RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 VPS37DQ86XT2 251 aa16.4■□□□□ 0.22
NEK9-201ENST00000238616 PTMSP20962 102 aa16.39■□□□□ 0.21
NEK9-201ENST00000238616 MCTP1Q6DN14 999 aa16.39■□□□□ 0.21
NEK9-201ENST00000238616 RILPL2Q969X0 211 aa16.39■□□□□ 0.21
NEK9-201ENST00000238616 NOL10Q9BSC4 688 aaKnown RBP16.38■□□□□ 0.21
NEK9-201ENST00000238616 PRDM2Q13029 1718 aa16.38■□□□□ 0.21
NEK9-201ENST00000238616 FOXD1Q16676 465 aa16.38■□□□□ 0.21
NEK9-201ENST00000238616 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
NEK9-201ENST00000238616 DHX16O60231 1041 aaKnown RBP16.37■□□□□ 0.21
NEK9-201ENST00000238616 PHF14O94880 888 aa16.37■□□□□ 0.21
NEK9-201ENST00000238616 CCNB3Q8WWL7 1395 aa16.37■□□□□ 0.21
NEK9-201ENST00000238616 FAM184AQ8NB25 1140 aa16.36■□□□□ 0.21
NEK9-201ENST00000238616 CCDC43Q96MW1 224 aaKnown RBP16.36■□□□□ 0.21
NEK9-201ENST00000238616 AMOTL1Q8IY63 956 aa16.36■□□□□ 0.21
NEK9-201ENST00000238616 CCDC146Q8IYE0 955 aa16.36■□□□□ 0.21
NEK9-201ENST00000238616 APPP05067 770 aa16.35■□□□□ 0.21
NEK9-201ENST00000238616 GOLGA6L19H0YKK7 550 aa16.35■□□□□ 0.21
NEK9-201ENST00000238616 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
NEK9-201ENST00000238616 RWDD1Q9H446 243 aaPredicted RBP16.34■□□□□ 0.21
NEK9-201ENST00000238616 RRP12Q5JTH9 1297 aaKnown RBP16.34■□□□□ 0.21
NEK9-201ENST00000238616 CLUAP1Q96AJ1 413 aa16.33■□□□□ 0.2
NEK9-201ENST00000238616 CCDC70Q6NSX1 233 aa16.33■□□□□ 0.2
NEK9-201ENST00000238616 EID1Q9Y6B2 187 aa16.33■□□□□ 0.2
NEK9-201ENST00000238616 ODF2Q5BJF6 829 aa16.33■□□□□ 0.2
NEK9-201ENST00000238616 ZNF592Q92610 1267 aa16.33■□□□□ 0.2
NEK9-201ENST00000238616 TPM1P09493 284 aa16.32■□□□□ 0.2
NEK9-201ENST00000238616 GOLGA3Q08378 1498 aa16.32■□□□□ 0.2
NEK9-201ENST00000238616 HMMRO75330 724 aa16.32■□□□□ 0.2
NEK9-201ENST00000238616 BCL11BQ9C0K0 894 aaPredicted RBP16.32■□□□□ 0.2
NEK9-201ENST00000238616 DCAF8L1A6NGE4 600 aa16.3■□□□□ 0.2
NEK9-201ENST00000238616 ZFYVE27Q5T4F4 411 aa16.3■□□□□ 0.2
NEK9-201ENST00000238616 GOLGA6L3A6NEY3 463 aa16.3■□□□□ 0.2
NEK9-201ENST00000238616 SYNE3Q6ZMZ3 975 aa16.29■□□□□ 0.2
NEK9-201ENST00000238616 ST18O60284 1047 aa16.29■□□□□ 0.2
NEK9-201ENST00000238616 NAP1L1P55209 391 aaKnown RBP16.29■□□□□ 0.2
NEK9-201ENST00000238616 PAF1Q8N7H5 531 aa16.29■□□□□ 0.2
NEK9-201ENST00000238616 CT47A1Q5JQC4 288 aaPredicted RBP16.29■□□□□ 0.2
NEK9-201ENST00000238616 C1orf141Q5JVX7 400 aa16.29■□□□□ 0.2
NEK9-201ENST00000238616 NECTIN2Q92692 538 aa16.29■□□□□ 0.2
NEK9-201ENST00000238616 PPP1R1BQ9UD71 204 aaPredicted RBP16.28■□□□□ 0.2
NEK9-201ENST00000238616 CALRP27797 417 aaKnown RBP16.28■□□□□ 0.2
NEK9-201ENST00000238616 RCAN3Q9UKA8 241 aa16.28■□□□□ 0.2
NEK9-201ENST00000238616 KIF3AQ9Y496 699 aa16.28■□□□□ 0.2
NEK9-201ENST00000238616 CEP162Q5TB80 1403 aa16.28■□□□□ 0.2
NEK9-201ENST00000238616 FOSBP53539 338 aa16.28■□□□□ 0.2
NEK9-201ENST00000238616 PMFBP1Q8TBY8 1022 aa16.27■□□□□ 0.2
NEK9-201ENST00000238616 FYB1O15117 783 aa16.26■□□□□ 0.19
NEK9-201ENST00000238616 BECN2A8MW95 431 aa16.26■□□□□ 0.19
NEK9-201ENST00000238616 TRIM29Q14134 588 aa16.25■□□□□ 0.19
NEK9-201ENST00000238616 HDAC5Q9UQL6 1122 aa16.25■□□□□ 0.19
NEK9-201ENST00000238616 EPS15P42566 896 aa16.25■□□□□ 0.19
NEK9-201ENST00000238616 MTMR7Q9Y216 660 aa16.25■□□□□ 0.19
NEK9-201ENST00000238616 RB1CC1Q8TDY2 1594 aa16.24■□□□□ 0.19
NEK9-201ENST00000238616 TMEM132AQ24JP5 1023 aa16.23■□□□□ 0.19
NEK9-201ENST00000238616 CHMP4AQ9BY43 222 aa16.23■□□□□ 0.19
NEK9-201ENST00000238616 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.23■□□□□ 0.19
NEK9-201ENST00000238616 R3HCC1Q9Y3T6 440 aaKnown RBP16.23■□□□□ 0.19
NEK9-201ENST00000238616 BAZ1BQ9UIG0 1483 aaKnown RBP16.23■□□□□ 0.19
NEK9-201ENST00000238616 SLC4A3P48751 1232 aa16.23■□□□□ 0.19
NEK9-201ENST00000238616 CCAR1Q8IX12 1150 aaKnown RBP16.23■□□□□ 0.19
NEK9-201ENST00000238616 VSIG10Q8N0Z9 540 aa16.22■□□□□ 0.19
NEK9-201ENST00000238616 EIF2S2P20042 333 aaKnown RBP16.22■□□□□ 0.19
NEK9-201ENST00000238616 NFXL1Q6ZNB6 911 aa16.22■□□□□ 0.19
NEK9-201ENST00000238616 IPO7O95373 1038 aaKnown RBP16.21■□□□□ 0.19
NEK9-201ENST00000238616 C9orf78Q9NZ63 289 aaPredicted RBP16.21■□□□□ 0.19
NEK9-201ENST00000238616 RRP7AQ9Y3A4 280 aaKnown RBP16.21■□□□□ 0.19
NEK9-201ENST00000238616 TCERG1O14776 1098 aaKnown RBP16.21■□□□□ 0.19
NEK9-201ENST00000238616 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.18
NEK9-201ENST00000238616 IKQ13123 557 aaPredicted RBP16.2■□□□□ 0.18
NEK9-201ENST00000238616 HSP90AB2PQ58FF8 381 aa16.2■□□□□ 0.18
NEK9-201ENST00000238616 ELL2O00472 640 aaPredicted RBP16.2■□□□□ 0.18
NEK9-201ENST00000238616 ANKRD45Q5TZF3 282 aa16.2■□□□□ 0.18
NEK9-201ENST00000238616 KIF27Q86VH2 1401 aa16.2■□□□□ 0.18
NEK9-201ENST00000238616 EIF3AQ14152 1382 aaKnown RBP16.2■□□□□ 0.18
NEK9-201ENST00000238616 SKIDA1Q1XH10 827 aa16.2■□□□□ 0.18
NEK9-201ENST00000238616 KDM4AO75164 1064 aa16.19■□□□□ 0.18
NEK9-201ENST00000238616 TTC5Q8N0Z6 440 aa16.19■□□□□ 0.18
NEK9-201ENST00000238616 GPS2Q13227 327 aa16.19■□□□□ 0.18
NEK9-201ENST00000238616 ZNF771Q7L3S4 317 aaPredicted RBP16.19■□□□□ 0.18
NEK9-201ENST00000238616 RBM33Q96EV2 1170 aaKnown RBP16.18■□□□□ 0.18
NEK9-201ENST00000238616 HOMER1Q86YM7 354 aa16.18■□□□□ 0.18
NEK9-201ENST00000238616 CCDC27Q2M243 656 aa16.17■□□□□ 0.18
NEK9-201ENST00000238616 ERICH2A1L162 156 aa16.17■□□□□ 0.18
NEK9-201ENST00000238616 ANKRD20A12PQ8NF67 263 aa16.17■□□□□ 0.18
NEK9-201ENST00000238616 PKD2Q13563 968 aa16.17■□□□□ 0.18
NEK9-201ENST00000238616 RUFY1Q96T51 708 aa16.16■□□□□ 0.18
NEK9-201ENST00000238616 BCL2L13Q9BXK5 485 aa16.16■□□□□ 0.18
NEK9-201ENST00000238616 RBM19Q9Y4C8 960 aaKnown RBP16.16■□□□□ 0.18
NEK9-201ENST00000238616 CCDC47Q96A33 483 aaKnown RBP16.15■□□□□ 0.18
NEK9-201ENST00000238616 WWC2Q6AWC2 1192 aa16.15■□□□□ 0.18
NEK9-201ENST00000238616 DIAPH3Q9NSV4 1193 aa16.15■□□□□ 0.18
NEK9-201ENST00000238616 NEXNQ0ZGT2 675 aa16.15■□□□□ 0.18
NEK9-201ENST00000238616 LRRFIP1Q32MZ4 808 aaKnown RBP16.15■□□□□ 0.18
NEK9-201ENST00000238616 CPLX1O14810 134 aa16.15■□□□□ 0.18
NEK9-201ENST00000238616 PLIN1O60240 522 aa16.14■□□□□ 0.17
NEK9-201ENST00000238616 HOOK1Q9UJC3 728 aaKnown RBP16.14■□□□□ 0.17
NEK9-201ENST00000238616 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
NEK9-201ENST00000238616 TRDNQ13061 729 aa16.14■□□□□ 0.17
NEK9-201ENST00000238616 MAP7D2Q96T17 732 aa16.14■□□□□ 0.17
NEK9-201ENST00000238616 HSPA5P11021 654 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms