RNA–Protein interactions for RNA: ENST00000244769.8

ATXN1-201, Transcript of ataxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN1, Length 10,602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-201ENST00000244769 MLECQ14165 292 aa11.08□□□□□ -0.64
ATXN1-201ENST00000244769 ST18O60284 1047 aa11.08□□□□□ -0.64
ATXN1-201ENST00000244769 RDXP35241 583 aaKnown RBP11.08□□□□□ -0.64
ATXN1-201ENST00000244769 NGDNQ8NEJ9 315 aaKnown RBP11.08□□□□□ -0.64
ATXN1-201ENST00000244769 NAP1L5Q96NT1 182 aaPredicted RBP11.08□□□□□ -0.64
ATXN1-201ENST00000244769 IPO7O95373 1038 aaKnown RBP11.08□□□□□ -0.64
ATXN1-201ENST00000244769 ANKRD20A12PQ8NF67 263 aa11.08□□□□□ -0.64
ATXN1-201ENST00000244769 EVA1CP58658 441 aa11.08□□□□□ -0.64
ATXN1-201ENST00000244769 SETQ01105 290 aaPredicted RBP11.08□□□□□ -0.64
ATXN1-201ENST00000244769 CNKSR2Q8WXI2 1034 aa11.07□□□□□ -0.64
ATXN1-201ENST00000244769 AMPHP49418 695 aa11.07□□□□□ -0.64
ATXN1-201ENST00000244769 ZNF330Q9Y3S2 320 aaPredicted RBP11.07□□□□□ -0.64
ATXN1-201ENST00000244769 VPS8Q8N3P4 1428 aa11.07□□□□□ -0.64
ATXN1-201ENST00000244769 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.06□□□□□ -0.64
ATXN1-201ENST00000244769 CC2D1BQ5T0F9 858 aaKnown RBP11.06□□□□□ -0.64
ATXN1-201ENST00000244769 SUPT16HQ9Y5B9 1047 aaKnown RBP11.06□□□□□ -0.64
ATXN1-201ENST00000244769 WWC2Q6AWC2 1192 aa11.06□□□□□ -0.64
ATXN1-201ENST00000244769 NGEFQ8N5V2 710 aa11.06□□□□□ -0.64
ATXN1-201ENST00000244769 RGS3P49796 1198 aa11.06□□□□□ -0.64
ATXN1-201ENST00000244769 C1orf141Q5JVX7 400 aa11.05□□□□□ -0.64
ATXN1-201ENST00000244769 VPS53Q5VIR6 699 aa11.05□□□□□ -0.64
ATXN1-201ENST00000244769 CWC22Q9HCG8 908 aaKnown RBP11.05□□□□□ -0.64
ATXN1-201ENST00000244769 TPD52L1Q16890 204 aaPredicted RBP11.05□□□□□ -0.64
ATXN1-201ENST00000244769 ROCK1Q13464 1354 aa11.05□□□□□ -0.64
ATXN1-201ENST00000244769 SMARCA4P51532 1647 aa11.05□□□□□ -0.64
ATXN1-201ENST00000244769 R3HCC1Q9Y3T6 440 aaKnown RBP11.05□□□□□ -0.64
ATXN1-201ENST00000244769 SETD5Q9C0A6 1442 aa11.04□□□□□ -0.64
ATXN1-201ENST00000244769 TPRNQ4KMQ1 711 aa11.04□□□□□ -0.64
ATXN1-201ENST00000244769 RAPGEF2Q9Y4G8 1499 aa11.04□□□□□ -0.64
ATXN1-201ENST00000244769 SF3A1Q15459 793 aaKnown RBP11.04□□□□□ -0.64
ATXN1-201ENST00000244769 CCDC43Q96MW1 224 aaKnown RBP11.03□□□□□ -0.64
ATXN1-201ENST00000244769 SOX12O15370 315 aa11.03□□□□□ -0.64
ATXN1-201ENST00000244769 WASHC2CQ9Y4E1 1318 aa11.03□□□□□ -0.64
ATXN1-201ENST00000244769 CCER2I3L3R5 266 aa11.03□□□□□ -0.64
ATXN1-201ENST00000244769 TRIM6-TRIM34B2RNG4 842 aa11.03□□□□□ -0.64
ATXN1-201ENST00000244769 U2AF1L5P0DN76 240 aaPredicted RBP11.03□□□□□ -0.64
ATXN1-201ENST00000244769 U2AF1Q01081 240 aaKnown RBP eCLIP11.03□□□□□ -0.646e-7■□□□□ 9.4
ATXN1-201ENST00000244769 STAC3Q96MF2 364 aa11.03□□□□□ -0.64
ATXN1-201ENST00000244769 CARMIL1Q5VZK9 1371 aa11.03□□□□□ -0.64
ATXN1-201ENST00000244769 CDR1P51861 262 aa11.03□□□□□ -0.64
ATXN1-201ENST00000244769 NOP58Q9Y2X3 529 aaKnown RBP11.02□□□□□ -0.65
ATXN1-201ENST00000244769 TRIM29Q14134 588 aa11.02□□□□□ -0.65
ATXN1-201ENST00000244769 DDX58O95786 925 aaKnown RBP11.02□□□□□ -0.65
ATXN1-201ENST00000244769 TTC5Q8N0Z6 440 aa11.01□□□□□ -0.65
ATXN1-201ENST00000244769 ERICH2A1L162 156 aa11.01□□□□□ -0.65
ATXN1-201ENST00000244769 RUFY2Q8WXA3 655 aa11.01□□□□□ -0.65
ATXN1-201ENST00000244769 FHOD3Q2V2M9 1422 aa11.01□□□□□ -0.65
ATXN1-201ENST00000244769 GOLGA6L19H0YKK7 550 aa11.01□□□□□ -0.65
ATXN1-201ENST00000244769 TNNT3P45378 269 aaPredicted RBP11.01□□□□□ -0.65
ATXN1-201ENST00000244769 VPS37DQ86XT2 251 aa11.01□□□□□ -0.65
ATXN1-201ENST00000244769 MEX3CQ5U5Q3 659 aaKnown RBP11□□□□□ -0.65
ATXN1-201ENST00000244769 VGFO15240 615 aaPredicted RBP11□□□□□ -0.65
ATXN1-201ENST00000244769 TRDNQ13061 729 aa11□□□□□ -0.65
ATXN1-201ENST00000244769 FAM184AQ8NB25 1140 aa11□□□□□ -0.65
ATXN1-201ENST00000244769 ITPRIPQ8IWB1 547 aa10.99□□□□□ -0.65
ATXN1-201ENST00000244769 ODF2Q5BJF6 829 aa10.99□□□□□ -0.65
ATXN1-201ENST00000244769 H3BQV1 296 aa10.99□□□□□ -0.65
ATXN1-201ENST00000244769 IFFO2Q5TF58 517 aa10.99□□□□□ -0.65
ATXN1-201ENST00000244769 RNF20Q5VTR2 975 aa10.99□□□□□ -0.65
ATXN1-201ENST00000244769 TEFQ10587 303 aa10.98□□□□□ -0.65
ATXN1-201ENST00000244769 PDE3BQ13370 1112 aa10.98□□□□□ -0.65
ATXN1-201ENST00000244769 STK26Q9P289 416 aa10.98□□□□□ -0.65
ATXN1-201ENST00000244769 MYO6Q9UM54 1294 aa10.98□□□□□ -0.65
ATXN1-201ENST00000244769 XBP1P17861 261 aa10.97□□□□□ -0.65
ATXN1-201ENST00000244769 ZKSCAN1P17029 563 aaPredicted RBP10.97□□□□□ -0.65
ATXN1-201ENST00000244769 RAB3GAP2Q9H2M9 1393 aa10.96□□□□□ -0.65
ATXN1-201ENST00000244769 CCDC173Q0VFZ6 552 aa10.96□□□□□ -0.65
ATXN1-201ENST00000244769 TOMM22Q9NS69 142 aa10.96□□□□□ -0.65
ATXN1-201ENST00000244769 NUP155O75694 1391 aa10.96□□□□□ -0.66
ATXN1-201ENST00000244769 TRIM21P19474 475 aaKnown RBP10.95□□□□□ -0.66
ATXN1-201ENST00000244769 EVC2Q86UK5 1308 aa10.95□□□□□ -0.66
ATXN1-201ENST00000244769 PES1O00541 588 aaKnown RBP10.95□□□□□ -0.66
ATXN1-201ENST00000244769 SF3B2Q13435 895 aaKnown RBP10.95□□□□□ -0.66
ATXN1-201ENST00000244769 BRMS1Q9HCU9 246 aa10.95□□□□□ -0.66
ATXN1-201ENST00000244769 CGNL1Q0VF96 1302 aa10.95□□□□□ -0.66
ATXN1-201ENST00000244769 SKOR2Q2VWA4 1001 aaPredicted RBP10.95□□□□□ -0.66
ATXN1-201ENST00000244769 MFAP1P55081 439 aaKnown RBP10.94□□□□□ -0.66
ATXN1-201ENST00000244769 HSP90AB4PQ58FF6 505 aa10.94□□□□□ -0.66
ATXN1-201ENST00000244769 KIF3BO15066 747 aa10.94□□□□□ -0.66
ATXN1-201ENST00000244769 RRP12Q5JTH9 1297 aaKnown RBP10.93□□□□□ -0.66
ATXN1-201ENST00000244769 HSPA5P11021 654 aaKnown RBP10.93□□□□□ -0.66
ATXN1-201ENST00000244769 RBM33Q96EV2 1170 aaKnown RBP10.93□□□□□ -0.66
ATXN1-201ENST00000244769 COG3Q96JB2 828 aa10.93□□□□□ -0.66
ATXN1-201ENST00000244769 REC8O95072 547 aa10.93□□□□□ -0.66
ATXN1-201ENST00000244769 BECN2A8MW95 431 aa10.93□□□□□ -0.66
ATXN1-201ENST00000244769 MSH5O43196 834 aa10.93□□□□□ -0.66
ATXN1-201ENST00000244769 DDX11L8A8MPP1 907 aa10.93□□□□□ -0.66
ATXN1-201ENST00000244769 SAFB2Q14151 953 aaKnown RBP eCLIP10.93□□□□□ -0.66
ATXN1-201ENST00000244769 DNAI2Q9GZS0 605 aa10.92□□□□□ -0.66
ATXN1-201ENST00000244769 MIA2Q96PC5 1412 aa10.92□□□□□ -0.66
ATXN1-201ENST00000244769 AAMPQ13685 434 aa10.92□□□□□ -0.66
ATXN1-201ENST00000244769 CCAR1Q8IX12 1150 aaKnown RBP10.92□□□□□ -0.66
ATXN1-201ENST00000244769 ZRSR2Q15696 482 aaKnown RBP10.92□□□□□ -0.66
ATXN1-201ENST00000244769 CCDC144AA2RUR9 1427 aa10.92□□□□□ -0.66
ATXN1-201ENST00000244769 WDHD1O75717 1129 aaPredicted RBP10.92□□□□□ -0.66
ATXN1-201ENST00000244769 CT47A1Q5JQC4 288 aaPredicted RBP10.91□□□□□ -0.66
ATXN1-201ENST00000244769 SAFBQ15424 915 aaKnown RBP eCLIP10.91□□□□□ -0.66
ATXN1-201ENST00000244769 C9orf78Q9NZ63 289 aaPredicted RBP10.91□□□□□ -0.66
ATXN1-201ENST00000244769 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
ATXN1-201ENST00000244769 CREBRFQ8IUR6 639 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms