RNA–Protein interactions for RNA: ENST00000243056.4

HOXC13-201, Transcript of homeobox C13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC13, Length 2,423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13-201ENST00000243056 TSPOAP1O95153 1857 aa27.31■■□□□ 1.96
HOXC13-201ENST00000243056 SLC4A1APQ9BWU0 796 aaKnown RBP27.3■■□□□ 1.96
HOXC13-201ENST00000243056 DIP2BQ9P265 1576 aa27.3■■□□□ 1.96
HOXC13-201ENST00000243056 DDX10Q13206 875 aaKnown RBP27.29■■□□□ 1.96
HOXC13-201ENST00000243056 DNAJC5Q9H3Z4 198 aa27.26■■□□□ 1.95
HOXC13-201ENST00000243056 NUP155O75694 1391 aa27.25■■□□□ 1.95
HOXC13-201ENST00000243056 MAP3K4Q9Y6R4 1608 aa27.24■■□□□ 1.95
HOXC13-201ENST00000243056 RTL5Q5HYW3 569 aaPredicted RBP27.22■■□□□ 1.95
HOXC13-201ENST00000243056 PKNOX2Q96KN3 472 aa27.2■■□□□ 1.95
HOXC13-201ENST00000243056 MAST1Q9Y2H9 1570 aa27.19■■□□□ 1.94
HOXC13-201ENST00000243056 ZFYVE16Q7Z3T8 1539 aa27.19■■□□□ 1.94
HOXC13-201ENST00000243056 PZPP20742 1482 aa27.19■■□□□ 1.94
HOXC13-201ENST00000243056 CCER2I3L3R5 266 aa27.19■■□□□ 1.94
HOXC13-201ENST00000243056 PKD2Q13563 968 aa27.19■■□□□ 1.94
HOXC13-201ENST00000243056 GLI2P10070 1586 aa27.18■■□□□ 1.94
HOXC13-201ENST00000243056 POGZQ7Z3K3 1410 aa27.16■■□□□ 1.94
HOXC13-201ENST00000243056 TRHP20396 242 aaPredicted RBP27.16■■□□□ 1.94
HOXC13-201ENST00000243056 ATP7AQ04656 1500 aa27.16■■□□□ 1.94
HOXC13-201ENST00000243056 EIF5BO60841 1220 aaKnown RBP27.16■■□□□ 1.94
HOXC13-201ENST00000243056 ZNF518AQ6AHZ1 1483 aa27.15■■□□□ 1.94
HOXC13-201ENST00000243056 PPP1R15AO75807 674 aaPredicted RBP27.15■■□□□ 1.94
HOXC13-201ENST00000243056 NEO1Q92859 1461 aa27.13■■□□□ 1.93
HOXC13-201ENST00000243056 KIF13AQ9H1H9 1805 aa27.13■■□□□ 1.93
HOXC13-201ENST00000243056 KIF3BO15066 747 aa27.12■■□□□ 1.93
HOXC13-201ENST00000243056 PLXNC1O60486 1568 aa27.12■■□□□ 1.93
HOXC13-201ENST00000243056 RTEL1-TNFRSF6BF6WH68 1400 aa27.11■■□□□ 1.93
HOXC13-201ENST00000243056 PPRC1Q5VV67 1664 aaKnown RBP27.1■■□□□ 1.93
HOXC13-201ENST00000243056 PPP4R2Q9NY27 417 aa27.1■■□□□ 1.93
HOXC13-201ENST00000243056 DUOX2Q9NRD8 1548 aa27.1■■□□□ 1.93
HOXC13-201ENST00000243056 KIDINS220Q9ULH0 1771 aa27.09■■□□□ 1.93
HOXC13-201ENST00000243056 INO80Q9ULG1 1556 aaPredicted RBP27.09■■□□□ 1.93
HOXC13-201ENST00000243056 CFAP74Q9C0B2 1584 aa27.07■■□□□ 1.92
HOXC13-201ENST00000243056 COL17A1Q9UMD9 1497 aaPredicted RBP27.06■■□□□ 1.92
HOXC13-201ENST00000243056 YEATS2Q9ULM3 1422 aa27.05■■□□□ 1.92
HOXC13-201ENST00000243056 ANKRD30BQ9BXX2 1392 aa27.05■■□□□ 1.92
HOXC13-201ENST00000243056 WASHC2AQ641Q2 1341 aa27.05■■□□□ 1.92
HOXC13-201ENST00000243056 KDM5CP41229 1560 aa27.02■■□□□ 1.92
HOXC13-201ENST00000243056 ERBINQ96RT1 1412 aa27.02■■□□□ 1.92
HOXC13-201ENST00000243056 DHX29Q7Z478 1369 aaKnown RBP27.02■■□□□ 1.92
HOXC13-201ENST00000243056 GGT6Q6P531 493 aa27.01■■□□□ 1.92
HOXC13-201ENST00000243056 ANP32CO43423 234 aa27.01■■□□□ 1.91
HOXC13-201ENST00000243056 FAM135AQ9P2D6 1515 aa27■■□□□ 1.91
HOXC13-201ENST00000243056 B4GALNT3Q6L9W6 998 aa26.99■■□□□ 1.91
HOXC13-201ENST00000243056 C11orf95C9JLR9 678 aaPredicted RBP26.99■■□□□ 1.91
HOXC13-201ENST00000243056 IPO9Q96P70 1041 aaKnown RBP26.99■■□□□ 1.91
HOXC13-201ENST00000243056 TONSLQ96HA7 1378 aa26.99■■□□□ 1.91
HOXC13-201ENST00000243056 MLH3Q9UHC1 1453 aa26.98■■□□□ 1.91
HOXC13-201ENST00000243056 RICTORQ6R327 1708 aa26.98■■□□□ 1.91
HOXC13-201ENST00000243056 FRMPD1Q5SYB0 1578 aa26.97■■□□□ 1.91
HOXC13-201ENST00000243056 HECW2Q9P2P5 1572 aa26.97■■□□□ 1.91
HOXC13-201ENST00000243056 A2MP01023 1474 aa26.96■■□□□ 1.91
HOXC13-201ENST00000243056 ABCA6Q8N139 1617 aa26.96■■□□□ 1.91
HOXC13-201ENST00000243056 TEX14Q8IWB6 1497 aa26.96■■□□□ 1.91
HOXC13-201ENST00000243056 L3MBTL2Q969R5 705 aa26.93■■□□□ 1.9
HOXC13-201ENST00000243056 HNRNPUQ00839 825 aaKnown RBP eCLIP26.92■■□□□ 1.9
HOXC13-201ENST00000243056 UNC13BO14795 1591 aa26.92■■□□□ 1.9
HOXC13-201ENST00000243056 KDM5DQ9BY66 1539 aa26.91■■□□□ 1.9
HOXC13-201ENST00000243056 WASHC2CQ9Y4E1 1318 aa26.91■■□□□ 1.9
HOXC13-201ENST00000243056 ZBTB47Q9UFB7 747 aaPredicted RBP26.91■■□□□ 1.9
HOXC13-201ENST00000243056 ANP32AP39687 249 aaKnown RBP26.89■■□□□ 1.9
HOXC13-201ENST00000243056 BRPF3Q9ULD4 1205 aa26.88■■□□□ 1.89
HOXC13-201ENST00000243056 DIP2CQ9Y2E4 1556 aa26.87■■□□□ 1.89
HOXC13-201ENST00000243056 HIRIP3Q9BW71 556 aaPredicted RBP26.86■■□□□ 1.89
HOXC13-201ENST00000243056 MAGI2Q86UL8 1455 aa26.85■■□□□ 1.89
HOXC13-201ENST00000243056 RPRD2Q5VT52 1461 aaKnown RBP26.84■■□□□ 1.89
HOXC13-201ENST00000243056 MLECQ14165 292 aa26.84■■□□□ 1.89
HOXC13-201ENST00000243056 PLA2R1Q13018 1463 aa26.84■■□□□ 1.89
HOXC13-201ENST00000243056 IQGAP3Q86VI3 1631 aa26.83■■□□□ 1.89
HOXC13-201ENST00000243056 RGL3Q3MIN7 710 aa26.82■■□□□ 1.88
HOXC13-201ENST00000243056 MROH1Q8NDA8 1641 aa26.82■■□□□ 1.88
HOXC13-201ENST00000243056 ZNF326Q5BKZ1 582 aaKnown RBP26.8■■□□□ 1.88
HOXC13-201ENST00000243056 KANK1Q14678 1352 aa26.79■■□□□ 1.88
HOXC13-201ENST00000243056 TIMELESSQ9UNS1 1208 aa26.79■■□□□ 1.88
HOXC13-201ENST00000243056 KDM2AQ9Y2K7 1162 aa26.78■■□□□ 1.88
HOXC13-201ENST00000243056 DEPDC5O75140 1603 aa26.77■■□□□ 1.88
HOXC13-201ENST00000243056 NBPF8Q3BBV2 869 aa26.77■■□□□ 1.88
HOXC13-201ENST00000243056 NEFMP07197 916 aa26.76■■□□□ 1.87
HOXC13-201ENST00000243056 PLEKHG5O94827 1062 aa26.75■■□□□ 1.87
HOXC13-201ENST00000243056 ZMYM4Q5VZL5 1548 aa26.74■■□□□ 1.87
HOXC13-201ENST00000243056 E9PCH4 1651 aa26.73■■□□□ 1.87
HOXC13-201ENST00000243056 EIF2AK4Q9P2K8 1649 aaKnown RBP26.73■■□□□ 1.87
HOXC13-201ENST00000243056 CFAP65Q6ZU64 1925 aaKnown RBP26.73■■□□□ 1.87
HOXC13-201ENST00000243056 PRDM15P57071 1507 aaPredicted RBP26.73■■□□□ 1.87
HOXC13-201ENST00000243056 CCDC144AA2RUR9 1427 aa26.72■■□□□ 1.87
HOXC13-201ENST00000243056 ATP10AO60312 1499 aa26.72■■□□□ 1.87
HOXC13-201ENST00000243056 SIGLEC1Q9BZZ2 1709 aa26.72■■□□□ 1.87
HOXC13-201ENST00000243056 LAS1LQ9Y4W2 734 aaKnown RBP26.71■■□□□ 1.87
HOXC13-201ENST00000243056 VWDEQ8N2E2 1590 aa26.7■■□□□ 1.87
HOXC13-201ENST00000243056 DCAF11Q8TEB1 546 aa26.7■■□□□ 1.86
HOXC13-201ENST00000243056 USP35Q9P2H5 1018 aa26.7■■□□□ 1.86
HOXC13-201ENST00000243056 CEP152O94986 1710 aa26.7■■□□□ 1.86
HOXC13-201ENST00000243056 ARID4BQ4LE39 1312 aaPredicted RBP26.67■■□□□ 1.86
HOXC13-201ENST00000243056 UGGT1Q9NYU2 1555 aa26.67■■□□□ 1.86
HOXC13-201ENST00000243056 RNF17Q9BXT8 1623 aaKnown RBP26.65■■□□□ 1.86
HOXC13-201ENST00000243056 RSPH6AQ9H0K4 717 aa26.65■■□□□ 1.86
HOXC13-201ENST00000243056 NPATQ14207 1427 aa26.63■■□□□ 1.85
HOXC13-201ENST00000243056 TET3O43151 1660 aa26.63■■□□□ 1.85
HOXC13-201ENST00000243056 FBXO31Q5XUX0 539 aaPredicted RBP26.61■■□□□ 1.85
HOXC13-201ENST00000243056 ABCC3O15438 1527 aa26.61■■□□□ 1.85
HOXC13-201ENST00000243056 EFCAB6Q5THR3 1501 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms