RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 UBE2Q2Q8WVN8 375 aa12□□□□□ -0.49
SRSF6-201ENST00000244020 C20orf194Q5TEA3 1177 aa11.99□□□□□ -0.49
SRSF6-201ENST00000244020 NUP155O75694 1391 aa11.99□□□□□ -0.49
SRSF6-201ENST00000244020 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
SRSF6-201ENST00000244020 KIAA1107Q9UPP5 1409 aa11.98□□□□□ -0.49
SRSF6-201ENST00000244020 ABCA5Q8WWZ7 1642 aa11.98□□□□□ -0.49
SRSF6-201ENST00000244020 TSPY4P0CV99 314 aa11.96□□□□□ -0.49
SRSF6-201ENST00000244020 TSPY10P0CW01 314 aa11.96□□□□□ -0.49
SRSF6-201ENST00000244020 SAMD9Q5K651 1589 aa11.96□□□□□ -0.5
SRSF6-201ENST00000244020 BECN1Q14457 450 aa11.96□□□□□ -0.5
SRSF6-201ENST00000244020 ARHGEF11O15085 1522 aa11.96□□□□□ -0.5
SRSF6-201ENST00000244020 LRRIQ1Q96JM4 1722 aa11.96□□□□□ -0.5
SRSF6-201ENST00000244020 SLKQ9H2G2 1235 aaPredicted RBP11.95□□□□□ -0.5
SRSF6-201ENST00000244020 ANKRD30AQ9BXX3 1397 aa11.95□□□□□ -0.5
SRSF6-201ENST00000244020 PKNOX2Q96KN3 472 aa11.95□□□□□ -0.5
SRSF6-201ENST00000244020 PODXL2Q9NZ53 605 aa11.95□□□□□ -0.5
SRSF6-201ENST00000244020 PANK3Q9H999 370 aa11.95□□□□□ -0.5
SRSF6-201ENST00000244020 UPF2Q9HAU5 1272 aaKnown RBP11.95□□□□□ -0.5
SRSF6-201ENST00000244020 BCORL1Q5H9F3 1711 aa11.94□□□□□ -0.5
SRSF6-201ENST00000244020 FAM43AQ8N2R8 423 aa11.94□□□□□ -0.5
SRSF6-201ENST00000244020 NESP48681 1621 aa11.94□□□□□ -0.5
SRSF6-201ENST00000244020 ADAMTS8Q9UP79 889 aa11.93□□□□□ -0.5
SRSF6-201ENST00000244020 GOLGA2Q08379 1002 aa11.92□□□□□ -0.5
SRSF6-201ENST00000244020 POLR1AO95602 1720 aaPredicted RBP11.92□□□□□ -0.5
SRSF6-201ENST00000244020 DNTTIP2Q5QJE6 756 aaKnown RBP11.92□□□□□ -0.5
SRSF6-201ENST00000244020 PZPP20742 1482 aa11.91□□□□□ -0.5
SRSF6-201ENST00000244020 C8orf34Q49A92 452 aa11.91□□□□□ -0.5
SRSF6-201ENST00000244020 KNSTRNQ9Y448 316 aa11.91□□□□□ -0.5
SRSF6-201ENST00000244020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.56e-11■■□□□ 12.6
SRSF6-201ENST00000244020 L1TD1Q5T7N2 865 aaKnown RBP11.9□□□□□ -0.5
SRSF6-201ENST00000244020 ANKRD50Q9ULJ7 1429 aa11.9□□□□□ -0.5
SRSF6-201ENST00000244020 TMF1P82094 1093 aa11.9□□□□□ -0.5
SRSF6-201ENST00000244020 NBPF1Q3BBV0 1214 aa11.89□□□□□ -0.51
SRSF6-201ENST00000244020 KDM5CP41229 1560 aa11.89□□□□□ -0.51
SRSF6-201ENST00000244020 POGKQ9P215 609 aa11.89□□□□□ -0.51
SRSF6-201ENST00000244020 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
SRSF6-201ENST00000244020 RALGAPBQ86X10 1494 aa11.89□□□□□ -0.51
SRSF6-201ENST00000244020 PNNQ9H307 717 aaKnown RBP11.88□□□□□ -0.51
SRSF6-201ENST00000244020 KDM2BQ8NHM5 1336 aa11.88□□□□□ -0.51
SRSF6-201ENST00000244020 KIF14Q15058 1648 aa11.88□□□□□ -0.51
SRSF6-201ENST00000244020 HSP90AA2PQ14568 343 aaPredicted RBP11.87□□□□□ -0.51
SRSF6-201ENST00000244020 CCDC146Q8IYE0 955 aa11.87□□□□□ -0.51
SRSF6-201ENST00000244020 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
SRSF6-201ENST00000244020 ZBTB7CA1YPR0 619 aa11.87□□□□□ -0.51
SRSF6-201ENST00000244020 GZF1Q9H116 711 aaPredicted RBP11.87□□□□□ -0.51
SRSF6-201ENST00000244020 PER1O15534 1290 aaPredicted RBP11.86□□□□□ -0.51
SRSF6-201ENST00000244020 MBD5Q9P267 1494 aa11.86□□□□□ -0.51
SRSF6-201ENST00000244020 DNMT1P26358 1616 aaKnown RBP11.86□□□□□ -0.51
SRSF6-201ENST00000244020 PLEKHD1A6NEE1 506 aa11.85□□□□□ -0.51
SRSF6-201ENST00000244020 DUSP27Q5VZP5 1158 aa11.85□□□□□ -0.51
SRSF6-201ENST00000244020 PRG4Q92954 1404 aaPredicted RBP11.85□□□□□ -0.51
SRSF6-201ENST00000244020 UHRF1BP1Q6BDS2 1440 aa11.84□□□□□ -0.51
SRSF6-201ENST00000244020 FBLN2P98095 1184 aa11.84□□□□□ -0.51
SRSF6-201ENST00000244020 URB2Q14146 1524 aaKnown RBP11.84□□□□□ -0.51
SRSF6-201ENST00000244020 CAMSAP2Q08AD1 1489 aa11.84□□□□□ -0.51
SRSF6-201ENST00000244020 IQGAP2Q13576 1575 aa11.84□□□□□ -0.51
SRSF6-201ENST00000244020 NCLP19338 710 aaKnown RBP11.84□□□□□ -0.51
SRSF6-201ENST00000244020 GOLGA6L3A6NEY3 463 aa11.83□□□□□ -0.52
SRSF6-201ENST00000244020 BCAR3O75815 825 aa11.83□□□□□ -0.52
SRSF6-201ENST00000244020 LAMC3Q9Y6N6 1575 aa11.83□□□□□ -0.52
SRSF6-201ENST00000244020 PTMAP06454 111 aaKnown RBP11.83□□□□□ -0.52
SRSF6-201ENST00000244020 HNRNPMP52272 730 aaKnown RBP eCLIP11.82□□□□□ -0.52
SRSF6-201ENST00000244020 CCDC144AA2RUR9 1427 aa11.82□□□□□ -0.52
SRSF6-201ENST00000244020 APAF1O14727 1248 aa11.82□□□□□ -0.52
SRSF6-201ENST00000244020 KIF21AQ7Z4S6 1674 aa11.81□□□□□ -0.52
SRSF6-201ENST00000244020 PDS5BQ9NTI5 1447 aa11.81□□□□□ -0.52
SRSF6-201ENST00000244020 PPP2R1AP30153 589 aa11.81□□□□□ -0.52
SRSF6-201ENST00000244020 COG6Q9Y2V7 657 aa11.81□□□□□ -0.52
SRSF6-201ENST00000244020 WDR62O43379 1518 aa11.81□□□□□ -0.52
SRSF6-201ENST00000244020 TPRNQ4KMQ1 711 aa11.81□□□□□ -0.52
SRSF6-201ENST00000244020 MAPK8IP3Q9UPT6 1336 aa11.81□□□□□ -0.52
SRSF6-201ENST00000244020 PLEKHH2Q8IVE3 1493 aa11.81□□□□□ -0.52
SRSF6-201ENST00000244020 NEUROD2Q15784 382 aa11.8□□□□□ -0.52
SRSF6-201ENST00000244020 DISP3Q9P2K9 1392 aa11.79□□□□□ -0.52
SRSF6-201ENST00000244020 IGHDP01880 384 aa11.79□□□□□ -0.52
SRSF6-201ENST00000244020 SLFN5Q08AF3 891 aa11.79□□□□□ -0.52
SRSF6-201ENST00000244020 BLMP54132 1417 aaPredicted RBP11.79□□□□□ -0.52
SRSF6-201ENST00000244020 TROQ12816 1431 aaPredicted RBP11.79□□□□□ -0.52
SRSF6-201ENST00000244020 PLEKHH1Q9ULM0 1364 aa11.79□□□□□ -0.52
SRSF6-201ENST00000244020 RRAGDQ9NQL2 400 aaPredicted RBP11.79□□□□□ -0.52
SRSF6-201ENST00000244020 SEC24BO95487 1268 aa11.79□□□□□ -0.52
SRSF6-201ENST00000244020 CGNL1Q0VF96 1302 aa11.78□□□□□ -0.52
SRSF6-201ENST00000244020 KIAA0586Q9BVV6 1533 aa11.78□□□□□ -0.52
SRSF6-201ENST00000244020 PANK1Q8TE04 598 aa11.78□□□□□ -0.52
SRSF6-201ENST00000244020 CDCA8Q53HL2 280 aa11.77□□□□□ -0.52
SRSF6-201ENST00000244020 CLUAP1Q96AJ1 413 aa11.77□□□□□ -0.52
SRSF6-201ENST00000244020 ARHGEF12Q9NZN5 1544 aa11.77□□□□□ -0.52
SRSF6-201ENST00000244020 E9PSI1 815 aa11.77□□□□□ -0.53
SRSF6-201ENST00000244020 CENPJQ9HC77 1338 aaPredicted RBP11.77□□□□□ -0.53
SRSF6-201ENST00000244020 ZMYM4Q5VZL5 1548 aa11.77□□□□□ -0.53
SRSF6-201ENST00000244020 C9orf84Q5VXU9 1444 aa11.77□□□□□ -0.53
SRSF6-201ENST00000244020 ERBINQ96RT1 1412 aa11.77□□□□□ -0.53
SRSF6-201ENST00000244020 NUP153P49790 1475 aaKnown RBP11.76□□□□□ -0.53
SRSF6-201ENST00000244020 GPATCH8Q9UKJ3 1502 aaKnown RBP11.76□□□□□ -0.53
SRSF6-201ENST00000244020 EIF3AQ14152 1382 aaKnown RBP11.76□□□□□ -0.53
SRSF6-201ENST00000244020 TESK2Q96S53 571 aa11.76□□□□□ -0.53
SRSF6-201ENST00000244020 CHMP7Q8WUX9 453 aaPredicted RBP11.75□□□□□ -0.53
SRSF6-201ENST00000244020 PMFBP1Q8TBY8 1022 aa11.74□□□□□ -0.53
SRSF6-201ENST00000244020 MYH16Q9H6N6 1097 aa11.74□□□□□ -0.53
SRSF6-201ENST00000244020 INSRP06213 1382 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms