RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 FRAT1Q92837 279 aaPredicted RBP15.12■□□□□ 0.01
TROAP-201ENST00000257909 ZMYM4Q5VZL5 1548 aa15.12■□□□□ 0.01
TROAP-201ENST00000257909 ARHGEF12Q9NZN5 1544 aa15.12■□□□□ 0.01
TROAP-201ENST00000257909 CROCC2H7BZ55 1655 aa15.11■□□□□ 0.01
TROAP-201ENST00000257909 ZNF608Q9ULD9 1512 aaPredicted RBP15.1■□□□□ 0.01
TROAP-201ENST00000257909 PARD3Q8TEW0 1356 aa15.1■□□□□ 0.01
TROAP-201ENST00000257909 EIF5BO60841 1220 aaKnown RBP15.09■□□□□ 0.01
TROAP-201ENST00000257909 CRBNQ96SW2 442 aa15.09■□□□□ 0.01
TROAP-201ENST00000257909 PKD2Q13563 968 aa15.08■□□□□ 0.01
TROAP-201ENST00000257909 PLEKHH2Q8IVE3 1493 aa15.08■□□□□ 0
TROAP-201ENST00000257909 ST20-MTHFSA0A0A6YYL1 179 aa15.07■□□□□ 0
TROAP-201ENST00000257909 ADGRL2O95490 1459 aa15.07■□□□□ 0
TROAP-201ENST00000257909 CAMSAP2Q08AD1 1489 aa15.07■□□□□ 0
TROAP-201ENST00000257909 CDCA7LQ96GN5 454 aa15.07■□□□□ 0
TROAP-201ENST00000257909 RSPH6AQ9H0K4 717 aa15.07■□□□□ 0
TROAP-201ENST00000257909 MRC2Q9UBG0 1479 aa15.07■□□□□ 0
TROAP-201ENST00000257909 ITSN2Q9NZM3 1697 aa15.07■□□□□ 0
TROAP-201ENST00000257909 KDM2BQ8NHM5 1336 aa15.06■□□□□ 0
TROAP-201ENST00000257909 CENPQQ7L2Z9 268 aaPredicted RBP15.06■□□□□ 0
TROAP-201ENST00000257909 FAM43AQ8N2R8 423 aa15.06■□□□□ 0
TROAP-201ENST00000257909 PLIN1O60240 522 aa15.06■□□□□ 0
TROAP-201ENST00000257909 FAM161AQ3B820 660 aa15.06■□□□□ 0
TROAP-201ENST00000257909 KIAA0586Q9BVV6 1533 aa15.05■□□□□ 0
TROAP-201ENST00000257909 BLMP54132 1417 aaPredicted RBP15.05■□□□□ 0
TROAP-201ENST00000257909 PRG4Q92954 1404 aaPredicted RBP15.04■□□□□ -0
TROAP-201ENST00000257909 ADCY10Q96PN6 1610 aa15.04■□□□□ -0
TROAP-201ENST00000257909 SLC4A3P48751 1232 aa15.03■□□□□ -0
TROAP-201ENST00000257909 ANKRD30AQ9BXX3 1397 aa15.02□□□□□ -0.01
TROAP-201ENST00000257909 EIF4G3O43432 1585 aaKnown RBP15.01□□□□□ -0.01
TROAP-201ENST00000257909 SKAP1Q86WV1 359 aa15.01□□□□□ -0.01
TROAP-201ENST00000257909 TROQ12816 1431 aaPredicted RBP15.01□□□□□ -0.01
TROAP-201ENST00000257909 GPATCH8Q9UKJ3 1502 aaKnown RBP15.01□□□□□ -0.01
TROAP-201ENST00000257909 CDC42BPAQ5VT25 1732 aa15.01□□□□□ -0.01
TROAP-201ENST00000257909 C8orf34Q49A92 452 aa15.01□□□□□ -0.01
TROAP-201ENST00000257909 GRIN2AQ12879 1464 aa15.01□□□□□ -0.01
TROAP-201ENST00000257909 PLB1Q6P1J6 1458 aa14.99□□□□□ -0.01
TROAP-201ENST00000257909 FRAT2O75474 233 aaPredicted RBP14.99□□□□□ -0.01
TROAP-201ENST00000257909 ANKRD50Q9ULJ7 1429 aa14.99□□□□□ -0.01
TROAP-201ENST00000257909 IFT140Q96RY7 1462 aa14.99□□□□□ -0.01
TROAP-201ENST00000257909 PER1O15534 1290 aaPredicted RBP14.99□□□□□ -0.01
TROAP-201ENST00000257909 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
TROAP-201ENST00000257909 CEP170Q5SW79 1584 aa14.97□□□□□ -0.01
TROAP-201ENST00000257909 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
TROAP-201ENST00000257909 KDM5DQ9BY66 1539 aa14.97□□□□□ -0.01
TROAP-201ENST00000257909 KDM2AQ9Y2K7 1162 aa14.96□□□□□ -0.01
TROAP-201ENST00000257909 C20orf194Q5TEA3 1177 aa14.96□□□□□ -0.02
TROAP-201ENST00000257909 DCAF11Q8TEB1 546 aa14.96□□□□□ -0.02
TROAP-201ENST00000257909 NUP155O75694 1391 aa14.96□□□□□ -0.02
TROAP-201ENST00000257909 TRPM1Q7Z4N2 1603 aa14.93□□□□□ -0.02
TROAP-201ENST00000257909 COL17A1Q9UMD9 1497 aaPredicted RBP14.92□□□□□ -0.02
TROAP-201ENST00000257909 VIRMAQ69YN4 1812 aaKnown RBP14.92□□□□□ -0.02
TROAP-201ENST00000257909 SHANK2Q9UPX8 1470 aa14.91□□□□□ -0.02
TROAP-201ENST00000257909 CC2D1BQ5T0F9 858 aaKnown RBP14.91□□□□□ -0.02
TROAP-201ENST00000257909 DUSP27Q5VZP5 1158 aa14.91□□□□□ -0.02
TROAP-201ENST00000257909 PKNOX2Q96KN3 472 aa14.91□□□□□ -0.02
TROAP-201ENST00000257909 ZNF777Q9ULD5 760 aaPredicted RBP14.91□□□□□ -0.02
TROAP-201ENST00000257909 L1TD1Q5T7N2 865 aaKnown RBP14.9□□□□□ -0.02
TROAP-201ENST00000257909 LAMC1P11047 1609 aa14.9□□□□□ -0.02
TROAP-201ENST00000257909 PRAG1Q86YV5 1406 aa14.9□□□□□ -0.02
TROAP-201ENST00000257909 EIF3AQ14152 1382 aaKnown RBP14.89□□□□□ -0.03
TROAP-201ENST00000257909 PTPRGP23470 1445 aa14.89□□□□□ -0.03
TROAP-201ENST00000257909 GPRASP1Q5JY77 1395 aa14.89□□□□□ -0.03
TROAP-201ENST00000257909 ABCC10Q5T3U5 1492 aa14.89□□□□□ -0.03
TROAP-201ENST00000257909 RGS3P49796 1198 aa14.88□□□□□ -0.03
TROAP-201ENST00000257909 BECN1Q14457 450 aa14.88□□□□□ -0.03
TROAP-201ENST00000257909 ABCA8O94911 1581 aa14.88□□□□□ -0.03
TROAP-201ENST00000257909 GOLGA2Q08379 1002 aa14.87□□□□□ -0.03
TROAP-201ENST00000257909 ADAMTS8Q9UP79 889 aa14.87□□□□□ -0.03
TROAP-201ENST00000257909 PANK3Q9H999 370 aa14.87□□□□□ -0.03
TROAP-201ENST00000257909 C9orf84Q5VXU9 1444 aa14.86□□□□□ -0.03
TROAP-201ENST00000257909 ZNF521Q96K83 1311 aa14.86□□□□□ -0.03
TROAP-201ENST00000257909 PRDM15P57071 1507 aaPredicted RBP14.86□□□□□ -0.03
TROAP-201ENST00000257909 CLASP1Q7Z460 1538 aa14.86□□□□□ -0.03
TROAP-201ENST00000257909 PLEKHH1Q9ULM0 1364 aa14.85□□□□□ -0.03
TROAP-201ENST00000257909 MAGI1Q96QZ7 1491 aaPredicted RBP14.85□□□□□ -0.03
TROAP-201ENST00000257909 DISP3Q9P2K9 1392 aa14.84□□□□□ -0.03
TROAP-201ENST00000257909 WDR43Q15061 677 aaKnown RBP eCLIP14.84□□□□□ -0.03
TROAP-201ENST00000257909 TESK2Q96S53 571 aa14.84□□□□□ -0.03
TROAP-201ENST00000257909 POGKQ9P215 609 aa14.84□□□□□ -0.03
TROAP-201ENST00000257909 ERBINQ96RT1 1412 aa14.84□□□□□ -0.03
TROAP-201ENST00000257909 SYNJ2O15056 1496 aa14.83□□□□□ -0.04
TROAP-201ENST00000257909 TMF1P82094 1093 aa14.83□□□□□ -0.04
TROAP-201ENST00000257909 GLIPR1L2Q4G1C9 344 aa14.83□□□□□ -0.04
TROAP-201ENST00000257909 USP19O94966 1318 aa14.83□□□□□ -0.04
TROAP-201ENST00000257909 MAPK8IP3Q9UPT6 1336 aa14.82□□□□□ -0.04
TROAP-201ENST00000257909 CCDC144AA2RUR9 1427 aa14.82□□□□□ -0.04
TROAP-201ENST00000257909 TSPY4P0CV99 314 aa14.82□□□□□ -0.04
TROAP-201ENST00000257909 TSPY10P0CW01 314 aa14.82□□□□□ -0.04
TROAP-201ENST00000257909 SLFN5Q08AF3 891 aa14.82□□□□□ -0.04
TROAP-201ENST00000257909 NBPF1Q3BBV0 1214 aa14.81□□□□□ -0.04
TROAP-201ENST00000257909 RRAGDQ9NQL2 400 aaPredicted RBP14.81□□□□□ -0.04
TROAP-201ENST00000257909 NUP160Q12769 1436 aa14.81□□□□□ -0.04
TROAP-201ENST00000257909 ATP10BO94823 1461 aa14.81□□□□□ -0.04
TROAP-201ENST00000257909 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
TROAP-201ENST00000257909 CDC42BPBQ9Y5S2 1711 aa14.81□□□□□ -0.04
TROAP-201ENST00000257909 ARHGEF5Q12774 1597 aa14.8□□□□□ -0.04
TROAP-201ENST00000257909 TRMT2AQ8IZ69 625 aaKnown RBP14.8□□□□□ -0.04
TROAP-201ENST00000257909 FAM135AQ9P2D6 1515 aa14.79□□□□□ -0.04
TROAP-201ENST00000257909 SAMD9LQ8IVG5 1584 aa14.79□□□□□ -0.04
TROAP-201ENST00000257909 NKTRP30414 1462 aaKnown RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms