RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 BECN1Q14457 450 aa5.08□□□□□ -1.6
RNF38-201ENST00000259605 TOMM22Q9NS69 142 aa5.08□□□□□ -1.6
RNF38-201ENST00000259605 SOGA1O94964 1423 aa5.08□□□□□ -1.6
RNF38-201ENST00000259605 LTV1Q96GA3 475 aaPredicted RBP5.07□□□□□ -1.6
RNF38-201ENST00000259605 KIF3AQ9Y496 699 aa5.07□□□□□ -1.6
RNF38-201ENST00000259605 GOLGA3Q08378 1498 aa5.07□□□□□ -1.6
RNF38-201ENST00000259605 RAD21O60216 631 aa5.07□□□□□ -1.6
RNF38-201ENST00000259605 AKAP17AQ02040 695 aaKnown RBP5.07□□□□□ -1.6
RNF38-201ENST00000259605 DDX58O95786 925 aaKnown RBP5.07□□□□□ -1.6
RNF38-201ENST00000259605 RFX1P22670 979 aa5.07□□□□□ -1.6
RNF38-201ENST00000259605 POTEDQ86YR6 584 aa5.07□□□□□ -1.6
RNF38-201ENST00000259605 ANKRD30AQ9BXX3 1397 aa5.07□□□□□ -1.6
RNF38-201ENST00000259605 HMMRO75330 724 aa5.06□□□□□ -1.6
RNF38-201ENST00000259605 FAM9BQ8IZU0 186 aa5.06□□□□□ -1.6
RNF38-201ENST00000259605 COG3Q96JB2 828 aa5.06□□□□□ -1.6
RNF38-201ENST00000259605 DNAI2Q9GZS0 605 aa5.06□□□□□ -1.6
RNF38-201ENST00000259605 MRS2Q9HD23 443 aa5.06□□□□□ -1.6
RNF38-201ENST00000259605 CARMIL1Q5VZK9 1371 aa5.06□□□□□ -1.6
RNF38-201ENST00000259605 SETD5Q9C0A6 1442 aa5.06□□□□□ -1.6
RNF38-201ENST00000259605 ZCCHC6Q5VYS8 1495 aaKnown RBP5.06□□□□□ -1.6
RNF38-201ENST00000259605 SYNE3Q6ZMZ3 975 aa5.06□□□□□ -1.6
RNF38-201ENST00000259605 SMARCA2P51531 1590 aa5.06□□□□□ -1.6
RNF38-201ENST00000259605 TNNT2P45379 298 aaPredicted RBP5.06□□□□□ -1.6
RNF38-201ENST00000259605 NOP2P46087 812 aaKnown RBP5.05□□□□□ -1.6
RNF38-201ENST00000259605 TTLL12Q14166 644 aaPredicted RBP5.05□□□□□ -1.6
RNF38-201ENST00000259605 NLRP2Q9NX02 1062 aa5.05□□□□□ -1.6
RNF38-201ENST00000259605 CUX2O14529 1486 aa5.05□□□□□ -1.6
RNF38-201ENST00000259605 DHX16O60231 1041 aaKnown RBP5.05□□□□□ -1.6
RNF38-201ENST00000259605 TRIM21P19474 475 aaKnown RBP5.05□□□□□ -1.6
RNF38-201ENST00000259605 SSFA2P28290 1259 aa5.05□□□□□ -1.6
RNF38-201ENST00000259605 AMER1Q5JTC6 1135 aaPredicted RBP5.05□□□□□ -1.6
RNF38-201ENST00000259605 CPLX2Q6PUV4 134 aaKnown RBP5.05□□□□□ -1.6
RNF38-201ENST00000259605 CCDC47Q96A33 483 aaKnown RBP5.05□□□□□ -1.6
RNF38-201ENST00000259605 ARHGEF6Q15052 776 aa5.04□□□□□ -1.6
RNF38-201ENST00000259605 BCL11BQ9C0K0 894 aaPredicted RBP5.04□□□□□ -1.6
RNF38-201ENST00000259605 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.04□□□□□ -1.62e-7■■■■■ 106.2
RNF38-201ENST00000259605 NF2P35240 595 aa5.04□□□□□ -1.6
RNF38-201ENST00000259605 TMEM132AQ24JP5 1023 aa5.04□□□□□ -1.6
RNF38-201ENST00000259605 TXNDC2Q86VQ3 553 aa5.04□□□□□ -1.6
RNF38-201ENST00000259605 DCAF11Q8TEB1 546 aa5.03□□□□□ -1.6
RNF38-201ENST00000259605 NUTM2FA1L443 756 aa5.03□□□□□ -1.6
RNF38-201ENST00000259605 HNRNPUQ00839 825 aaKnown RBP eCLIP5.03□□□□□ -1.6
RNF38-201ENST00000259605 NOC3LQ8WTT2 800 aaKnown RBP5.03□□□□□ -1.6
RNF38-201ENST00000259605 PRDM11Q9NQV5 511 aa5.03□□□□□ -1.6
RNF38-201ENST00000259605 IKQ13123 557 aaPredicted RBP5.03□□□□□ -1.6
RNF38-201ENST00000259605 CRBNQ96SW2 442 aa5.03□□□□□ -1.6
RNF38-201ENST00000259605 STRN4Q9NRL3 753 aa5.03□□□□□ -1.6
RNF38-201ENST00000259605 CLEC11AQ9Y240 323 aa5.03□□□□□ -1.6
RNF38-201ENST00000259605 CADPSQ9ULU8 1353 aa5.03□□□□□ -1.6
RNF38-201ENST00000259605 KIF6Q6ZMV9 814 aa5.02□□□□□ -1.61
RNF38-201ENST00000259605 CCDC136Q96JN2 1154 aa5.02□□□□□ -1.61
RNF38-201ENST00000259605 GNL3LQ9NVN8 582 aaKnown RBP5.02□□□□□ -1.61
RNF38-201ENST00000259605 HSP90AB1P08238 724 aaKnown RBP5.02□□□□□ -1.61
RNF38-201ENST00000259605 PPP6R1Q9UPN7 881 aa5.02□□□□□ -1.61
RNF38-201ENST00000259605 MPHOSPH10O00566 681 aaKnown RBP5.02□□□□□ -1.61
RNF38-201ENST00000259605 PPM1FP49593 454 aaPredicted RBP5.02□□□□□ -1.61
RNF38-201ENST00000259605 TDRD9Q8NDG6 1382 aaKnown RBP5.02□□□□□ -1.61
RNF38-201ENST00000259605 FMN1Q68DA7 1419 aa5.02□□□□□ -1.61
RNF38-201ENST00000259605 TPM4P67936 248 aa5.02□□□□□ -1.61
RNF38-201ENST00000259605 PODXL2Q9NZ53 605 aa5.02□□□□□ -1.61
RNF38-201ENST00000259605 USP35Q9P2H5 1018 aa5.02□□□□□ -1.61
RNF38-201ENST00000259605 LRPPRCP42704 1394 aaKnown RBP5.01□□□□□ -1.61
RNF38-201ENST00000259605 TPM2P07951 284 aa5.01□□□□□ -1.61
RNF38-201ENST00000259605 SLC3A2P08195 630 aaKnown RBP5.01□□□□□ -1.61
RNF38-201ENST00000259605 TATP17735 454 aaPredicted RBP5.01□□□□□ -1.61
RNF38-201ENST00000259605 ESCO1Q5FWF5 840 aa5.01□□□□□ -1.61
RNF38-201ENST00000259605 TOM1L2Q6ZVM7 507 aa5.01□□□□□ -1.61
RNF38-201ENST00000259605 MPHOSPH6Q99547 160 aaKnown RBP5.01□□□□□ -1.61
RNF38-201ENST00000259605 U2AF1L5P0DN76 240 aaPredicted RBP5.01□□□□□ -1.61
RNF38-201ENST00000259605 U2AF1Q01081 240 aaKnown RBP eCLIP5.01□□□□□ -1.61
RNF38-201ENST00000259605 SMG6Q86US8 1419 aaKnown RBP5.01□□□□□ -1.61
RNF38-201ENST00000259605 EVC2Q86UK5 1308 aa5.01□□□□□ -1.61
RNF38-201ENST00000259605 SAMD1Q6SPF0 538 aaPredicted RBP5.01□□□□□ -1.61
RNF38-201ENST00000259605 AIDAQ96BJ3 306 aa5.01□□□□□ -1.61
RNF38-201ENST00000259605 STAC3Q96MF2 364 aa5.01□□□□□ -1.61
RNF38-201ENST00000259605 RBM27Q9P2N5 1060 aaKnown RBP5.01□□□□□ -1.61
RNF38-201ENST00000259605 ZNF652Q9Y2D9 606 aa5.01□□□□□ -1.61
RNF38-201ENST00000259605 BAZ1AQ9NRL2 1556 aaPredicted RBP5□□□□□ -1.61
RNF38-201ENST00000259605 ROCK1Q13464 1354 aa5□□□□□ -1.61
RNF38-201ENST00000259605 BAG6P46379 1132 aa5□□□□□ -1.61
RNF38-201ENST00000259605 NLRP13Q86W25 1043 aa5□□□□□ -1.61
RNF38-201ENST00000259605 ERICH2A1L162 156 aa5□□□□□ -1.61
RNF38-201ENST00000259605 C11orf95C9JLR9 678 aaPredicted RBP5□□□□□ -1.61
RNF38-201ENST00000259605 PTMAP06454 111 aaKnown RBP5□□□□□ -1.61
RNF38-201ENST00000259605 CCDC18Q5T9S5 1454 aa5□□□□□ -1.61
RNF38-201ENST00000259605 LMOD1P29536 600 aaPredicted RBP4.99□□□□□ -1.61
RNF38-201ENST00000259605 RDXP35241 583 aaKnown RBP4.99□□□□□ -1.61
RNF38-201ENST00000259605 RBM42Q9BTD8 480 aaKnown RBP4.99□□□□□ -1.61
RNF38-201ENST00000259605 RBM5P52756 815 aaKnown RBP eCLIP4.99□□□□□ -1.61
RNF38-201ENST00000259605 NUP155O75694 1391 aa4.99□□□□□ -1.61
RNF38-201ENST00000259605 ZPR1O75312 459 aa4.99□□□□□ -1.61
RNF38-201ENST00000259605 TRDNQ13061 729 aa4.99□□□□□ -1.61
RNF38-201ENST00000259605 FRAT1Q92837 279 aaPredicted RBP4.99□□□□□ -1.61
RNF38-201ENST00000259605 SPG7Q9UQ90 795 aa4.99□□□□□ -1.61
RNF38-201ENST00000259605 PLEKHO1Q53GL0 409 aaPredicted RBP4.98□□□□□ -1.61
RNF38-201ENST00000259605 GTF3C3Q9Y5Q9 886 aa4.98□□□□□ -1.61
RNF38-201ENST00000259605 DHX57Q6P158 1386 aaKnown RBP4.98□□□□□ -1.61
RNF38-201ENST00000259605 DESP17661 470 aa4.98□□□□□ -1.61
RNF38-201ENST00000259605 BIN2Q9UBW5 565 aaPredicted RBP4.98□□□□□ -1.61
RNF38-201ENST00000259605 NBR1Q14596 966 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms