RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 COG6Q9Y2V7 657 aa20.52■□□□□ 0.88
SREBF1-201ENST00000261646 CENPJQ9HC77 1338 aaPredicted RBP20.52■□□□□ 0.88
SREBF1-201ENST00000261646 PNISRQ8TF01 805 aaKnown RBP20.52■□□□□ 0.87
SREBF1-201ENST00000261646 MORC1Q86VD1 984 aa20.51■□□□□ 0.87
SREBF1-201ENST00000261646 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
SREBF1-201ENST00000261646 POLA1P09884 1462 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-201ENST00000261646 CASC1Q6TDU7 716 aa20.49■□□□□ 0.87
SREBF1-201ENST00000261646 BCL2L13Q9BXK5 485 aa20.48■□□□□ 0.87
SREBF1-201ENST00000261646 UNC13AQ9UPW8 1703 aa20.48■□□□□ 0.87
SREBF1-201ENST00000261646 CARMIL2Q6F5E8 1435 aa20.47■□□□□ 0.87
SREBF1-201ENST00000261646 ITPRIPQ8IWB1 547 aa20.47■□□□□ 0.87
SREBF1-201ENST00000261646 SKAP1Q86WV1 359 aa20.47■□□□□ 0.87
SREBF1-201ENST00000261646 APAF1O14727 1248 aa20.46■□□□□ 0.87
SREBF1-201ENST00000261646 FYCO1Q9BQS8 1478 aa20.45■□□□□ 0.86
SREBF1-201ENST00000261646 FAM43AQ8N2R8 423 aa20.43■□□□□ 0.86
SREBF1-201ENST00000261646 RRP7AQ9Y3A4 280 aaKnown RBP20.43■□□□□ 0.86
SREBF1-201ENST00000261646 NAIPQ13075 1403 aa20.42■□□□□ 0.86
SREBF1-201ENST00000261646 CGNL1Q0VF96 1302 aa20.42■□□□□ 0.86
SREBF1-201ENST00000261646 HFM1A2PYH4 1435 aa20.42■□□□□ 0.86
SREBF1-201ENST00000261646 DDX11L8A8MPP1 907 aa20.42■□□□□ 0.86
SREBF1-201ENST00000261646 U2AF1L5P0DN76 240 aaPredicted RBP20.42■□□□□ 0.86
SREBF1-201ENST00000261646 U2AF1Q01081 240 aaKnown RBP eCLIP20.42■□□□□ 0.86
SREBF1-201ENST00000261646 TOPBP1Q92547 1522 aa20.42■□□□□ 0.86
SREBF1-201ENST00000261646 GGT6Q6P531 493 aa20.42■□□□□ 0.86
SREBF1-201ENST00000261646 BRD4O60885 1362 aaPredicted RBP20.41■□□□□ 0.86
SREBF1-201ENST00000261646 CALD1Q05682 793 aaKnown RBP20.4■□□□□ 0.86
SREBF1-201ENST00000261646 HMGXB3Q12766 1538 aa20.4■□□□□ 0.86
SREBF1-201ENST00000261646 PTMSP20962 102 aa20.39■□□□□ 0.86
SREBF1-201ENST00000261646 NUTM2DQ5VT03 806 aaPredicted RBP20.39■□□□□ 0.86
SREBF1-201ENST00000261646 CHMP4BQ9H444 224 aaKnown RBP20.39■□□□□ 0.85
SREBF1-201ENST00000261646 SMC4Q9NTJ3 1288 aa20.39■□□□□ 0.85
SREBF1-201ENST00000261646 PCF11O94913 1555 aaKnown RBP20.38■□□□□ 0.85
SREBF1-201ENST00000261646 CHMP5Q9NZZ3 219 aa20.38■□□□□ 0.85
SREBF1-201ENST00000261646 PEG3Q9GZU2 1588 aa20.37■□□□□ 0.85
SREBF1-201ENST00000261646 E9PSI1 815 aa20.37■□□□□ 0.85
SREBF1-201ENST00000261646 APBB1O00213 710 aa20.37■□□□□ 0.85
SREBF1-201ENST00000261646 ADAMTS8Q9UP79 889 aa20.37■□□□□ 0.85
SREBF1-201ENST00000261646 KIF3BO15066 747 aa20.37■□□□□ 0.85
SREBF1-201ENST00000261646 DDX49Q9Y6V7 483 aaKnown RBP20.36■□□□□ 0.85
SREBF1-201ENST00000261646 PLEKHG5O94827 1062 aa20.36■□□□□ 0.85
SREBF1-201ENST00000261646 PKNOX2Q96KN3 472 aa20.36■□□□□ 0.85
SREBF1-201ENST00000261646 IPO8O15397 1037 aaKnown RBP20.35■□□□□ 0.85
SREBF1-201ENST00000261646 ESF1Q9H501 851 aaKnown RBP20.35■□□□□ 0.85
SREBF1-201ENST00000261646 NBPF1Q3BBV0 1214 aa20.35■□□□□ 0.85
SREBF1-201ENST00000261646 STK26Q9P289 416 aa20.34■□□□□ 0.85
SREBF1-201ENST00000261646 EFCAB2Q5VUJ9 269 aa20.33■□□□□ 0.85
SREBF1-201ENST00000261646 MAPKBP1O60336 1514 aa20.33■□□□□ 0.85
SREBF1-201ENST00000261646 PANK1Q8TE04 598 aa20.32■□□□□ 0.84
SREBF1-201ENST00000261646 CHAF1AQ13111 956 aaPredicted RBP20.32■□□□□ 0.84
SREBF1-201ENST00000261646 KIAA2012Q0VF49 1180 aa20.31■□□□□ 0.84
SREBF1-201ENST00000261646 CCDC144AA2RUR9 1427 aa20.31■□□□□ 0.84
SREBF1-201ENST00000261646 PTPRKQ15262 1439 aa20.31■□□□□ 0.84
SREBF1-201ENST00000261646 FAM13BQ9NYF5 915 aa20.31■□□□□ 0.84
SREBF1-201ENST00000261646 PRG4Q92954 1404 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-201ENST00000261646 POGKQ9P215 609 aa20.3■□□□□ 0.84
SREBF1-201ENST00000261646 AMER1Q5JTC6 1135 aaPredicted RBP20.3■□□□□ 0.84
SREBF1-201ENST00000261646 CDK13Q14004 1512 aaKnown RBP20.3■□□□□ 0.84
SREBF1-201ENST00000261646 MRE11P49959 708 aa20.29■□□□□ 0.84
SREBF1-201ENST00000261646 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
SREBF1-201ENST00000261646 TRAK2O60296 914 aa20.29■□□□□ 0.84
SREBF1-201ENST00000261646 ANKRD50Q9ULJ7 1429 aa20.29■□□□□ 0.84
SREBF1-201ENST00000261646 CDK11BP21127 795 aaKnown RBP20.28■□□□□ 0.84
SREBF1-201ENST00000261646 SKOR2Q2VWA4 1001 aaPredicted RBP20.27■□□□□ 0.84
SREBF1-201ENST00000261646 PRDM2Q13029 1718 aa20.27■□□□□ 0.84
SREBF1-201ENST00000261646 C22orf23Q9BZE7 217 aa20.26■□□□□ 0.83
SREBF1-201ENST00000261646 TRAK1Q9UPV9 953 aa20.26■□□□□ 0.83
SREBF1-201ENST00000261646 FOXD4L5Q5VV16 416 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-201ENST00000261646 FOXD4L4Q8WXT5 416 aaPredicted RBP20.26■□□□□ 0.83
SREBF1-201ENST00000261646 SRPK2P78362 688 aaKnown RBP20.25■□□□□ 0.83
SREBF1-201ENST00000261646 PTPRGP23470 1445 aa20.24■□□□□ 0.83
SREBF1-201ENST00000261646 SPAG9O60271 1321 aaKnown RBP20.24■□□□□ 0.83
SREBF1-201ENST00000261646 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
SREBF1-201ENST00000261646 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
SREBF1-201ENST00000261646 EFCAB5A4FU69 1503 aa20.23■□□□□ 0.83
SREBF1-201ENST00000261646 BIVM-ERCC5R4GMW8 1640 aa20.23■□□□□ 0.83
SREBF1-201ENST00000261646 BCAR3O75815 825 aa20.22■□□□□ 0.83
SREBF1-201ENST00000261646 ANKRD45Q5TZF3 282 aa20.2■□□□□ 0.82
SREBF1-201ENST00000261646 UBE2Q2Q8WVN8 375 aa20.2■□□□□ 0.82
SREBF1-201ENST00000261646 CFAP44Q96MT7 982 aa20.2■□□□□ 0.82
SREBF1-201ENST00000261646 ABCA10Q8WWZ4 1543 aa20.2■□□□□ 0.82
SREBF1-201ENST00000261646 SOX12O15370 315 aa20.2■□□□□ 0.82
SREBF1-201ENST00000261646 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.19■□□□□ 0.823e-17■■■■■ 29
SREBF1-201ENST00000261646 MLECQ14165 292 aa20.19■□□□□ 0.82
SREBF1-201ENST00000261646 KANK1Q14678 1352 aa20.19■□□□□ 0.82
SREBF1-201ENST00000261646 NOL8Q76FK4 1167 aaKnown RBP20.18■□□□□ 0.82
SREBF1-201ENST00000261646 MCCP23508 829 aa20.18■□□□□ 0.82
SREBF1-201ENST00000261646 DRC7Q8IY82 874 aa20.18■□□□□ 0.82
SREBF1-201ENST00000261646 RSPH4AQ5TD94 716 aa20.18■□□□□ 0.82
SREBF1-201ENST00000261646 GOLGA6L4A6NEF3 574 aa20.17■□□□□ 0.82
SREBF1-201ENST00000261646 SYAP1Q96A49 352 aaPredicted RBP20.17■□□□□ 0.82
SREBF1-201ENST00000261646 DNMBPQ6XZF7 1577 aa20.16■□□□□ 0.82
SREBF1-201ENST00000261646 ZRSR1Q15695 479 aaKnown RBP20.16■□□□□ 0.82
SREBF1-201ENST00000261646 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
SREBF1-201ENST00000261646 PDZRN3Q9UPQ7 1066 aa20.16■□□□□ 0.82
SREBF1-201ENST00000261646 EPRSP07814 1512 aaKnown RBP20.16■□□□□ 0.82
SREBF1-201ENST00000261646 DAPK1P53355 1430 aa20.15■□□□□ 0.82
SREBF1-201ENST00000261646 NCOA1Q15788 1441 aa20.15■□□□□ 0.82
SREBF1-201ENST00000261646 EHBP1L1Q8N3D4 1523 aa20.15■□□□□ 0.82
SREBF1-201ENST00000261646 FOXD4L6Q3SYB3 417 aaPredicted RBP20.15■□□□□ 0.82
SREBF1-201ENST00000261646 FOXD4L3Q6VB84 417 aaPredicted RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 175.7 ms