RNA–Protein interactions for RNA: ENST00000263073.10

SMG6-201, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG6, Length 5,960 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-201ENST00000263073 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
SMG6-201ENST00000263073 RILPL2Q969X0 211 aa15.01□□□□□ -0.01
SMG6-201ENST00000263073 DDX11L8A8MPP1 907 aa15.01□□□□□ -0.01
SMG6-201ENST00000263073 NUP155O75694 1391 aa15□□□□□ -0.01
SMG6-201ENST00000263073 CUX2O14529 1486 aa15□□□□□ -0.01
SMG6-201ENST00000263073 TPM4P67936 248 aa14.99□□□□□ -0.01
SMG6-201ENST00000263073 USP35Q9P2H5 1018 aa14.99□□□□□ -0.01
SMG6-201ENST00000263073 A0A0U1RQG5 324 aaPredicted RBP14.99□□□□□ -0.01
SMG6-201ENST00000263073 ZNF771Q7L3S4 317 aaPredicted RBP14.99□□□□□ -0.01
SMG6-201ENST00000263073 GOLGA6L1Q8N7Z2 621 aa14.99□□□□□ -0.01
SMG6-201ENST00000263073 CCDC88BA6NC98 1476 aa14.99□□□□□ -0.01
SMG6-201ENST00000263073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.98□□□□□ -0.01
SMG6-201ENST00000263073 ST18O60284 1047 aa14.98□□□□□ -0.01
SMG6-201ENST00000263073 CENPQQ7L2Z9 268 aaPredicted RBP14.98□□□□□ -0.01
SMG6-201ENST00000263073 KANK1Q14678 1352 aa14.98□□□□□ -0.01
SMG6-201ENST00000263073 NLRP13Q86W25 1043 aa14.98□□□□□ -0.01
SMG6-201ENST00000263073 FANCIQ9NVI1 1328 aa14.98□□□□□ -0.01
SMG6-201ENST00000263073 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
SMG6-201ENST00000263073 HTATSF1O43719 755 aaKnown RBP14.97□□□□□ -0.01
SMG6-201ENST00000263073 GORABQ5T7V8 394 aa14.96□□□□□ -0.01
SMG6-201ENST00000263073 PANK3Q9H999 370 aa14.96□□□□□ -0.01
SMG6-201ENST00000263073 IL27Q8NEV9 243 aa14.96□□□□□ -0.01
SMG6-201ENST00000263073 FBXW7Q969H0 707 aa14.96□□□□□ -0.01
SMG6-201ENST00000263073 STK31Q9BXU1 1019 aa14.96□□□□□ -0.01
SMG6-201ENST00000263073 ST20-MTHFSA0A0A6YYL1 179 aa14.95□□□□□ -0.02
SMG6-201ENST00000263073 PES1O00541 588 aaKnown RBP14.95□□□□□ -0.02
SMG6-201ENST00000263073 RASSF8Q8NHQ8 419 aa14.95□□□□□ -0.02
SMG6-201ENST00000263073 PATL2C9JE40 543 aaKnown RBP14.95□□□□□ -0.02
SMG6-201ENST00000263073 LTV1Q96GA3 475 aaPredicted RBP14.95□□□□□ -0.02
SMG6-201ENST00000263073 BRPF3Q9ULD4 1205 aa14.95□□□□□ -0.02
SMG6-201ENST00000263073 KIF16BQ96L93 1317 aa14.94□□□□□ -0.02
SMG6-201ENST00000263073 PRKRIP1Q9H875 184 aaPredicted RBP14.94□□□□□ -0.02
SMG6-201ENST00000263073 DHX57Q6P158 1386 aaKnown RBP14.93□□□□□ -0.02
SMG6-201ENST00000263073 TOMM22Q9NS69 142 aa14.93□□□□□ -0.02
SMG6-201ENST00000263073 PHF14O94880 888 aa14.93□□□□□ -0.02
SMG6-201ENST00000263073 WIZO95785 1651 aa14.93□□□□□ -0.02
SMG6-201ENST00000263073 MYBBP1AQ9BQG0 1328 aaKnown RBP14.93□□□□□ -0.02
SMG6-201ENST00000263073 SF3A1Q15459 793 aaKnown RBP14.92□□□□□ -0.02
SMG6-201ENST00000263073 HNRNPMP52272 730 aaKnown RBP eCLIP14.92□□□□□ -0.029e-7■■■■■ 27.4
SMG6-201ENST00000263073 NFKBIBQ15653 356 aa14.91□□□□□ -0.02
SMG6-201ENST00000263073 TOP2AP11388 1531 aaKnown RBP14.91□□□□□ -0.02
SMG6-201ENST00000263073 HMMRO75330 724 aa14.91□□□□□ -0.02
SMG6-201ENST00000263073 CSPP1Q1MSJ5 1256 aa14.91□□□□□ -0.02
SMG6-201ENST00000263073 CSB-PGBD3P0DP91 1061 aa14.91□□□□□ -0.02
SMG6-201ENST00000263073 PDE3BQ13370 1112 aa14.91□□□□□ -0.02
SMG6-201ENST00000263073 H3BQV1 296 aa14.91□□□□□ -0.02
SMG6-201ENST00000263073 IFFO2Q5TF58 517 aa14.91□□□□□ -0.02
SMG6-201ENST00000263073 GPATCH3Q96I76 525 aa14.91□□□□□ -0.02
SMG6-201ENST00000263073 TRAK1Q9UPV9 953 aa14.9□□□□□ -0.02
SMG6-201ENST00000263073 KIF15Q9NS87 1388 aa14.9□□□□□ -0.02
SMG6-201ENST00000263073 ZBED9Q6R2W3 1325 aa14.9□□□□□ -0.02
SMG6-201ENST00000263073 FOSBP53539 338 aa14.89□□□□□ -0.03
SMG6-201ENST00000263073 MCTP1Q6DN14 999 aa14.89□□□□□ -0.03
SMG6-201ENST00000263073 NECTIN2Q92692 538 aa14.89□□□□□ -0.03
SMG6-201ENST00000263073 SPAG9O60271 1321 aaKnown RBP14.89□□□□□ -0.03
SMG6-201ENST00000263073 TAF7LQ5H9L4 462 aa14.89□□□□□ -0.03
SMG6-201ENST00000263073 SMARCA4P51532 1647 aa14.88□□□□□ -0.03
SMG6-201ENST00000263073 APAF1O14727 1248 aa14.88□□□□□ -0.03
SMG6-201ENST00000263073 GOLGA6L19H0YKK7 550 aa14.88□□□□□ -0.03
SMG6-201ENST00000263073 FMN1Q68DA7 1419 aa14.87□□□□□ -0.03
SMG6-201ENST00000263073 R3HCC1Q9Y3T6 440 aaKnown RBP14.87□□□□□ -0.03
SMG6-201ENST00000263073 TPM3P06753 285 aa14.87□□□□□ -0.03
SMG6-201ENST00000263073 BECN2A8MW95 431 aa14.86□□□□□ -0.03
SMG6-201ENST00000263073 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
SMG6-201ENST00000263073 SKOR2Q2VWA4 1001 aaPredicted RBP14.85□□□□□ -0.03
SMG6-201ENST00000263073 PDS5BQ9NTI5 1447 aa14.85□□□□□ -0.03
SMG6-201ENST00000263073 FAM184AQ8NB25 1140 aa14.85□□□□□ -0.03
SMG6-201ENST00000263073 ZKSCAN2Q63HK3 967 aa14.84□□□□□ -0.03
SMG6-201ENST00000263073 RBM10P98175 930 aaKnown RBP14.84□□□□□ -0.03
SMG6-201ENST00000263073 TPD52L1Q16890 204 aaPredicted RBP14.84□□□□□ -0.03
SMG6-201ENST00000263073 WWC1Q8IX03 1113 aa14.83□□□□□ -0.03
SMG6-201ENST00000263073 RNF214Q8ND24 703 aa14.83□□□□□ -0.04
SMG6-201ENST00000263073 NGEFQ8N5V2 710 aa14.83□□□□□ -0.04
SMG6-201ENST00000263073 FHOD3Q2V2M9 1422 aa14.83□□□□□ -0.04
SMG6-201ENST00000263073 PANK1Q8TE04 598 aa14.82□□□□□ -0.04
SMG6-201ENST00000263073 KIF3BO15066 747 aa14.82□□□□□ -0.04
SMG6-201ENST00000263073 VPS53Q5VIR6 699 aa14.81□□□□□ -0.04
SMG6-201ENST00000263073 PRM3Q9NNZ6 103 aa14.81□□□□□ -0.04
SMG6-201ENST00000263073 CHMP5Q9NZZ3 219 aa14.81□□□□□ -0.04
SMG6-201ENST00000263073 LNPKQ9C0E8 428 aa14.81□□□□□ -0.04
SMG6-201ENST00000263073 EIF3AQ14152 1382 aaKnown RBP14.81□□□□□ -0.04
SMG6-201ENST00000263073 E9PSI1 815 aa14.8□□□□□ -0.04
SMG6-201ENST00000263073 FRAT2O75474 233 aaPredicted RBP14.8□□□□□ -0.04
SMG6-201ENST00000263073 ANO2Q9NQ90 1003 aa14.8□□□□□ -0.04
SMG6-201ENST00000263073 ANKRD30AQ9BXX3 1397 aa14.8□□□□□ -0.04
SMG6-201ENST00000263073 AMPHP49418 695 aa14.8□□□□□ -0.04
SMG6-201ENST00000263073 HOMER1Q86YM7 354 aa14.8□□□□□ -0.04
SMG6-201ENST00000263073 FBXO3Q9UK99 471 aa14.8□□□□□ -0.04
SMG6-201ENST00000263073 MPNDQ8N594 471 aa14.79□□□□□ -0.04
SMG6-201ENST00000263073 TERF2IPQ9NYB0 399 aa14.79□□□□□ -0.04
SMG6-201ENST00000263073 VPS37CA5D8V6 355 aaPredicted RBP14.79□□□□□ -0.04
SMG6-201ENST00000263073 ATAD2BQ9ULI0 1458 aa14.78□□□□□ -0.04
SMG6-201ENST00000263073 SETQ01105 290 aaPredicted RBP14.78□□□□□ -0.04
SMG6-201ENST00000263073 KDM4AO75164 1064 aa14.78□□□□□ -0.04
SMG6-201ENST00000263073 EIF2S2P20042 333 aaKnown RBP14.78□□□□□ -0.04
SMG6-201ENST00000263073 BICD2Q8TD16 824 aa14.78□□□□□ -0.04
SMG6-201ENST00000263073 IFT57Q9NWB7 429 aa14.78□□□□□ -0.04
SMG6-201ENST00000263073 USP47Q96K76 1375 aa14.78□□□□□ -0.04
SMG6-201ENST00000263073 C22orf23Q9BZE7 217 aa14.77□□□□□ -0.04
SMG6-201ENST00000263073 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms