RNA–Protein interactions for RNA: ENST00000261438.9

KLF3-201, Transcript of Kruppel like factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KLF3, Length 5,122 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-201ENST00000261438 ZNF771Q7L3S4 317 aaPredicted RBP21.6■■□□□ 1.05
KLF3-201ENST00000261438 MTERF4Q7Z6M4 381 aaKnown RBP21.6■■□□□ 1.05
KLF3-201ENST00000261438 ST18O60284 1047 aa21.6■■□□□ 1.05
KLF3-201ENST00000261438 PANK3Q9H999 370 aa21.6■■□□□ 1.05
KLF3-201ENST00000261438 KIF21BO75037 1637 aa21.59■■□□□ 1.05
KLF3-201ENST00000261438 FGD1P98174 961 aa21.59■■□□□ 1.05
KLF3-201ENST00000261438 FOXD4L5Q5VV16 416 aaPredicted RBP21.58■■□□□ 1.05
KLF3-201ENST00000261438 FOXD4L4Q8WXT5 416 aaPredicted RBP21.58■■□□□ 1.05
KLF3-201ENST00000261438 SMG6Q86US8 1419 aaKnown RBP21.58■■□□□ 1.04
KLF3-201ENST00000261438 FHOD3Q2V2M9 1422 aa21.58■■□□□ 1.04
KLF3-201ENST00000261438 CCDC184Q52MB2 194 aa21.56■■□□□ 1.04
KLF3-201ENST00000261438 NASPP49321 788 aaPredicted RBP21.55■■□□□ 1.04
KLF3-201ENST00000261438 BCL2L13Q9BXK5 485 aa21.55■■□□□ 1.04
KLF3-201ENST00000261438 RRBP1Q9P2E9 1410 aaKnown RBP21.55■■□□□ 1.04
KLF3-201ENST00000261438 OS9Q13438 667 aaPredicted RBP21.54■■□□□ 1.04
KLF3-201ENST00000261438 C22orf23Q9BZE7 217 aa21.54■■□□□ 1.04
KLF3-201ENST00000261438 UACAQ9BZF9 1416 aa21.54■■□□□ 1.04
KLF3-201ENST00000261438 CDCA7LQ96GN5 454 aa21.52■■□□□ 1.04
KLF3-201ENST00000261438 RBM10P98175 930 aaKnown RBP21.52■■□□□ 1.04
KLF3-201ENST00000261438 KIAA1211Q6ZU35 1233 aa21.51■■□□□ 1.03
KLF3-201ENST00000261438 NOL8Q76FK4 1167 aaKnown RBP21.51■■□□□ 1.03
KLF3-201ENST00000261438 ANKRD30AQ9BXX3 1397 aa21.51■■□□□ 1.03
KLF3-201ENST00000261438 APAF1O14727 1248 aa21.5■■□□□ 1.03
KLF3-201ENST00000261438 HAP1P54257 671 aaPredicted RBP21.5■■□□□ 1.03
KLF3-201ENST00000261438 BRD4O60885 1362 aaPredicted RBP21.5■■□□□ 1.03
KLF3-201ENST00000261438 ZKSCAN2Q63HK3 967 aa21.49■■□□□ 1.03
KLF3-201ENST00000261438 ESF1Q9H501 851 aaKnown RBP21.49■■□□□ 1.03
KLF3-201ENST00000261438 RRP7AQ9Y3A4 280 aaKnown RBP21.49■■□□□ 1.03
KLF3-201ENST00000261438 EIF4G1Q04637 1599 aaKnown RBP21.49■■□□□ 1.03
KLF3-201ENST00000261438 WDR97A6NE52 1622 aa21.49■■□□□ 1.03
KLF3-201ENST00000261438 NAP1L2Q9ULW6 460 aaPredicted RBP21.48■■□□□ 1.03
KLF3-201ENST00000261438 ESPNB1AK53 854 aa21.48■■□□□ 1.03
KLF3-201ENST00000261438 ANKRD45Q5TZF3 282 aa21.47■■□□□ 1.03
KLF3-201ENST00000261438 EIF3AQ14152 1382 aaKnown RBP21.46■■□□□ 1.03
KLF3-201ENST00000261438 CCDC173Q0VFZ6 552 aa21.45■■□□□ 1.03
KLF3-201ENST00000261438 POGKQ9P215 609 aa21.45■■□□□ 1.03
KLF3-201ENST00000261438 GRPEL1Q9HAV7 217 aa21.45■■□□□ 1.02
KLF3-201ENST00000261438 ISY1Q9ULR0 285 aaKnown RBP21.45■■□□□ 1.02
KLF3-201ENST00000261438 KIF16BQ96L93 1317 aa21.44■■□□□ 1.02
KLF3-201ENST00000261438 HTATSF1O43719 755 aaKnown RBP21.44■■□□□ 1.02
KLF3-201ENST00000261438 TAOK2Q9UL54 1235 aa21.44■■□□□ 1.02
KLF3-201ENST00000261438 MCTP1Q6DN14 999 aa21.43■■□□□ 1.02
KLF3-201ENST00000261438 NUCB2P80303 420 aa21.43■■□□□ 1.02
KLF3-201ENST00000261438 CCDC39Q9UFE4 941 aa21.43■■□□□ 1.02
KLF3-201ENST00000261438 PNISRQ8TF01 805 aaKnown RBP21.42■■□□□ 1.02
KLF3-201ENST00000261438 FOXD4L6Q3SYB3 417 aaPredicted RBP21.42■■□□□ 1.02
KLF3-201ENST00000261438 FOXD4L3Q6VB84 417 aaPredicted RBP21.42■■□□□ 1.02
KLF3-201ENST00000261438 NGEFQ8N5V2 710 aa21.4■■□□□ 1.02
KLF3-201ENST00000261438 TRIM6-TRIM34B2RNG4 842 aa21.4■■□□□ 1.02
KLF3-201ENST00000261438 PANK1Q8TE04 598 aa21.4■■□□□ 1.02
KLF3-201ENST00000261438 SRPK2P78362 688 aaKnown RBP21.39■■□□□ 1.02
KLF3-201ENST00000261438 AAMPQ13685 434 aa21.39■■□□□ 1.01
KLF3-201ENST00000261438 ZMYND15Q9H091 742 aa21.39■■□□□ 1.01
KLF3-201ENST00000261438 MCM4P33991 863 aa21.38■■□□□ 1.01
KLF3-201ENST00000261438 DDX19BQ9UMR2 479 aa21.38■■□□□ 1.01
KLF3-201ENST00000261438 FGD6Q6ZV73 1430 aa21.38■■□□□ 1.01
KLF3-201ENST00000261438 HMMRO75330 724 aa21.37■■□□□ 1.01
KLF3-201ENST00000261438 DZIP1LQ8IYY4 767 aaKnown RBP21.37■■□□□ 1.01
KLF3-201ENST00000261438 LRRC9Q6ZRR7 1453 aa21.37■■□□□ 1.01
KLF3-201ENST00000261438 NPM1P06748 294 aaKnown RBP eCLIP21.35■■□□□ 1.01
KLF3-201ENST00000261438 TPM4P67936 248 aa21.35■■□□□ 1.01
KLF3-201ENST00000261438 ZNF592Q92610 1267 aa21.35■■□□□ 1.01
KLF3-201ENST00000261438 DIAPH3Q9NSV4 1193 aa21.35■■□□□ 1.01
KLF3-201ENST00000261438 ADAMTS8Q9UP79 889 aa21.34■■□□□ 1.01
KLF3-201ENST00000261438 ATP6V1DQ9Y5K8 247 aa21.34■■□□□ 1.01
KLF3-201ENST00000261438 CAVIN1Q6NZI2 390 aaKnown RBP21.34■■□□□ 1.01
KLF3-201ENST00000261438 GOLGA6L1Q8N7Z2 621 aa21.33■■□□□ 1.01
KLF3-201ENST00000261438 SAFB2Q14151 953 aaKnown RBP eCLIP21.33■■□□□ 1
KLF3-201ENST00000261438 RNF214Q8ND24 703 aa21.32■■□□□ 1
KLF3-201ENST00000261438 HMGN5P82970 282 aaKnown RBP21.31■■□□□ 1
KLF3-201ENST00000261438 UQCRHLA0A096LP55 91 aa21.3■■□□□ 1
KLF3-201ENST00000261438 UQCRHP07919 91 aa21.3■■□□□ 1
KLF3-201ENST00000261438 LNPKQ9C0E8 428 aa21.3■■□□□ 1
KLF3-201ENST00000261438 PDZRN3Q9UPQ7 1066 aa21.3■■□□□ 1
KLF3-201ENST00000261438 C11orf95C9JLR9 678 aaPredicted RBP21.3■■□□□ 1
KLF3-201ENST00000261438 REC8O95072 547 aa21.3■■□□□ 1
KLF3-201ENST00000261438 KANK1Q14678 1352 aa21.29■■□□□ 1
KLF3-201ENST00000261438 PDCL3Q9H2J4 239 aa21.28■■□□□ 1
KLF3-201ENST00000261438 ARAP1Q96P48 1450 aa21.28■■□□□ 1
KLF3-201ENST00000261438 C14orf37Q86TY3 774 aa21.28■■□□□ 1
KLF3-201ENST00000261438 GOLGA6L19H0YKK7 550 aa21.28■■□□□ 1
KLF3-201ENST00000261438 TEX35Q5T0J7 233 aa21.26■□□□□ 0.99
KLF3-201ENST00000261438 ZSCAN30Q86W11 494 aa21.26■□□□□ 0.99
KLF3-201ENST00000261438 SKAP1Q86WV1 359 aa21.26■□□□□ 0.99
KLF3-201ENST00000261438 CCDC144AA2RUR9 1427 aa21.26■□□□□ 0.99
KLF3-201ENST00000261438 PDE3AQ14432 1141 aa21.25■□□□□ 0.99
KLF3-201ENST00000261438 HDGFL2Q7Z4V5 671 aaPredicted RBP21.25■□□□□ 0.99
KLF3-201ENST00000261438 RTF1Q92541 710 aaKnown RBP21.24■□□□□ 0.99
KLF3-201ENST00000261438 CCDC66A2RUB6 948 aa21.24■□□□□ 0.99
KLF3-201ENST00000261438 NBPF8Q3BBV2 869 aa21.24■□□□□ 0.99
KLF3-201ENST00000261438 MYOM3Q5VTT5 1437 aa21.23■□□□□ 0.99
KLF3-201ENST00000261438 BECN2A8MW95 431 aa21.23■□□□□ 0.99
KLF3-201ENST00000261438 SMARCA2P51531 1590 aa21.23■□□□□ 0.99
KLF3-201ENST00000261438 IFT57Q9NWB7 429 aa21.23■□□□□ 0.99
KLF3-201ENST00000261438 MIA2Q96PC5 1412 aa21.22■□□□□ 0.99
KLF3-201ENST00000261438 SLC4A10Q6U841 1118 aa21.22■□□□□ 0.99
KLF3-201ENST00000261438 PRPF40AO75400 957 aaKnown RBP21.22■□□□□ 0.99
KLF3-201ENST00000261438 RILPL2Q969X0 211 aa21.21■□□□□ 0.99
KLF3-201ENST00000261438 MBD3O95983 291 aa21.21■□□□□ 0.99
KLF3-201ENST00000261438 GNL2Q13823 731 aaKnown RBP21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms