RNA–Protein interactions for RNA: ENST00000247005.7

GDF1-201, Transcript of growth differentiation factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GDF1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1-201ENST00000247005 NEFLP07196 543 aa33.09■■■□□ 2.89
GDF1-201ENST00000247005 EFCAB2Q5VUJ9 269 aa33.09■■■□□ 2.89
GDF1-201ENST00000247005 ST20-MTHFSA0A0A6YYL1 179 aa33.07■■■□□ 2.88
GDF1-201ENST00000247005 CCDC144AA2RUR9 1427 aa33.06■■■□□ 2.88
GDF1-201ENST00000247005 PLA2R1Q13018 1463 aa33.05■■■□□ 2.88
GDF1-201ENST00000247005 UHRF1BP1LA0JNW5 1464 aa33.05■■■□□ 2.88
GDF1-201ENST00000247005 DHX29Q7Z478 1369 aaKnown RBP33.04■■■□□ 2.88
GDF1-201ENST00000247005 TRAPPC8Q9Y2L5 1435 aa33.03■■■□□ 2.88
GDF1-201ENST00000247005 UNC13BO14795 1591 aa33.02■■■□□ 2.88
GDF1-201ENST00000247005 PLXNC1O60486 1568 aa33■■■□□ 2.87
GDF1-201ENST00000247005 ROCK2O75116 1388 aaKnown RBP33■■■□□ 2.87
GDF1-201ENST00000247005 AFAP1Q8N556 730 aa32.99■■■□□ 2.87
GDF1-201ENST00000247005 DUOX2Q9NRD8 1548 aa32.96■■■□□ 2.87
GDF1-201ENST00000247005 NBPF1Q3BBV0 1214 aa32.96■■■□□ 2.87
GDF1-201ENST00000247005 ABCC1P33527 1531 aa32.93■■■□□ 2.86
GDF1-201ENST00000247005 ARID4BQ4LE39 1312 aaPredicted RBP32.92■■■□□ 2.86
GDF1-201ENST00000247005 IRX6P78412 446 aaPredicted RBP32.92■■■□□ 2.86
GDF1-201ENST00000247005 PRAG1Q86YV5 1406 aa32.91■■■□□ 2.86
GDF1-201ENST00000247005 IQGAP3Q86VI3 1631 aa32.91■■■□□ 2.86
GDF1-201ENST00000247005 TSHZ2Q9NRE2 1034 aa32.91■■■□□ 2.86
GDF1-201ENST00000247005 SPAG9O60271 1321 aaKnown RBP32.9■■■□□ 2.86
GDF1-201ENST00000247005 ERBINQ96RT1 1412 aa32.89■■■□□ 2.86
GDF1-201ENST00000247005 A2MP01023 1474 aa32.88■■■□□ 2.85
GDF1-201ENST00000247005 MAGI2Q86UL8 1455 aa32.83■■■□□ 2.85
GDF1-201ENST00000247005 SENP3-EIF4A1A0A087X0R7 540 aa32.82■■■□□ 2.84
GDF1-201ENST00000247005 TRPM1Q7Z4N2 1603 aa32.82■■■□□ 2.84
GDF1-201ENST00000247005 WDR7Q9Y4E6 1490 aa32.8■■■□□ 2.84
GDF1-201ENST00000247005 ZBED9Q6R2W3 1325 aa32.8■■■□□ 2.84
GDF1-201ENST00000247005 MYT1LQ9UL68 1186 aa32.77■■■□□ 2.84
GDF1-201ENST00000247005 FANCAO15360 1455 aa32.73■■■□□ 2.83
GDF1-201ENST00000247005 ZFYVE16Q7Z3T8 1539 aa32.73■■■□□ 2.83
GDF1-201ENST00000247005 ATP10AO60312 1499 aa32.73■■■□□ 2.83
GDF1-201ENST00000247005 RTEL1-TNFRSF6BF6WH68 1400 aa32.7■■■□□ 2.82
GDF1-201ENST00000247005 GPRASP1Q5JY77 1395 aa32.7■■■□□ 2.82
GDF1-201ENST00000247005 TMC1Q8TDI8 760 aa32.7■■■□□ 2.82
GDF1-201ENST00000247005 ARAP3Q8WWN8 1544 aa32.68■■■□□ 2.82
GDF1-201ENST00000247005 PNISRQ8TF01 805 aaKnown RBP32.67■■■□□ 2.82
GDF1-201ENST00000247005 SCAPERQ9BY12 1400 aa32.67■■■□□ 2.82
GDF1-201ENST00000247005 ASXL2Q76L83 1435 aa32.66■■■□□ 2.82
GDF1-201ENST00000247005 TESK2Q96S53 571 aa32.66■■■□□ 2.82
GDF1-201ENST00000247005 E9PCH4 1651 aa32.65■■■□□ 2.82
GDF1-201ENST00000247005 KIF3BO15066 747 aa32.65■■■□□ 2.82
GDF1-201ENST00000247005 DISP3Q9P2K9 1392 aa32.64■■■□□ 2.82
GDF1-201ENST00000247005 ADGRL1O94910 1474 aa32.62■■■□□ 2.81
GDF1-201ENST00000247005 ABCA9Q8IUA7 1624 aa32.62■■■□□ 2.81
GDF1-201ENST00000247005 ATP7AQ04656 1500 aa32.61■■■□□ 2.81
GDF1-201ENST00000247005 PRDM15P57071 1507 aaPredicted RBP32.6■■■□□ 2.81
GDF1-201ENST00000247005 MYBBP1AQ9BQG0 1328 aaKnown RBP32.58■■■□□ 2.81
GDF1-201ENST00000247005 RALBP1Q15311 655 aa32.56■■■□□ 2.8
GDF1-201ENST00000247005 PER1O15534 1290 aaPredicted RBP32.55■■■□□ 2.8
GDF1-201ENST00000247005 COL17A1Q9UMD9 1497 aaPredicted RBP32.54■■■□□ 2.8
GDF1-201ENST00000247005 EIF2AK4Q9P2K8 1649 aaKnown RBP32.54■■■□□ 2.8
GDF1-201ENST00000247005 INO80Q9ULG1 1556 aaPredicted RBP32.54■■■□□ 2.8
GDF1-201ENST00000247005 OSCARQ8IYS5 282 aa32.54■■■□□ 2.8
GDF1-201ENST00000247005 LAMC1P11047 1609 aa32.51■■■□□ 2.8
GDF1-201ENST00000247005 TRPM2O94759 1503 aa32.51■■■□□ 2.8
GDF1-201ENST00000247005 KANK1Q14678 1352 aa32.51■■■□□ 2.79
GDF1-201ENST00000247005 PTPRTO14522 1441 aa32.51■■■□□ 2.79
GDF1-201ENST00000247005 CC2D1BQ5T0F9 858 aaKnown RBP32.5■■■□□ 2.79
GDF1-201ENST00000247005 PANK3Q9H999 370 aa32.5■■■□□ 2.79
GDF1-201ENST00000247005 DEPDC5O75140 1603 aa32.5■■■□□ 2.79
GDF1-201ENST00000247005 NPM1P06748 294 aaKnown RBP eCLIP32.49■■■□□ 2.79
GDF1-201ENST00000247005 TMF1P82094 1093 aa32.49■■■□□ 2.79
GDF1-201ENST00000247005 CLTCL1P53675 1640 aa32.49■■■□□ 2.79
GDF1-201ENST00000247005 BRD4O60885 1362 aaPredicted RBP32.49■■■□□ 2.79
GDF1-201ENST00000247005 KTN1Q86UP2 1357 aaKnown RBP32.49■■■□□ 2.79
GDF1-201ENST00000247005 SPHKAPQ2M3C7 1700 aa32.47■■■□□ 2.79
GDF1-201ENST00000247005 PARD3Q8TEW0 1356 aa32.45■■■□□ 2.79
GDF1-201ENST00000247005 MADDQ8WXG6 1647 aa32.45■■■□□ 2.78
GDF1-201ENST00000247005 TET3O43151 1660 aa32.44■■■□□ 2.78
GDF1-201ENST00000247005 SMG6Q86US8 1419 aaKnown RBP32.44■■■□□ 2.78
GDF1-201ENST00000247005 LRPPRCP42704 1394 aaKnown RBP32.44■■■□□ 2.78
GDF1-201ENST00000247005 NUDCQ9Y266 331 aa32.43■■■□□ 2.78
GDF1-201ENST00000247005 RNF17Q9BXT8 1623 aaKnown RBP32.42■■■□□ 2.78
GDF1-201ENST00000247005 NLRP13Q86W25 1043 aa32.42■■■□□ 2.78
GDF1-201ENST00000247005 VWDEQ8N2E2 1590 aa32.42■■■□□ 2.78
GDF1-201ENST00000247005 PPP4R2Q9NY27 417 aa32.41■■■□□ 2.78
GDF1-201ENST00000247005 UGGT1Q9NYU2 1555 aa32.41■■■□□ 2.78
GDF1-201ENST00000247005 CEP152O94986 1710 aa32.41■■■□□ 2.78
GDF1-201ENST00000247005 SALL2Q9Y467 1007 aaPredicted RBP32.4■■■□□ 2.78
GDF1-201ENST00000247005 MROH1Q8NDA8 1641 aa32.39■■■□□ 2.78
GDF1-201ENST00000247005 ERICH6BQ5W0A0 696 aa32.38■■■□□ 2.77
GDF1-201ENST00000247005 B4GALNT3Q6L9W6 998 aa32.37■■■□□ 2.77
GDF1-201ENST00000247005 KIDINS220Q9ULH0 1771 aa32.37■■■□□ 2.77
GDF1-201ENST00000247005 RBM19Q9Y4C8 960 aaKnown RBP32.36■■■□□ 2.77
GDF1-201ENST00000247005 CD109Q6YHK3 1445 aa32.34■■■□□ 2.77
GDF1-201ENST00000247005 ZNF518AQ6AHZ1 1483 aa32.32■■■□□ 2.76
GDF1-201ENST00000247005 CFAP70Q5T0N1 1121 aa32.31■■■□□ 2.76
GDF1-201ENST00000247005 ADGRF5Q8IZF2 1346 aa32.3■■■□□ 2.76
GDF1-201ENST00000247005 GGT6Q6P531 493 aa32.29■■■□□ 2.76
GDF1-201ENST00000247005 IQGAP1P46940 1657 aa32.29■■■□□ 2.76
GDF1-201ENST00000247005 SCAF11Q99590 1463 aaKnown RBP32.29■■■□□ 2.76
GDF1-201ENST00000247005 WASHC2CQ9Y4E1 1318 aa32.28■■■□□ 2.76
GDF1-201ENST00000247005 STAC3Q96MF2 364 aa32.27■■■□□ 2.76
GDF1-201ENST00000247005 CHGAP10645 457 aaKnown RBP32.25■■■□□ 2.75
GDF1-201ENST00000247005 EFCAB6Q5THR3 1501 aa32.24■■■□□ 2.75
GDF1-201ENST00000247005 PPRC1Q5VV67 1664 aaKnown RBP32.23■■■□□ 2.75
GDF1-201ENST00000247005 POGZQ7Z3K3 1410 aa32.22■■■□□ 2.75
GDF1-201ENST00000247005 RAPGEF3O95398 923 aa32.22■■■□□ 2.75
GDF1-201ENST00000247005 KNSTRNQ9Y448 316 aa32.21■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms