RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 E9PSI1 815 aa10.13□□□□□ -0.79
APOB-201ENST00000233242 ACBD3Q9H3P7 528 aa10.13□□□□□ -0.79
APOB-201ENST00000233242 HDGFL2Q7Z4V5 671 aaPredicted RBP10.12□□□□□ -0.79
APOB-201ENST00000233242 BECN2A8MW95 431 aa10.12□□□□□ -0.79
APOB-201ENST00000233242 TPM1P09493 284 aa10.12□□□□□ -0.79
APOB-201ENST00000233242 SOGA1O94964 1423 aa10.12□□□□□ -0.79
APOB-201ENST00000233242 NFKBIBQ15653 356 aa10.12□□□□□ -0.79
APOB-201ENST00000233242 PRKRIP1Q9H875 184 aaPredicted RBP10.12□□□□□ -0.79
APOB-201ENST00000233242 STK31Q9BXU1 1019 aa10.12□□□□□ -0.79
APOB-201ENST00000233242 DHX57Q6P158 1386 aaKnown RBP10.11□□□□□ -0.79
APOB-201ENST00000233242 TSR1Q2NL82 804 aaKnown RBP10.11□□□□□ -0.79
APOB-201ENST00000233242 TAF3Q5VWG9 929 aa10.1□□□□□ -0.79
APOB-201ENST00000233242 ANKRD30AQ9BXX3 1397 aa10.1□□□□□ -0.79
APOB-201ENST00000233242 TRIM6-TRIM34B2RNG4 842 aa10.09□□□□□ -0.79
APOB-201ENST00000233242 HDGFP51858 240 aaKnown RBP10.09□□□□□ -0.79
APOB-201ENST00000233242 NASPP49321 788 aaPredicted RBP10.09□□□□□ -0.79
APOB-201ENST00000233242 ZKSCAN2Q63HK3 967 aa10.09□□□□□ -0.79
APOB-201ENST00000233242 SPAG9O60271 1321 aaKnown RBP10.09□□□□□ -0.79
APOB-201ENST00000233242 EXOC6Q8TAG9 804 aa10.08□□□□□ -0.8
APOB-201ENST00000233242 HSP90B1P14625 803 aaKnown RBP10.08□□□□□ -0.8
APOB-201ENST00000233242 APBB1O00213 710 aa10.08□□□□□ -0.8
APOB-201ENST00000233242 KANK4Q5T7N3 995 aaPredicted RBP10.08□□□□□ -0.8
APOB-201ENST00000233242 KCNH8Q96L42 1107 aa10.08□□□□□ -0.8
APOB-201ENST00000233242 SRPK2P78362 688 aaKnown RBP10.08□□□□□ -0.8
APOB-201ENST00000233242 SF3A1Q15459 793 aaKnown RBP10.07□□□□□ -0.8
APOB-201ENST00000233242 L3MBTL2Q969R5 705 aa10.07□□□□□ -0.8
APOB-201ENST00000233242 TAOK2Q9UL54 1235 aa10.07□□□□□ -0.8
APOB-201ENST00000233242 DHX8Q14562 1220 aaKnown RBP10.07□□□□□ -0.8
APOB-201ENST00000233242 CCDC173Q0VFZ6 552 aa10.06□□□□□ -0.8
APOB-201ENST00000233242 DDX19BQ9UMR2 479 aa10.06□□□□□ -0.8
APOB-201ENST00000233242 IPO7O95373 1038 aaKnown RBP10.06□□□□□ -0.8
APOB-201ENST00000233242 HSP90B2PQ58FF3 399 aa10.06□□□□□ -0.8
APOB-201ENST00000233242 H3BQV1 296 aa10.06□□□□□ -0.8
APOB-201ENST00000233242 IFFO2Q5TF58 517 aa10.06□□□□□ -0.8
APOB-201ENST00000233242 TERF2IPQ9NYB0 399 aa10.06□□□□□ -0.8
APOB-201ENST00000233242 FOXD4L1Q9NU39 408 aa10.06□□□□□ -0.8
APOB-201ENST00000233242 CDR1P51861 262 aa10.05□□□□□ -0.8
APOB-201ENST00000233242 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
APOB-201ENST00000233242 LETM1O95202 739 aaPredicted RBP10.05□□□□□ -0.8
APOB-201ENST00000233242 A0A0G2JS52 829 aa10.05□□□□□ -0.8
APOB-201ENST00000233242 MBD3O95983 291 aa10.05□□□□□ -0.8
APOB-201ENST00000233242 CCAR2Q8N163 923 aaKnown RBP10.05□□□□□ -0.8
APOB-201ENST00000233242 CRBNQ96SW2 442 aa10.05□□□□□ -0.8
APOB-201ENST00000233242 NUP155O75694 1391 aa10.05□□□□□ -0.8
APOB-201ENST00000233242 TULP1O00294 542 aaPredicted RBP10.05□□□□□ -0.8
APOB-201ENST00000233242 AK7Q96M32 723 aa10.05□□□□□ -0.8
APOB-201ENST00000233242 CCP110O43303 1012 aa10.04□□□□□ -0.8
APOB-201ENST00000233242 RUFY2Q8WXA3 655 aa10.04□□□□□ -0.8
APOB-201ENST00000233242 CLUAP1Q96AJ1 413 aa10.04□□□□□ -0.8
APOB-201ENST00000233242 PRKCSHP14314 528 aaPredicted RBP10.04□□□□□ -0.8
APOB-201ENST00000233242 ANKRD20A12PQ8NF67 263 aa10.04□□□□□ -0.8
APOB-201ENST00000233242 HOOK1Q9UJC3 728 aaKnown RBP10.04□□□□□ -0.8
APOB-201ENST00000233242 ZNF592Q92610 1267 aa10.03□□□□□ -0.8
APOB-201ENST00000233242 HOMER1Q86YM7 354 aa10.03□□□□□ -0.8
APOB-201ENST00000233242 CUX2O14529 1486 aa10.03□□□□□ -0.8
APOB-201ENST00000233242 ROCK1Q13464 1354 aa10.03□□□□□ -0.8
APOB-201ENST00000233242 MNS1Q8NEH6 495 aa10.03□□□□□ -0.8
APOB-201ENST00000233242 C22orf23Q9BZE7 217 aa10.02□□□□□ -0.8
APOB-201ENST00000233242 ERCC4Q92889 916 aaPredicted RBP10.02□□□□□ -0.81
APOB-201ENST00000233242 IFT57Q9NWB7 429 aa10.02□□□□□ -0.81
APOB-201ENST00000233242 CEP89Q96ST8 783 aa10.02□□□□□ -0.81
APOB-201ENST00000233242 ZKSCAN1P17029 563 aaPredicted RBP10.02□□□□□ -0.81
APOB-201ENST00000233242 RSPH4AQ5TD94 716 aa10.02□□□□□ -0.81
APOB-201ENST00000233242 BRPF3Q9ULD4 1205 aa10.02□□□□□ -0.81
APOB-201ENST00000233242 FAM184AQ8NB25 1140 aa10.01□□□□□ -0.81
APOB-201ENST00000233242 ANKRD45Q5TZF3 282 aa10.01□□□□□ -0.81
APOB-201ENST00000233242 NAT10Q9H0A0 1025 aaKnown RBP10.01□□□□□ -0.81
APOB-201ENST00000233242 CAVIN1Q6NZI2 390 aaKnown RBP10.01□□□□□ -0.81
APOB-201ENST00000233242 USP47Q96K76 1375 aa10.01□□□□□ -0.81
APOB-201ENST00000233242 LRRFIP1Q32MZ4 808 aaKnown RBP10.01□□□□□ -0.81
APOB-201ENST00000233242 RASSF8Q8NHQ8 419 aa10.01□□□□□ -0.81
APOB-201ENST00000233242 R3HCC1Q9Y3T6 440 aaKnown RBP10.01□□□□□ -0.81
APOB-201ENST00000233242 TPD52L1Q16890 204 aaPredicted RBP10.01□□□□□ -0.81
APOB-201ENST00000233242 INTS3Q68E01 1043 aaKnown RBP10□□□□□ -0.81
APOB-201ENST00000233242 DCTN1Q14203 1278 aa10□□□□□ -0.81
APOB-201ENST00000233242 CLSTN1O94985 981 aa10□□□□□ -0.81
APOB-201ENST00000233242 TRAK2O60296 914 aa10□□□□□ -0.81
APOB-201ENST00000233242 FOXD4L5Q5VV16 416 aaPredicted RBP10□□□□□ -0.81
APOB-201ENST00000233242 FOXD4L4Q8WXT5 416 aaPredicted RBP10□□□□□ -0.81
APOB-201ENST00000233242 NOL8Q76FK4 1167 aaKnown RBP10□□□□□ -0.81
APOB-201ENST00000233242 APPP05067 770 aa9.99□□□□□ -0.81
APOB-201ENST00000233242 NPHP1O15259 732 aa9.99□□□□□ -0.81
APOB-201ENST00000233242 DZIP1LQ8IYY4 767 aaKnown RBP9.99□□□□□ -0.81
APOB-201ENST00000233242 FOXD1Q16676 465 aa9.99□□□□□ -0.81
APOB-201ENST00000233242 CPLX2Q6PUV4 134 aaKnown RBP9.99□□□□□ -0.81
APOB-201ENST00000233242 CCDC146Q8IYE0 955 aa9.99□□□□□ -0.81
APOB-201ENST00000233242 RUFY1Q96T51 708 aa9.99□□□□□ -0.81
APOB-201ENST00000233242 BRD4O60885 1362 aaPredicted RBP9.99□□□□□ -0.81
APOB-201ENST00000233242 ANO8Q9HCE9 1232 aaPredicted RBP9.99□□□□□ -0.81
APOB-201ENST00000233242 GORABQ5T7V8 394 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 RNF20Q5VTR2 975 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 PODXL2Q9NZ53 605 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 PLIN1O60240 522 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 MCM2P49736 904 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 SASS6Q6UVJ0 657 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 CCDC18Q5T9S5 1454 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 TSPYL1Q9H0U9 437 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 CNTLNQ9NXG0 1405 aa9.98□□□□□ -0.81
APOB-201ENST00000233242 RDXP35241 583 aaKnown RBP9.98□□□□□ -0.81
APOB-201ENST00000233242 API5Q9BZZ5 524 aaKnown RBP9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms