RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 TDRD9Q8NDG6 1382 aaKnown RBP21.85■■□□□ 1.09
RAB35-201ENST00000229340 THOC2Q8NI27 1593 aaKnown RBP21.85■■□□□ 1.09
RAB35-201ENST00000229340 GLIPR1L2Q4G1C9 344 aa21.84■■□□□ 1.09
RAB35-201ENST00000229340 KIF14Q15058 1648 aa21.84■■□□□ 1.09
RAB35-201ENST00000229340 SEC24BO95487 1268 aa21.82■■□□□ 1.08
RAB35-201ENST00000229340 ROCK1Q13464 1354 aa21.81■■□□□ 1.08
RAB35-201ENST00000229340 PARD3Q8TEW0 1356 aa21.81■■□□□ 1.08
RAB35-201ENST00000229340 EPRSP07814 1512 aaKnown RBP21.81■■□□□ 1.08
RAB35-201ENST00000229340 GZF1Q9H116 711 aaPredicted RBP21.81■■□□□ 1.08
RAB35-201ENST00000229340 PANK2Q9BZ23 570 aa21.79■■□□□ 1.08
RAB35-201ENST00000229340 KIAA1107Q9UPP5 1409 aa21.79■■□□□ 1.08
RAB35-201ENST00000229340 PNNQ9H307 717 aaKnown RBP21.78■■□□□ 1.08
RAB35-201ENST00000229340 USP19O94966 1318 aa21.78■■□□□ 1.08
RAB35-201ENST00000229340 ZNF777Q9ULD5 760 aaPredicted RBP21.77■■□□□ 1.08
RAB35-201ENST00000229340 HSP90AA2PQ14568 343 aaPredicted RBP21.77■■□□□ 1.08
RAB35-201ENST00000229340 SPRYD3Q8NCJ5 442 aa21.77■■□□□ 1.08
RAB35-201ENST00000229340 ADAMTS8Q9UP79 889 aa21.77■■□□□ 1.08
RAB35-201ENST00000229340 L1TD1Q5T7N2 865 aaKnown RBP21.76■■□□□ 1.07
RAB35-201ENST00000229340 RALGAPBQ86X10 1494 aa21.76■■□□□ 1.07
RAB35-201ENST00000229340 TOPBP1Q92547 1522 aa21.76■■□□□ 1.07
RAB35-201ENST00000229340 XRCC6P12956 609 aaKnown RBP eCLIP21.76■■□□□ 1.07
RAB35-201ENST00000229340 PER1O15534 1290 aaPredicted RBP21.75■■□□□ 1.07
RAB35-201ENST00000229340 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
RAB35-201ENST00000229340 DUSP27Q5VZP5 1158 aa21.73■■□□□ 1.07
RAB35-201ENST00000229340 HSP90AA1P07900 732 aaKnown RBP21.73■■□□□ 1.07
RAB35-201ENST00000229340 DNMBPQ6XZF7 1577 aa21.72■■□□□ 1.07
RAB35-201ENST00000229340 DNMT1P26358 1616 aaKnown RBP21.72■■□□□ 1.07
RAB35-201ENST00000229340 IGHDP01880 384 aa21.71■■□□□ 1.07
RAB35-201ENST00000229340 BLMP54132 1417 aaPredicted RBP21.71■■□□□ 1.07
RAB35-201ENST00000229340 ERCC6Q03468 1493 aa21.71■■□□□ 1.07
RAB35-201ENST00000229340 PLEKHH1Q9ULM0 1364 aa21.71■■□□□ 1.07
RAB35-201ENST00000229340 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
RAB35-201ENST00000229340 E9PCH4 1651 aa21.7■■□□□ 1.06
RAB35-201ENST00000229340 BECN1Q14457 450 aa21.69■■□□□ 1.06
RAB35-201ENST00000229340 PANK3Q9H999 370 aa21.69■■□□□ 1.06
RAB35-201ENST00000229340 KIF21AQ7Z4S6 1674 aa21.69■■□□□ 1.06
RAB35-201ENST00000229340 GOLGA6L3A6NEY3 463 aa21.69■■□□□ 1.06
RAB35-201ENST00000229340 UHRF1BP1Q6BDS2 1440 aa21.68■■□□□ 1.06
RAB35-201ENST00000229340 ZMYM4Q5VZL5 1548 aa21.67■■□□□ 1.06
RAB35-201ENST00000229340 BCAR3O75815 825 aa21.67■■□□□ 1.06
RAB35-201ENST00000229340 NBPF1Q3BBV0 1214 aa21.67■■□□□ 1.06
RAB35-201ENST00000229340 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.67■■□□□ 1.06
RAB35-201ENST00000229340 URB2Q14146 1524 aaKnown RBP21.66■■□□□ 1.06
RAB35-201ENST00000229340 KIAA0586Q9BVV6 1533 aa21.64■■□□□ 1.06
RAB35-201ENST00000229340 CLCN1P35523 988 aa21.64■■□□□ 1.06
RAB35-201ENST00000229340 GOLGA2Q08379 1002 aa21.64■■□□□ 1.06
RAB35-201ENST00000229340 RGL3Q3MIN7 710 aa21.64■■□□□ 1.06
RAB35-201ENST00000229340 ANTXR1Q9H6X2 564 aa21.64■■□□□ 1.06
RAB35-201ENST00000229340 NUP155O75694 1391 aa21.64■■□□□ 1.05
RAB35-201ENST00000229340 CFDP1Q9UEE9 299 aaPredicted RBP21.63■■□□□ 1.05
RAB35-201ENST00000229340 CCDC146Q8IYE0 955 aa21.62■■□□□ 1.05
RAB35-201ENST00000229340 WDR43Q15061 677 aaKnown RBP eCLIP21.62■■□□□ 1.05
RAB35-201ENST00000229340 SPINK5Q9NQ38 1064 aaPredicted RBP21.62■■□□□ 1.05
RAB35-201ENST00000229340 GAPVD1Q14C86 1478 aa21.61■■□□□ 1.05
RAB35-201ENST00000229340 RRP9O43818 475 aaKnown RBP21.61■■□□□ 1.05
RAB35-201ENST00000229340 DISP3Q9P2K9 1392 aa21.6■■□□□ 1.05
RAB35-201ENST00000229340 TBC1D2Q9BYX2 928 aa21.6■■□□□ 1.05
RAB35-201ENST00000229340 ZNF608Q9ULD9 1512 aaPredicted RBP21.59■■□□□ 1.05
RAB35-201ENST00000229340 FSD2A1L4K1 749 aa21.58■■□□□ 1.04
RAB35-201ENST00000229340 PLEKHH2Q8IVE3 1493 aa21.57■■□□□ 1.04
RAB35-201ENST00000229340 WDR62O43379 1518 aa21.56■■□□□ 1.04
RAB35-201ENST00000229340 MCM4P33991 863 aa21.56■■□□□ 1.04
RAB35-201ENST00000229340 SLFN5Q08AF3 891 aa21.56■■□□□ 1.04
RAB35-201ENST00000229340 PANK1Q8TE04 598 aa21.56■■□□□ 1.04
RAB35-201ENST00000229340 COG6Q9Y2V7 657 aa21.56■■□□□ 1.04
RAB35-201ENST00000229340 ERBB4Q15303 1308 aa21.55■■□□□ 1.04
RAB35-201ENST00000229340 ANKRD50Q9ULJ7 1429 aa21.54■■□□□ 1.04
RAB35-201ENST00000229340 CAMSAP2Q08AD1 1489 aa21.54■■□□□ 1.04
RAB35-201ENST00000229340 VIRMAQ69YN4 1812 aaKnown RBP21.53■■□□□ 1.04
RAB35-201ENST00000229340 ZNF521Q96K83 1311 aa21.53■■□□□ 1.04
RAB35-201ENST00000229340 TRAK2O60296 914 aa21.52■■□□□ 1.04
RAB35-201ENST00000229340 NLRP1Q9C000 1473 aa21.52■■□□□ 1.04
RAB35-201ENST00000229340 CANXP27824 592 aaKnown RBP21.52■■□□□ 1.03
RAB35-201ENST00000229340 PPP2R1AP30153 589 aa21.51■■□□□ 1.03
RAB35-201ENST00000229340 UPF2Q9HAU5 1272 aaKnown RBP21.51■■□□□ 1.03
RAB35-201ENST00000229340 EIF3AQ14152 1382 aaKnown RBP21.51■■□□□ 1.03
RAB35-201ENST00000229340 ARHGEF12Q9NZN5 1544 aa21.51■■□□□ 1.03
RAB35-201ENST00000229340 ANKRD30AQ9BXX3 1397 aa21.5■■□□□ 1.03
RAB35-201ENST00000229340 APAF1O14727 1248 aa21.5■■□□□ 1.03
RAB35-201ENST00000229340 TESK2Q96S53 571 aa21.5■■□□□ 1.03
RAB35-201ENST00000229340 DMRT2Q9Y5R5 561 aa21.5■■□□□ 1.03
RAB35-201ENST00000229340 ESPNB1AK53 854 aa21.49■■□□□ 1.03
RAB35-201ENST00000229340 MYH16Q9H6N6 1097 aa21.49■■□□□ 1.03
RAB35-201ENST00000229340 PRG4Q92954 1404 aaPredicted RBP21.49■■□□□ 1.03
RAB35-201ENST00000229340 MAPK8IP3Q9UPT6 1336 aa21.49■■□□□ 1.03
RAB35-201ENST00000229340 TBC1D32Q96NH3 1257 aa21.49■■□□□ 1.03
RAB35-201ENST00000229340 CLUAP1Q96AJ1 413 aa21.48■■□□□ 1.03
RAB35-201ENST00000229340 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
RAB35-201ENST00000229340 INSRP06213 1382 aa21.47■■□□□ 1.03
RAB35-201ENST00000229340 GRPEL1Q9HAV7 217 aa21.46■■□□□ 1.03
RAB35-201ENST00000229340 MRE11P49959 708 aa21.46■■□□□ 1.03
RAB35-201ENST00000229340 COL17A1Q9UMD9 1497 aaPredicted RBP21.45■■□□□ 1.02
RAB35-201ENST00000229340 KNSTRNQ9Y448 316 aa21.45■■□□□ 1.02
RAB35-201ENST00000229340 IQGAP2Q13576 1575 aa21.44■■□□□ 1.02
RAB35-201ENST00000229340 ADGBQ8N7X0 1667 aa21.44■■□□□ 1.02
RAB35-201ENST00000229340 MRC2Q9UBG0 1479 aa21.44■■□□□ 1.02
RAB35-201ENST00000229340 TMF1P82094 1093 aa21.43■■□□□ 1.02
RAB35-201ENST00000229340 PRAG1Q86YV5 1406 aa21.43■■□□□ 1.02
RAB35-201ENST00000229340 TNNQ9UQP3 1299 aa21.42■■□□□ 1.02
RAB35-201ENST00000229340 TRIM44Q96DX7 344 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms