RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 ROCK2O75116 1388 aaKnown RBP9.21□□□□□ -0.93
MED28-201ENST00000237380 RWDD1Q9H446 243 aaPredicted RBP9.21□□□□□ -0.93
MED28-201ENST00000237380 VPS8Q8N3P4 1428 aa9.21□□□□□ -0.94
MED28-201ENST00000237380 ATF3P18847 181 aa9.21□□□□□ -0.94
MED28-201ENST00000237380 OSCARQ8IYS5 282 aa9.21□□□□□ -0.94
MED28-201ENST00000237380 DDX58O95786 925 aaKnown RBP9.2□□□□□ -0.94
MED28-201ENST00000237380 SOGA1O94964 1423 aa9.2□□□□□ -0.94
MED28-201ENST00000237380 ROCK1Q13464 1354 aa9.2□□□□□ -0.94
MED28-201ENST00000237380 VPS37DQ86XT2 251 aa9.2□□□□□ -0.94
MED28-201ENST00000237380 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
MED28-201ENST00000237380 VGFO15240 615 aaPredicted RBP9.19□□□□□ -0.94
MED28-201ENST00000237380 DNAI2Q9GZS0 605 aa9.19□□□□□ -0.94
MED28-201ENST00000237380 TAOK2Q9UL54 1235 aa9.19□□□□□ -0.94
MED28-201ENST00000237380 ANKRD20A12PQ8NF67 263 aa9.19□□□□□ -0.94
MED28-201ENST00000237380 ATP6V1DQ9Y5K8 247 aa9.19□□□□□ -0.94
MED28-201ENST00000237380 CECR2Q9BXF3 1484 aa9.19□□□□□ -0.94
MED28-201ENST00000237380 CCAR1Q8IX12 1150 aaKnown RBP9.19□□□□□ -0.94
MED28-201ENST00000237380 SENP3Q9H4L4 574 aaPredicted RBP9.18□□□□□ -0.94
MED28-201ENST00000237380 RBM33Q96EV2 1170 aaKnown RBP9.18□□□□□ -0.94
MED28-201ENST00000237380 SOX12O15370 315 aa9.18□□□□□ -0.94
MED28-201ENST00000237380 KIF16BQ96L93 1317 aa9.18□□□□□ -0.94
MED28-201ENST00000237380 STK26Q9P289 416 aa9.18□□□□□ -0.94
MED28-201ENST00000237380 TRIM21P19474 475 aaKnown RBP9.18□□□□□ -0.94
MED28-201ENST00000237380 TPD52L1Q16890 204 aaPredicted RBP9.18□□□□□ -0.94
MED28-201ENST00000237380 TCERG1O14776 1098 aaKnown RBP9.17□□□□□ -0.94
MED28-201ENST00000237380 PSME1Q06323 249 aa9.17□□□□□ -0.94
MED28-201ENST00000237380 ERICH2A1L162 156 aa9.17□□□□□ -0.94
MED28-201ENST00000237380 CCER2I3L3R5 266 aa9.16□□□□□ -0.94
MED28-201ENST00000237380 TRIM29Q14134 588 aa9.16□□□□□ -0.94
MED28-201ENST00000237380 TOP2AP11388 1531 aaKnown RBP9.16□□□□□ -0.94
MED28-201ENST00000237380 CC2D1BQ5T0F9 858 aaKnown RBP9.16□□□□□ -0.94
MED28-201ENST00000237380 NGEFQ8N5V2 710 aa9.16□□□□□ -0.94
MED28-201ENST00000237380 PRDM2Q13029 1718 aa9.16□□□□□ -0.94
MED28-201ENST00000237380 RUFY2Q8WXA3 655 aa9.15□□□□□ -0.94
MED28-201ENST00000237380 EVC2Q86UK5 1308 aa9.15□□□□□ -0.94
MED28-201ENST00000237380 MIA2Q96PC5 1412 aa9.15□□□□□ -0.94
MED28-201ENST00000237380 TEFQ10587 303 aa9.15□□□□□ -0.95
MED28-201ENST00000237380 ST18O60284 1047 aa9.14□□□□□ -0.95
MED28-201ENST00000237380 IPO7O95373 1038 aaKnown RBP9.14□□□□□ -0.95
MED28-201ENST00000237380 NBR1Q14596 966 aa9.14□□□□□ -0.95
MED28-201ENST00000237380 COG3Q96JB2 828 aa9.14□□□□□ -0.95
MED28-201ENST00000237380 U2AF1L5P0DN76 240 aaPredicted RBP9.14□□□□□ -0.95
MED28-201ENST00000237380 U2AF1Q01081 240 aaKnown RBP eCLIP9.14□□□□□ -0.95
MED28-201ENST00000237380 SF3A1Q15459 793 aaKnown RBP9.14□□□□□ -0.95
MED28-201ENST00000237380 SMG6Q86US8 1419 aaKnown RBP9.14□□□□□ -0.95
MED28-201ENST00000237380 TRDNQ13061 729 aa9.14□□□□□ -0.95
MED28-201ENST00000237380 PPP4R2Q9NY27 417 aa9.14□□□□□ -0.95
MED28-201ENST00000237380 KIF3BO15066 747 aa9.13□□□□□ -0.95
MED28-201ENST00000237380 POGZQ7Z3K3 1410 aa9.13□□□□□ -0.95
MED28-201ENST00000237380 ODF2Q5BJF6 829 aa9.13□□□□□ -0.95
MED28-201ENST00000237380 SETQ01105 290 aaPredicted RBP9.13□□□□□ -0.95
MED28-201ENST00000237380 TRIM6-TRIM34B2RNG4 842 aa9.13□□□□□ -0.95
MED28-201ENST00000237380 MFAP1P55081 439 aaKnown RBP9.13□□□□□ -0.95
MED28-201ENST00000237380 SLC3A2P08195 630 aaKnown RBP9.13□□□□□ -0.95
MED28-201ENST00000237380 GPS2Q13227 327 aa9.12□□□□□ -0.95
MED28-201ENST00000237380 XBP1P17861 261 aa9.12□□□□□ -0.95
MED28-201ENST00000237380 BRMS1Q9HCU9 246 aa9.12□□□□□ -0.95
MED28-201ENST00000237380 CDR1P51861 262 aa9.12□□□□□ -0.95
MED28-201ENST00000237380 TOMM22Q9NS69 142 aa9.12□□□□□ -0.95
MED28-201ENST00000237380 MYO6Q9UM54 1294 aa9.12□□□□□ -0.95
MED28-201ENST00000237380 NUP155O75694 1391 aa9.12□□□□□ -0.95
MED28-201ENST00000237380 H3BQV1 296 aa9.11□□□□□ -0.95
MED28-201ENST00000237380 IFFO2Q5TF58 517 aa9.11□□□□□ -0.95
MED28-201ENST00000237380 FAM184AQ8NB25 1140 aa9.11□□□□□ -0.95
MED28-201ENST00000237380 CGNL1Q0VF96 1302 aa9.11□□□□□ -0.95
MED28-201ENST00000237380 RNF20Q5VTR2 975 aa9.11□□□□□ -0.95
MED28-201ENST00000237380 SCAPERQ9BY12 1400 aa9.11□□□□□ -0.95
MED28-201ENST00000237380 DESP17661 470 aa9.11□□□□□ -0.95
MED28-201ENST00000237380 HSP90AB4PQ58FF6 505 aa9.11□□□□□ -0.95
MED28-201ENST00000237380 SUPT16HQ9Y5B9 1047 aaKnown RBP9.11□□□□□ -0.95
MED28-201ENST00000237380 ITPRIPQ8IWB1 547 aa9.1□□□□□ -0.95
MED28-201ENST00000237380 TPRNQ4KMQ1 711 aa9.1□□□□□ -0.95
MED28-201ENST00000237380 MIER1Q8N108 512 aa9.09□□□□□ -0.95
MED28-201ENST00000237380 SAFB2Q14151 953 aaKnown RBP eCLIP9.09□□□□□ -0.95
MED28-201ENST00000237380 GPRASP1Q5JY77 1395 aa9.09□□□□□ -0.95
MED28-201ENST00000237380 CCDC144AA2RUR9 1427 aa9.09□□□□□ -0.95
MED28-201ENST00000237380 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.09□□□□□ -0.961e-11■■■■■ 41.4
MED28-201ENST00000237380 RAPGEF4Q8WZA2 1011 aa9.08□□□□□ -0.96
MED28-201ENST00000237380 CCDC173Q0VFZ6 552 aa9.07□□□□□ -0.96
MED28-201ENST00000237380 SAFBQ15424 915 aaKnown RBP eCLIP9.07□□□□□ -0.96
MED28-201ENST00000237380 PDE3BQ13370 1112 aa9.07□□□□□ -0.96
MED28-201ENST00000237380 C9orf78Q9NZ63 289 aaPredicted RBP9.07□□□□□ -0.96
MED28-201ENST00000237380 GOLGA6L19H0YKK7 550 aa9.07□□□□□ -0.96
MED28-201ENST00000237380 RGS3P49796 1198 aa9.07□□□□□ -0.96
MED28-201ENST00000237380 PKD2Q13563 968 aa9.07□□□□□ -0.96
MED28-201ENST00000237380 ZRSR2Q15696 482 aaKnown RBP9.07□□□□□ -0.96
MED28-201ENST00000237380 ZKSCAN1P17029 563 aaPredicted RBP9.07□□□□□ -0.96
MED28-201ENST00000237380 KIF6Q6ZMV9 814 aa9.07□□□□□ -0.96
MED28-201ENST00000237380 CT47A1Q5JQC4 288 aaPredicted RBP9.06□□□□□ -0.96
MED28-201ENST00000237380 CUX1P39880 1505 aa9.06□□□□□ -0.96
MED28-201ENST00000237380 RAPGEF2Q9Y4G8 1499 aa9.06□□□□□ -0.96
MED28-201ENST00000237380 GNL3LQ9NVN8 582 aaKnown RBP9.06□□□□□ -0.96
MED28-201ENST00000237380 EPS15P42566 896 aa9.05□□□□□ -0.96
MED28-201ENST00000237380 DHX16O60231 1041 aaKnown RBP9.05□□□□□ -0.96
MED28-201ENST00000237380 PES1O00541 588 aaKnown RBP9.05□□□□□ -0.96
MED28-201ENST00000237380 SART3Q15020 963 aaKnown RBP9.05□□□□□ -0.96
MED28-201ENST00000237380 KLHL34Q8N239 644 aa9.05□□□□□ -0.96
MED28-201ENST00000237380 TXLNBQ8N3L3 684 aa9.04□□□□□ -0.96
MED28-201ENST00000237380 FBXW7Q969H0 707 aa9.04□□□□□ -0.96
MED28-201ENST00000237380 DHX57Q6P158 1386 aaKnown RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms