q14004 1512 aaKnown RBP21.21■□□□□ 0.99
UBE2R2-201ENST00000263228 PRKCSHP14314 528 aaPredicted RBP21.21■□□□□ 0.99
UBE2R2-201ENST00000263228 AMER1Q5JTC6 1135 aaPredicted RBP21.21■□□□□ 0.99
UBE2R2-201ENST00000263228 CCDC144AA2RUR9 1427 aa21.21■□□□□ 0.99
UBE2R2-201ENST00000263228 EHBP1L1Q8N3D4 1523 aa21.2■□□□□ 0.99
UBE2R2-201ENST00000263228 MSNP26038 577 aaKnown RBP21.19■□□□□ 0.98
UBE2R2-201ENST00000263228 EPRSP07814 1512 aaKnown RBP21.19■□□□□ 0.98
UBE2R2-201ENST00000263228 KIAA0586Q9BVV6 1533 aa21.19■□□□□ 0.98
UBE2R2-201ENST00000263228 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.19■□□□□ 0.98
UBE2R2-201ENST00000263228 PMFBP1Q8TBY8 1022 aa21.18■□□□□ 0.98
UBE2R2-201ENST00000263228 LNPKQ9C0E8 428 aa21.17■□□□□ 0.98
UBE2R2-201ENST00000263228 ANKRD45Q5TZF3 282 aa21.16■□□□□ 0.98
UBE2R2-201ENST00000263228 HECW1Q76N89 1606 aa21.15■□□□□ 0.98
UBE2R2-201ENST00000263228 SUPT6HQ7KZ85 1726 aaKnown RBP21.15■□□□□ 0.98
UBE2R2-201ENST00000263228 TARBP1Q13395 1621 aaKnown RBP21.15■□□□□ 0.98
UBE2R2-201ENST00000263228 GRIN2AQ12879 1464 aa21.14■□□□□ 0.97
UBE2R2-201ENST00000263228 E9PSI1 815 aa21.14■□□□□ 0.97
UBE2R2-201ENST00000263228 SMG6Q86US8 1419 aaKnown RBP21.13■□□□□ 0.97
UBE2R2-201ENST00000263228 TMEM132EQ6IEE7 984 aa21.13■□□□□ 0.97
UBE2R2-201ENST00000263228 PPP2R1AP30153 589 aa21.12■□□□□ 0.97
UBE2R2-201ENST00000263228 SLC4A10Q6U841 1118 aa21.11■□□□□ 0.97
UBE2R2-201ENST00000263228 HSP90AA2PQ14568 343 aaPredicted RBP21.11■□□□□ 0.97
UBE2R2-201ENST00000263228 GBP4Q96PP9 640 aa21.11■□□□□ 0.97
UBE2R2-201ENST00000263228 ADAMTS12P58397 1594 aa21.1■□□□□ 0.97
UBE2R2-201ENST00000263228 KDM6BO15054 1643 aa21.1■□□□□ 0.97
UBE2R2-201ENST00000263228 MAGI3Q5TCQ9 1506 aa21.1■□□□□ 0.97
UBE2R2-201ENST00000263228 NCOA1Q15788 1441 aa21.1■□□□□ 0.97
UBE2R2-201ENST00000263228 BRD4O60885 1362 aaPredicted RBP21.1■□□□□ 0.97
UBE2R2-201ENST00000263228 CASC1Q6TDU7 716 aa21.09■□□□□ 0.97
UBE2R2-201ENST00000263228 ANKRD50Q9ULJ7 1429 aa21.09■□□□□ 0.97
UBE2R2-201ENST00000263228 DDX49Q9Y6V7 483 aaKnown RBP21.09■□□□□ 0.97
UBE2R2-201ENST00000263228 CFAP70Q5T0N1 1121 aa21.08■□□□□ 0.97
UBE2R2-201ENST00000263228 CGNL1Q0VF96 1302 aa21.08■□□□□ 0.96
UBE2R2-201ENST00000263228 PRG4Q92954 1404 aaPredicted RBP21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms