RNA–Protein interactions for RNA: ENST00000229214.8

KRR1-201, Transcript of KRR1, small subunit processome component homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRR1, Length 10,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRR1-201ENST00000229214 ZNF428Q96B54 188 aa6.5□□□□□ -1.37
KRR1-201ENST00000229214 DAPK1P53355 1430 aa6.49□□□□□ -1.37
KRR1-201ENST00000229214 HMGN5P82970 282 aaKnown RBP6.49□□□□□ -1.37
KRR1-201ENST00000229214 KRI1Q8N9T8 703 aaKnown RBP6.49□□□□□ -1.37
KRR1-201ENST00000229214 GNL2Q13823 731 aaKnown RBP6.49□□□□□ -1.37
KRR1-201ENST00000229214 TMF1P82094 1093 aa6.49□□□□□ -1.37
KRR1-201ENST00000229214 RRP12Q5JTH9 1297 aaKnown RBP6.49□□□□□ -1.37
KRR1-201ENST00000229214 TSPYL1Q9H0U9 437 aa6.49□□□□□ -1.37
KRR1-201ENST00000229214 KCNJ4P48050 445 aa6.49□□□□□ -1.37
KRR1-201ENST00000229214 PDCP20941 246 aa6.49□□□□□ -1.37
KRR1-201ENST00000229214 IQCEQ6IPM2 695 aa6.49□□□□□ -1.37
KRR1-201ENST00000229214 NAT10Q9H0A0 1025 aaKnown RBP6.49□□□□□ -1.37
KRR1-201ENST00000229214 SH3BGRP55822 239 aaPredicted RBP6.48□□□□□ -1.37
KRR1-201ENST00000229214 RABEP1Q15276 862 aa6.48□□□□□ -1.37
KRR1-201ENST00000229214 CCDC191Q8NCU4 936 aa6.48□□□□□ -1.37
KRR1-201ENST00000229214 NOL10Q9BSC4 688 aaKnown RBP6.48□□□□□ -1.37
KRR1-201ENST00000229214 HOOK3Q86VS8 718 aa6.48□□□□□ -1.37
KRR1-201ENST00000229214 MRS2Q9HD23 443 aa6.48□□□□□ -1.37
KRR1-201ENST00000229214 FMNL3Q8IVF7 1028 aa6.48□□□□□ -1.37
KRR1-201ENST00000229214 TERF2IPQ9NYB0 399 aa6.48□□□□□ -1.37
KRR1-201ENST00000229214 ARHGAP35Q9NRY4 1499 aa6.48□□□□□ -1.37
KRR1-201ENST00000229214 REC8O95072 547 aa6.48□□□□□ -1.37
KRR1-201ENST00000229214 CAVIN2O95810 425 aa6.48□□□□□ -1.37
KRR1-201ENST00000229214 FAM107BQ9H098 131 aa6.47□□□□□ -1.37
KRR1-201ENST00000229214 PPP4R2Q9NY27 417 aa6.47□□□□□ -1.37
KRR1-201ENST00000229214 SUPT16HQ9Y5B9 1047 aaKnown RBP6.47□□□□□ -1.37
KRR1-201ENST00000229214 ANKRD30BQ9BXX2 1392 aa6.47□□□□□ -1.37
KRR1-201ENST00000229214 RWDD1Q9H446 243 aaPredicted RBP6.47□□□□□ -1.37
KRR1-201ENST00000229214 MFAP1P55081 439 aaKnown RBP6.47□□□□□ -1.37
KRR1-201ENST00000229214 CCDC66A2RUB6 948 aa6.47□□□□□ -1.37
KRR1-201ENST00000229214 LETM1O95202 739 aaPredicted RBP6.47□□□□□ -1.37
KRR1-201ENST00000229214 TCEAL9Q9UHQ7 104 aa6.47□□□□□ -1.37
KRR1-201ENST00000229214 HSP90AB4PQ58FF6 505 aa6.46□□□□□ -1.37
KRR1-201ENST00000229214 KIF3BO15066 747 aa6.46□□□□□ -1.37
KRR1-201ENST00000229214 GTPBP4Q9BZE4 634 aaKnown RBP6.46□□□□□ -1.37
KRR1-201ENST00000229214 VIMP08670 466 aaKnown RBP6.46□□□□□ -1.38
KRR1-201ENST00000229214 USH1CQ9Y6N9 552 aa6.46□□□□□ -1.38
KRR1-201ENST00000229214 CNGA1P29973 690 aa6.46□□□□□ -1.38
KRR1-201ENST00000229214 GBP2P32456 591 aaPredicted RBP6.46□□□□□ -1.38
KRR1-201ENST00000229214 RUFY2Q8WXA3 655 aa6.46□□□□□ -1.38
KRR1-201ENST00000229214 MNS1Q8NEH6 495 aa6.46□□□□□ -1.38
KRR1-201ENST00000229214 PDCL2Q8N4E4 241 aa6.46□□□□□ -1.38
KRR1-201ENST00000229214 FAM114A2Q9NRY5 505 aa6.46□□□□□ -1.38
KRR1-201ENST00000229214 CT47B1P0C2W7 299 aaPredicted RBP6.45□□□□□ -1.38
KRR1-201ENST00000229214 RNF20Q5VTR2 975 aa6.45□□□□□ -1.38
KRR1-201ENST00000229214 MCM3P25205 808 aa6.45□□□□□ -1.38
KRR1-201ENST00000229214 KIF2AO00139 706 aaPredicted RBP6.45□□□□□ -1.38
KRR1-201ENST00000229214 HSP90B2PQ58FF3 399 aa6.45□□□□□ -1.38
KRR1-201ENST00000229214 AK7Q96M32 723 aa6.45□□□□□ -1.38
KRR1-201ENST00000229214 PLEKHH2Q8IVE3 1493 aa6.45□□□□□ -1.38
KRR1-201ENST00000229214 ABCC9O60706 1549 aa6.45□□□□□ -1.38
KRR1-201ENST00000229214 MIA2Q96PC5 1412 aa6.44□□□□□ -1.38
KRR1-201ENST00000229214 XBP1P17861 261 aa6.44□□□□□ -1.38
KRR1-201ENST00000229214 RTF1Q92541 710 aaKnown RBP6.44□□□□□ -1.38
KRR1-201ENST00000229214 CGNL1Q0VF96 1302 aa6.44□□□□□ -1.38
KRR1-201ENST00000229214 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.43□□□□□ -1.38
KRR1-201ENST00000229214 V9GYY5 206 aaPredicted RBP6.43□□□□□ -1.38
KRR1-201ENST00000229214 CT47A1Q5JQC4 288 aaPredicted RBP6.43□□□□□ -1.38
KRR1-201ENST00000229214 NPHP1O15259 732 aa6.43□□□□□ -1.38
KRR1-201ENST00000229214 EZRP15311 586 aaKnown RBP6.43□□□□□ -1.38
KRR1-201ENST00000229214 DIAPH3Q9NSV4 1193 aa6.43□□□□□ -1.38
KRR1-201ENST00000229214 GOLGA6L10A0A0M3HER8 536 aa6.43□□□□□ -1.38
KRR1-201ENST00000229214 HSP90AB1P08238 724 aaKnown RBP6.43□□□□□ -1.38
KRR1-201ENST00000229214 DHX16O60231 1041 aaKnown RBP6.43□□□□□ -1.38
KRR1-201ENST00000229214 A6NNZ2 444 aa6.43□□□□□ -1.38
KRR1-201ENST00000229214 HIP1O00291 1037 aa6.43□□□□□ -1.38
KRR1-201ENST00000229214 TUBB8Q3ZCM7 444 aa6.43□□□□□ -1.38
KRR1-201ENST00000229214 RBM26Q5T8P6 1007 aaKnown RBP6.43□□□□□ -1.38
KRR1-201ENST00000229214 TUBB4AP04350 444 aa6.42□□□□□ -1.38
KRR1-201ENST00000229214 CFDP1Q9UEE9 299 aaPredicted RBP6.42□□□□□ -1.38
KRR1-201ENST00000229214 HDGFL2Q7Z4V5 671 aaPredicted RBP6.42□□□□□ -1.38
KRR1-201ENST00000229214 CHMP5Q9NZZ3 219 aa6.42□□□□□ -1.38
KRR1-201ENST00000229214 CCDC144AA2RUR9 1427 aa6.42□□□□□ -1.38
KRR1-201ENST00000229214 STK31Q9BXU1 1019 aa6.42□□□□□ -1.38
KRR1-201ENST00000229214 TUBBP07437 444 aa6.42□□□□□ -1.38
KRR1-201ENST00000229214 MIER1Q8N108 512 aa6.42□□□□□ -1.38
KRR1-201ENST00000229214 ERLIN2O94905 339 aa6.41□□□□□ -1.38
KRR1-201ENST00000229214 JMYQ8N9B5 988 aa6.41□□□□□ -1.38
KRR1-201ENST00000229214 KIF21BO75037 1637 aa6.41□□□□□ -1.38
KRR1-201ENST00000229214 GOLGA6L19H0YKK7 550 aa6.41□□□□□ -1.38
KRR1-201ENST00000229214 TRAF1Q13077 416 aa6.41□□□□□ -1.38
KRR1-201ENST00000229214 ZKSCAN1P17029 563 aaPredicted RBP6.41□□□□□ -1.38
KRR1-201ENST00000229214 PPP4R3BQ5MIZ7 849 aa6.41□□□□□ -1.38
KRR1-201ENST00000229214 RNF214Q8ND24 703 aa6.41□□□□□ -1.38
KRR1-201ENST00000229214 ATAD2Q6PL18 1390 aa6.4□□□□□ -1.38
KRR1-201ENST00000229214 PPM1EQ8WY54 764 aa6.4□□□□□ -1.38
KRR1-201ENST00000229214 PPP6R1Q9UPN7 881 aa6.4□□□□□ -1.38
KRR1-201ENST00000229214 CNTLNQ9NXG0 1405 aa6.4□□□□□ -1.38
KRR1-201ENST00000229214 DHX29Q7Z478 1369 aaKnown RBP6.4□□□□□ -1.38
KRR1-201ENST00000229214 OS9Q13438 667 aaPredicted RBP6.4□□□□□ -1.38
KRR1-201ENST00000229214 KLHL34Q8N239 644 aa6.4□□□□□ -1.38
KRR1-201ENST00000229214 ZNF710Q8N1W2 664 aa6.4□□□□□ -1.38
KRR1-201ENST00000229214 MYO10Q9HD67 2058 aa6.4□□□□□ -1.39
KRR1-201ENST00000229214 FAM184AQ8NB25 1140 aa6.4□□□□□ -1.39
KRR1-201ENST00000229214 ZHX1Q9UKY1 873 aaPredicted RBP6.4□□□□□ -1.39
KRR1-201ENST00000229214 VPS8Q8N3P4 1428 aa6.4□□□□□ -1.39
KRR1-201ENST00000229214 DCAF8L1A6NGE4 600 aa6.4□□□□□ -1.39
KRR1-201ENST00000229214 CASTP20810 708 aaKnown RBP6.39□□□□□ -1.39
KRR1-201ENST00000229214 PYM1Q9BRP8 204 aaKnown RBP6.39□□□□□ -1.39
KRR1-201ENST00000229214 BRMS1Q9HCU9 246 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms