RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 PHF23Q9BUL5 403 aaPredicted RBP16.52■□□□□ 0.24
COL1A1-201ENST00000225964 MPHOSPH9Q99550 1183 aa16.52■□□□□ 0.23
COL1A1-201ENST00000225964 CEP89Q96ST8 783 aa16.51■□□□□ 0.23
COL1A1-201ENST00000225964 LMOD3Q0VAK6 560 aa16.5■□□□□ 0.23
COL1A1-201ENST00000225964 CSPP1Q1MSJ5 1256 aa16.5■□□□□ 0.23
COL1A1-201ENST00000225964 CCER2I3L3R5 266 aa16.49■□□□□ 0.23
COL1A1-201ENST00000225964 RAD21O60216 631 aa16.49■□□□□ 0.23
COL1A1-201ENST00000225964 C1orf141Q5JVX7 400 aa16.49■□□□□ 0.23
COL1A1-201ENST00000225964 SOGA1O94964 1423 aa16.49■□□□□ 0.23
COL1A1-201ENST00000225964 TRIM34Q9BYJ4 488 aa16.48■□□□□ 0.23
COL1A1-201ENST00000225964 CLUAP1Q96AJ1 413 aa16.48■□□□□ 0.23
COL1A1-201ENST00000225964 PDS5BQ9NTI5 1447 aa16.48■□□□□ 0.23
COL1A1-201ENST00000225964 CTDP1Q9Y5B0 961 aaPredicted RBP16.47■□□□□ 0.23
COL1A1-201ENST00000225964 PES1O00541 588 aaKnown RBP16.47■□□□□ 0.23
COL1A1-201ENST00000225964 FBXW7Q969H0 707 aa16.46■□□□□ 0.23
COL1A1-201ENST00000225964 FOXD4L5Q5VV16 416 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-201ENST00000225964 FOXD4L4Q8WXT5 416 aaPredicted RBP16.46■□□□□ 0.23
COL1A1-201ENST00000225964 TRAK1Q9UPV9 953 aa16.46■□□□□ 0.23
COL1A1-201ENST00000225964 KIF16BQ96L93 1317 aa16.46■□□□□ 0.23
COL1A1-201ENST00000225964 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
COL1A1-201ENST00000225964 TCEAL9Q9UHQ7 104 aa16.46■□□□□ 0.22
COL1A1-201ENST00000225964 SF3A1Q15459 793 aaKnown RBP16.45■□□□□ 0.22
COL1A1-201ENST00000225964 WWC1Q8IX03 1113 aa16.45■□□□□ 0.22
COL1A1-201ENST00000225964 TPD52L1Q16890 204 aaPredicted RBP16.44■□□□□ 0.22
COL1A1-201ENST00000225964 KRI1Q8N9T8 703 aaKnown RBP16.44■□□□□ 0.22
COL1A1-201ENST00000225964 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
COL1A1-201ENST00000225964 CECR2Q9BXF3 1484 aa16.44■□□□□ 0.22
COL1A1-201ENST00000225964 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
COL1A1-201ENST00000225964 GOLGA6L1Q8N7Z2 621 aa16.44■□□□□ 0.22
COL1A1-201ENST00000225964 CENPJQ9HC77 1338 aaPredicted RBP16.43■□□□□ 0.22
COL1A1-201ENST00000225964 KLHL34Q8N239 644 aa16.43■□□□□ 0.22
COL1A1-201ENST00000225964 RILPL2Q969X0 211 aa16.43■□□□□ 0.22
COL1A1-201ENST00000225964 TDRD9Q8NDG6 1382 aaKnown RBP16.43■□□□□ 0.22
COL1A1-201ENST00000225964 H3BQV1 296 aa16.43■□□□□ 0.22
COL1A1-201ENST00000225964 DEKP35659 375 aaKnown RBP16.43■□□□□ 0.22
COL1A1-201ENST00000225964 IFFO2Q5TF58 517 aa16.43■□□□□ 0.22
COL1A1-201ENST00000225964 AKAP17AQ02040 695 aaKnown RBP16.42■□□□□ 0.22
COL1A1-201ENST00000225964 ABCC8Q09428 1581 aa16.42■□□□□ 0.22
COL1A1-201ENST00000225964 TPM3P06753 285 aa16.42■□□□□ 0.22
COL1A1-201ENST00000225964 RRP7AQ9Y3A4 280 aaKnown RBP16.41■□□□□ 0.22
COL1A1-201ENST00000225964 AMOTL1Q8IY63 956 aa16.41■□□□□ 0.22
COL1A1-201ENST00000225964 SYTL4Q96C24 671 aaPredicted RBP16.41■□□□□ 0.22
COL1A1-201ENST00000225964 FMN1Q68DA7 1419 aa16.41■□□□□ 0.22
COL1A1-201ENST00000225964 KANK4Q5T7N3 995 aaPredicted RBP16.41■□□□□ 0.22
COL1A1-201ENST00000225964 TTC5Q8N0Z6 440 aa16.4■□□□□ 0.22
COL1A1-201ENST00000225964 COG3Q96JB2 828 aa16.39■□□□□ 0.21
COL1A1-201ENST00000225964 TCERG1O14776 1098 aaKnown RBP16.39■□□□□ 0.21
COL1A1-201ENST00000225964 CWC22Q9HCG8 908 aaKnown RBP16.39■□□□□ 0.21
COL1A1-201ENST00000225964 KIF3AQ9Y496 699 aa16.39■□□□□ 0.21
COL1A1-201ENST00000225964 ST18O60284 1047 aa16.38■□□□□ 0.21
COL1A1-201ENST00000225964 RAB3GAP2Q9H2M9 1393 aa16.38■□□□□ 0.21
COL1A1-201ENST00000225964 FAM184AQ8NB25 1140 aa16.38■□□□□ 0.21
COL1A1-201ENST00000225964 SYNE3Q6ZMZ3 975 aa16.37■□□□□ 0.21
COL1A1-201ENST00000225964 ELL2O00472 640 aaPredicted RBP16.37■□□□□ 0.21
COL1A1-201ENST00000225964 CNKSR2Q8WXI2 1034 aa16.37■□□□□ 0.21
COL1A1-201ENST00000225964 TPM2P07951 284 aa16.36■□□□□ 0.21
COL1A1-201ENST00000225964 EIF2S2P20042 333 aaKnown RBP16.36■□□□□ 0.21
COL1A1-201ENST00000225964 FBXO3Q9UK99 471 aa16.36■□□□□ 0.21
COL1A1-201ENST00000225964 GOLGA6L3A6NEY3 463 aa16.35■□□□□ 0.21
COL1A1-201ENST00000225964 VPS37DQ86XT2 251 aa16.35■□□□□ 0.21
COL1A1-201ENST00000225964 PHF14O94880 888 aa16.35■□□□□ 0.21
COL1A1-201ENST00000225964 TEFQ10587 303 aa16.35■□□□□ 0.21
COL1A1-201ENST00000225964 VPS8Q8N3P4 1428 aa16.35■□□□□ 0.21
COL1A1-201ENST00000225964 CCDC18Q5T9S5 1454 aa16.35■□□□□ 0.21
COL1A1-201ENST00000225964 TSR1Q2NL82 804 aaKnown RBP16.34■□□□□ 0.21
COL1A1-201ENST00000225964 RBM19Q9Y4C8 960 aaKnown RBP16.34■□□□□ 0.21
COL1A1-201ENST00000225964 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
COL1A1-201ENST00000225964 DHX16O60231 1041 aaKnown RBP16.33■□□□□ 0.2
COL1A1-201ENST00000225964 SMARCA2P51531 1590 aa16.33■□□□□ 0.2
COL1A1-201ENST00000225964 NEXNQ0ZGT2 675 aa16.32■□□□□ 0.2
COL1A1-201ENST00000225964 ANKRD45Q5TZF3 282 aa16.32■□□□□ 0.2
COL1A1-201ENST00000225964 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
COL1A1-201ENST00000225964 FOXD4L6Q3SYB3 417 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-201ENST00000225964 FOXD4L3Q6VB84 417 aaPredicted RBP16.32■□□□□ 0.2
COL1A1-201ENST00000225964 APPP05067 770 aa16.31■□□□□ 0.2
COL1A1-201ENST00000225964 PSME1Q06323 249 aa16.31■□□□□ 0.2
COL1A1-201ENST00000225964 SAMD1Q6SPF0 538 aaPredicted RBP16.31■□□□□ 0.2
COL1A1-201ENST00000225964 CCDC88BA6NC98 1476 aa16.31■□□□□ 0.2
COL1A1-201ENST00000225964 C9orf78Q9NZ63 289 aaPredicted RBP16.31■□□□□ 0.2
COL1A1-201ENST00000225964 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
COL1A1-201ENST00000225964 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
COL1A1-201ENST00000225964 PCMTD1Q96MG8 357 aaPredicted RBP16.3■□□□□ 0.2
COL1A1-201ENST00000225964 BCL2L13Q9BXK5 485 aa16.3■□□□□ 0.2
COL1A1-201ENST00000225964 FHOD3Q2V2M9 1422 aa16.3■□□□□ 0.2
COL1A1-201ENST00000225964 TRIM29Q14134 588 aa16.29■□□□□ 0.2
COL1A1-201ENST00000225964 LRRFIP1Q32MZ4 808 aaKnown RBP16.29■□□□□ 0.2
COL1A1-201ENST00000225964 EVC2Q86UK5 1308 aa16.29■□□□□ 0.2
COL1A1-201ENST00000225964 USP35Q9P2H5 1018 aa16.29■□□□□ 0.2
COL1A1-201ENST00000225964 DIAPH3Q9NSV4 1193 aa16.29■□□□□ 0.2
COL1A1-201ENST00000225964 CYB5RLQ6IPT4 315 aa16.29■□□□□ 0.2
COL1A1-201ENST00000225964 L3MBTL2Q969R5 705 aa16.29■□□□□ 0.2
COL1A1-201ENST00000225964 TNNT3P45378 269 aaPredicted RBP16.28■□□□□ 0.2
COL1A1-201ENST00000225964 RSPH4AQ5TD94 716 aa16.28■□□□□ 0.2
COL1A1-201ENST00000225964 KIF15Q9NS87 1388 aa16.28■□□□□ 0.2
COL1A1-201ENST00000225964 DCAF8L1A6NGE4 600 aa16.28■□□□□ 0.2
COL1A1-201ENST00000225964 PANK3Q9H999 370 aa16.28■□□□□ 0.2
COL1A1-201ENST00000225964 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
COL1A1-201ENST00000225964 NLRP13Q86W25 1043 aa16.28■□□□□ 0.2
COL1A1-201ENST00000225964 CGNL1Q0VF96 1302 aa16.27■□□□□ 0.2
COL1A1-201ENST00000225964 GOLGA6L19H0YKK7 550 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms