RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 MAGI2Q86UL8 1455 aa33.63■■■□□ 2.97
SYNGR3-201ENST00000248121 MLH3Q9UHC1 1453 aa33.62■■■□□ 2.97
SYNGR3-201ENST00000248121 ANKRD30BQ9BXX2 1392 aa33.61■■■□□ 2.97
SYNGR3-201ENST00000248121 IQGAP3Q86VI3 1631 aa33.6■■■□□ 2.97
SYNGR3-201ENST00000248121 PKD2Q13563 968 aa33.59■■■□□ 2.97
SYNGR3-201ENST00000248121 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.59■■■□□ 2.97
SYNGR3-201ENST00000248121 DEPDC5O75140 1603 aa33.57■■■□□ 2.96
SYNGR3-201ENST00000248121 TEX14Q8IWB6 1497 aa33.57■■■□□ 2.96
SYNGR3-201ENST00000248121 EIF2AK4Q9P2K8 1649 aaKnown RBP33.54■■■□□ 2.96
SYNGR3-201ENST00000248121 DHX29Q7Z478 1369 aaKnown RBP33.54■■■□□ 2.96
SYNGR3-201ENST00000248121 DIP2CQ9Y2E4 1556 aa33.53■■■□□ 2.96
SYNGR3-201ENST00000248121 MROH1Q8NDA8 1641 aa33.52■■■□□ 2.96
SYNGR3-201ENST00000248121 A2MP01023 1474 aa33.52■■■□□ 2.96
SYNGR3-201ENST00000248121 DNAJC5Q9H3Z4 198 aa33.51■■■□□ 2.95
SYNGR3-201ENST00000248121 YEATS2Q9ULM3 1422 aa33.49■■■□□ 2.95
SYNGR3-201ENST00000248121 COL17A1Q9UMD9 1497 aaPredicted RBP33.47■■■□□ 2.95
SYNGR3-201ENST00000248121 ZMYM4Q5VZL5 1548 aa33.46■■■□□ 2.95
SYNGR3-201ENST00000248121 KIF3BO15066 747 aa33.46■■■□□ 2.95
SYNGR3-201ENST00000248121 RPRD2Q5VT52 1461 aaKnown RBP33.46■■■□□ 2.95
SYNGR3-201ENST00000248121 PRDM15P57071 1507 aaPredicted RBP33.43■■■□□ 2.94
SYNGR3-201ENST00000248121 VWDEQ8N2E2 1590 aa33.42■■■□□ 2.94
SYNGR3-201ENST00000248121 MIER1Q8N108 512 aa33.41■■■□□ 2.94
SYNGR3-201ENST00000248121 RNF17Q9BXT8 1623 aaKnown RBP33.4■■■□□ 2.94
SYNGR3-201ENST00000248121 E9PCH4 1651 aa33.4■■■□□ 2.94
SYNGR3-201ENST00000248121 BCORL1Q5H9F3 1711 aa33.37■■■□□ 2.93
SYNGR3-201ENST00000248121 CEP152O94986 1710 aa33.35■■■□□ 2.93
SYNGR3-201ENST00000248121 PLA2R1Q13018 1463 aa33.35■■■□□ 2.93
SYNGR3-201ENST00000248121 TET3O43151 1660 aa33.34■■■□□ 2.93
SYNGR3-201ENST00000248121 L3MBTL2Q969R5 705 aa33.32■■■□□ 2.92
SYNGR3-201ENST00000248121 SIGLEC1Q9BZZ2 1709 aa33.29■■■□□ 2.92
SYNGR3-201ENST00000248121 KANK1Q14678 1352 aa33.25■■■□□ 2.91
SYNGR3-201ENST00000248121 TRHP20396 242 aaPredicted RBP33.24■■■□□ 2.91
SYNGR3-201ENST00000248121 GGT6Q6P531 493 aa33.23■■■□□ 2.91
SYNGR3-201ENST00000248121 HIRIP3Q9BW71 556 aaPredicted RBP33.23■■■□□ 2.91
SYNGR3-201ENST00000248121 SPHKAPQ2M3C7 1700 aa33.23■■■□□ 2.91
SYNGR3-201ENST00000248121 ATP10AO60312 1499 aa33.22■■■□□ 2.91
SYNGR3-201ENST00000248121 EFCAB6Q5THR3 1501 aa33.21■■■□□ 2.91
SYNGR3-201ENST00000248121 ARHGEF40Q8TER5 1519 aa33.2■■■□□ 2.91
SYNGR3-201ENST00000248121 LMTK2Q8IWU2 1503 aa33.19■■■□□ 2.9
SYNGR3-201ENST00000248121 CCDC144AA2RUR9 1427 aa33.18■■■□□ 2.9
SYNGR3-201ENST00000248121 ABCC3O15438 1527 aa33.16■■■□□ 2.9
SYNGR3-201ENST00000248121 REREQ9P2R6 1566 aa33.15■■■□□ 2.9
SYNGR3-201ENST00000248121 CFAP65Q6ZU64 1925 aaKnown RBP33.14■■■□□ 2.9
SYNGR3-201ENST00000248121 TRPM2O94759 1503 aa33.14■■■□□ 2.89
SYNGR3-201ENST00000248121 CAMSAP1Q5T5Y3 1602 aa33.12■■■□□ 2.89
SYNGR3-201ENST00000248121 NBPF8Q3BBV2 869 aa33.12■■■□□ 2.89
SYNGR3-201ENST00000248121 CLTCL1P53675 1640 aa33.12■■■□□ 2.89
SYNGR3-201ENST00000248121 PTPRTO14522 1441 aa33.11■■■□□ 2.89
SYNGR3-201ENST00000248121 UGGT1Q9NYU2 1555 aa33.09■■■□□ 2.89
SYNGR3-201ENST00000248121 NPATQ14207 1427 aa33.06■■■□□ 2.88
SYNGR3-201ENST00000248121 WASHC2CQ9Y4E1 1318 aa33.05■■■□□ 2.88
SYNGR3-201ENST00000248121 ZC3H13Q5T200 1668 aaKnown RBP33.05■■■□□ 2.88
SYNGR3-201ENST00000248121 AGLP35573 1532 aa33.05■■■□□ 2.88
SYNGR3-201ENST00000248121 DDX10Q13206 875 aaKnown RBP33.05■■■□□ 2.88
SYNGR3-201ENST00000248121 HSPA5P11021 654 aaKnown RBP33■■■□□ 2.87
SYNGR3-201ENST00000248121 RGL3Q3MIN7 710 aa32.99■■■□□ 2.87
SYNGR3-201ENST00000248121 SPATA31E1Q6ZUB1 1445 aa32.96■■■□□ 2.87
SYNGR3-201ENST00000248121 ZNF326Q5BKZ1 582 aaKnown RBP32.96■■■□□ 2.87
SYNGR3-201ENST00000248121 DCAF11Q8TEB1 546 aa32.95■■■□□ 2.86
SYNGR3-201ENST00000248121 KDM2AQ9Y2K7 1162 aa32.95■■■□□ 2.86
SYNGR3-201ENST00000248121 EIF4G2P78344 907 aaKnown RBP eCLIP32.94■■■□□ 2.86
SYNGR3-201ENST00000248121 CLTCQ00610 1675 aaKnown RBP32.94■■■□□ 2.86
SYNGR3-201ENST00000248121 MROH2AA6NES4 1674 aa32.93■■■□□ 2.86
SYNGR3-201ENST00000248121 MLECQ14165 292 aa32.92■■■□□ 2.86
SYNGR3-201ENST00000248121 UHRF1BP1Q6BDS2 1440 aa32.91■■■□□ 2.86
SYNGR3-201ENST00000248121 SYNMO15061 1565 aa32.9■■■□□ 2.86
SYNGR3-201ENST00000248121 KIF1BO60333 1816 aa32.9■■■□□ 2.86
SYNGR3-201ENST00000248121 YTHDC1Q96MU7 727 aaKnown RBP32.89■■■□□ 2.86
SYNGR3-201ENST00000248121 PREX1Q8TCU6 1659 aa32.86■■■□□ 2.85
SYNGR3-201ENST00000248121 ARHGAP31Q2M1Z3 1444 aa32.86■■■□□ 2.85
SYNGR3-201ENST00000248121 NOS1P29475 1434 aa32.85■■■□□ 2.85
SYNGR3-201ENST00000248121 CNTLNQ9NXG0 1405 aa32.83■■■□□ 2.85
SYNGR3-201ENST00000248121 CENPBP07199 599 aaPredicted RBP32.83■■■□□ 2.85
SYNGR3-201ENST00000248121 WASHC2AQ641Q2 1341 aa32.83■■■□□ 2.85
SYNGR3-201ENST00000248121 PRAG1Q86YV5 1406 aa32.82■■■□□ 2.84
SYNGR3-201ENST00000248121 PIK3C2BO00750 1634 aa32.82■■■□□ 2.84
SYNGR3-201ENST00000248121 TRPM1Q7Z4N2 1603 aa32.82■■■□□ 2.84
SYNGR3-201ENST00000248121 RALGAPBQ86X10 1494 aa32.81■■■□□ 2.84
SYNGR3-201ENST00000248121 ADGRB3O60242 1522 aa32.79■■■□□ 2.84
SYNGR3-201ENST00000248121 NEURL4Q96JN8 1562 aa32.77■■■□□ 2.84
SYNGR3-201ENST00000248121 IFT172Q9UG01 1749 aa32.77■■■□□ 2.84
SYNGR3-201ENST00000248121 ARID4BQ4LE39 1312 aaPredicted RBP32.76■■■□□ 2.84
SYNGR3-201ENST00000248121 C11orf95C9JLR9 678 aaPredicted RBP32.76■■■□□ 2.83
SYNGR3-201ENST00000248121 MADDQ8WXG6 1647 aa32.75■■■□□ 2.83
SYNGR3-201ENST00000248121 FBXO31Q5XUX0 539 aaPredicted RBP32.75■■■□□ 2.83
SYNGR3-201ENST00000248121 ERVK-7P63135 1459 aa32.72■■■□□ 2.83
SYNGR3-201ENST00000248121 MYO5BQ9ULV0 1848 aa32.71■■■□□ 2.83
SYNGR3-201ENST00000248121 PPP6R1Q9UPN7 881 aa32.7■■■□□ 2.82
SYNGR3-201ENST00000248121 CHGAP10645 457 aaKnown RBP32.68■■■□□ 2.82
SYNGR3-201ENST00000248121 USP47Q96K76 1375 aa32.68■■■□□ 2.82
SYNGR3-201ENST00000248121 CCDC7Q96M83 1385 aa32.68■■■□□ 2.82
SYNGR3-201ENST00000248121 POLR1AO95602 1720 aaPredicted RBP32.67■■■□□ 2.82
SYNGR3-201ENST00000248121 PPLO60437 1756 aa32.66■■■□□ 2.82
SYNGR3-201ENST00000248121 NBPF1Q3BBV0 1214 aa32.65■■■□□ 2.82
SYNGR3-201ENST00000248121 SPATA31D1Q6ZQQ2 1576 aa32.64■■■□□ 2.82
SYNGR3-201ENST00000248121 ROCK2O75116 1388 aaKnown RBP32.64■■■□□ 2.82
SYNGR3-201ENST00000248121 IDI1Q13907 227 aa32.63■■■□□ 2.81
SYNGR3-201ENST00000248121 SCAF1Q9H7N4 1312 aaKnown RBP32.62■■■□□ 2.81
SYNGR3-201ENST00000248121 CARD11Q9BXL7 1154 aa32.62■■■□□ 2.81
SYNGR3-201ENST00000248121 ANP32CO43423 234 aa32.61■■■□□ 2.81
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms