RNA–Protein interactions for RNA: ENST00000222584.7

SP4-201, Transcript of Sp4 transcription factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SP4, Length 6,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP4-201ENST00000222584 TMX4Q9H1E5 349 aaPredicted RBP11.32□□□□□ -0.6
SP4-201ENST00000222584 FRAT2O75474 233 aaPredicted RBP11.32□□□□□ -0.6
SP4-201ENST00000222584 CABP2Q9NPB3 220 aa11.32□□□□□ -0.6
SP4-201ENST00000222584 CCDC18Q5T9S5 1454 aa11.32□□□□□ -0.6
SP4-201ENST00000222584 ST20-MTHFSA0A0A6YYL1 179 aa11.32□□□□□ -0.6
SP4-201ENST00000222584 PROSER2Q86WR7 435 aaPredicted RBP11.31□□□□□ -0.6
SP4-201ENST00000222584 TXNDC2Q86VQ3 553 aa11.31□□□□□ -0.6
SP4-201ENST00000222584 ITPRIPQ8IWB1 547 aa11.3□□□□□ -0.6
SP4-201ENST00000222584 RAD21O60216 631 aa11.3□□□□□ -0.6
SP4-201ENST00000222584 SAMD1Q6SPF0 538 aaPredicted RBP11.29□□□□□ -0.6
SP4-201ENST00000222584 TERF2IPQ9NYB0 399 aa11.29□□□□□ -0.6
SP4-201ENST00000222584 GORABQ5T7V8 394 aa11.29□□□□□ -0.6
SP4-201ENST00000222584 HMOX1P09601 288 aa11.29□□□□□ -0.6
SP4-201ENST00000222584 PANK3Q9H999 370 aa11.28□□□□□ -0.6
SP4-201ENST00000222584 CDK11BP21127 795 aaKnown RBP11.28□□□□□ -0.6
SP4-201ENST00000222584 NLRP2Q9NX02 1062 aa11.28□□□□□ -0.6
SP4-201ENST00000222584 IGF1RP08069 1367 aa11.27□□□□□ -0.61
SP4-201ENST00000222584 NOL8Q76FK4 1167 aaKnown RBP11.27□□□□□ -0.61
SP4-201ENST00000222584 DNTTIP2Q5QJE6 756 aaKnown RBP11.27□□□□□ -0.61
SP4-201ENST00000222584 COG3Q96JB2 828 aa11.27□□□□□ -0.61
SP4-201ENST00000222584 PTMAP06454 111 aaKnown RBP11.26□□□□□ -0.61
SP4-201ENST00000222584 C1orf141Q5JVX7 400 aa11.26□□□□□ -0.61
SP4-201ENST00000222584 CASC1Q6TDU7 716 aa11.26□□□□□ -0.61
SP4-201ENST00000222584 ARHGAP5Q13017 1502 aa11.26□□□□□ -0.61
SP4-201ENST00000222584 PNNQ9H307 717 aaKnown RBP11.25□□□□□ -0.61
SP4-201ENST00000222584 CCDC144AA2RUR9 1427 aa11.25□□□□□ -0.61
SP4-201ENST00000222584 KTN1Q86UP2 1357 aaKnown RBP11.25□□□□□ -0.61
SP4-201ENST00000222584 SNAPC4Q5SXM2 1469 aa11.25□□□□□ -0.61
SP4-201ENST00000222584 TRIM44Q96DX7 344 aaPredicted RBP11.25□□□□□ -0.61
SP4-201ENST00000222584 GGNBP2Q9H3C7 697 aa11.24□□□□□ -0.61
SP4-201ENST00000222584 VGFO15240 615 aaPredicted RBP11.24□□□□□ -0.61
SP4-201ENST00000222584 ADAMTS2O95450 1211 aa11.24□□□□□ -0.61
SP4-201ENST00000222584 AIMP1Q12904 312 aaKnown RBP11.23□□□□□ -0.61
SP4-201ENST00000222584 NAP1L5Q96NT1 182 aaPredicted RBP11.23□□□□□ -0.61
SP4-201ENST00000222584 TOMM22Q9NS69 142 aa11.23□□□□□ -0.61
SP4-201ENST00000222584 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
SP4-201ENST00000222584 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
SP4-201ENST00000222584 STK31Q9BXU1 1019 aa11.22□□□□□ -0.61
SP4-201ENST00000222584 ABTB2Q8N961 1025 aa11.22□□□□□ -0.61
SP4-201ENST00000222584 SCAPERQ9BY12 1400 aa11.22□□□□□ -0.61
SP4-201ENST00000222584 ERICH6BQ5W0A0 696 aa11.21□□□□□ -0.61
SP4-201ENST00000222584 NLRP6P59044 892 aa11.21□□□□□ -0.61
SP4-201ENST00000222584 WWC3Q9ULE0 1092 aa11.2□□□□□ -0.62
SP4-201ENST00000222584 TRIM6-TRIM34B2RNG4 842 aa11.2□□□□□ -0.62
SP4-201ENST00000222584 RBM42Q9BTD8 480 aaKnown RBP11.2□□□□□ -0.62
SP4-201ENST00000222584 MRC2Q9UBG0 1479 aa11.2□□□□□ -0.62
SP4-201ENST00000222584 TTC5Q8N0Z6 440 aa11.2□□□□□ -0.62
SP4-201ENST00000222584 TEFQ10587 303 aa11.19□□□□□ -0.62
SP4-201ENST00000222584 PLIN1O60240 522 aa11.19□□□□□ -0.62
SP4-201ENST00000222584 CFAP70Q5T0N1 1121 aa11.19□□□□□ -0.62
SP4-201ENST00000222584 FOXD4L1Q9NU39 408 aa11.18□□□□□ -0.62
SP4-201ENST00000222584 EIF3AQ14152 1382 aaKnown RBP11.18□□□□□ -0.62
SP4-201ENST00000222584 BECN1Q14457 450 aa11.17□□□□□ -0.62
SP4-201ENST00000222584 KIF15Q9NS87 1388 aa11.17□□□□□ -0.62
SP4-201ENST00000222584 ZC3H6P61129 1189 aaKnown RBP11.17□□□□□ -0.62
SP4-201ENST00000222584 PDE4CQ08493 712 aa11.17□□□□□ -0.62
SP4-201ENST00000222584 VPS53Q5VIR6 699 aa11.17□□□□□ -0.62
SP4-201ENST00000222584 EVC2Q86UK5 1308 aa11.17□□□□□ -0.62
SP4-201ENST00000222584 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
SP4-201ENST00000222584 HSP90AB1P08238 724 aaKnown RBP11.16□□□□□ -0.62
SP4-201ENST00000222584 ZRSR1Q15695 479 aaKnown RBP11.16□□□□□ -0.62
SP4-201ENST00000222584 GLIPR1L2Q4G1C9 344 aa11.16□□□□□ -0.62
SP4-201ENST00000222584 GZF1Q9H116 711 aaPredicted RBP11.16□□□□□ -0.62
SP4-201ENST00000222584 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
SP4-201ENST00000222584 RSPH4AQ5TD94 716 aa11.15□□□□□ -0.62
SP4-201ENST00000222584 SF3B2Q13435 895 aaKnown RBP11.15□□□□□ -0.62
SP4-201ENST00000222584 FBXO31Q5XUX0 539 aaPredicted RBP11.15□□□□□ -0.62
SP4-201ENST00000222584 MTMR7Q9Y216 660 aa11.15□□□□□ -0.63
SP4-201ENST00000222584 FYB1O15117 783 aa11.14□□□□□ -0.63
SP4-201ENST00000222584 FOXD4L5Q5VV16 416 aaPredicted RBP11.14□□□□□ -0.63
SP4-201ENST00000222584 FOXD4L4Q8WXT5 416 aaPredicted RBP11.14□□□□□ -0.63
SP4-201ENST00000222584 KDM4AO75164 1064 aa11.14□□□□□ -0.63
SP4-201ENST00000222584 HSPA2P54652 639 aa11.14□□□□□ -0.63
SP4-201ENST00000222584 GNL2Q13823 731 aaKnown RBP11.14□□□□□ -0.63
SP4-201ENST00000222584 TOM1L2Q6ZVM7 507 aa11.13□□□□□ -0.63
SP4-201ENST00000222584 RAPGEF4Q8WZA2 1011 aa11.13□□□□□ -0.63
SP4-201ENST00000222584 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
SP4-201ENST00000222584 BICDL1Q6ZP65 573 aa11.12□□□□□ -0.63
SP4-201ENST00000222584 NCAPD3P42695 1498 aa11.11□□□□□ -0.63
SP4-201ENST00000222584 ANP32EQ9BTT0 268 aa11.11□□□□□ -0.63
SP4-201ENST00000222584 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
SP4-201ENST00000222584 NBPF1Q3BBV0 1214 aa11.11□□□□□ -0.63
SP4-201ENST00000222584 CHMP4CQ96CF2 233 aa11.11□□□□□ -0.63
SP4-201ENST00000222584 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.11□□□□□ -0.63
SP4-201ENST00000222584 HSP90B1P14625 803 aaKnown RBP11.1□□□□□ -0.63
SP4-201ENST00000222584 FOXD4L6Q3SYB3 417 aaPredicted RBP11.1□□□□□ -0.63
SP4-201ENST00000222584 FOXD4L3Q6VB84 417 aaPredicted RBP11.1□□□□□ -0.63
SP4-201ENST00000222584 SLC4A3P48751 1232 aa11.1□□□□□ -0.63
SP4-201ENST00000222584 WWC1Q8IX03 1113 aa11.1□□□□□ -0.63
SP4-201ENST00000222584 GOLGA6L22H0YM25 854 aa11.1□□□□□ -0.63
SP4-201ENST00000222584 ANKLE2Q86XL3 938 aa11.1□□□□□ -0.63
SP4-201ENST00000222584 NOP58Q9Y2X3 529 aaKnown RBP11.1□□□□□ -0.63
SP4-201ENST00000222584 TOPBP1Q92547 1522 aa11.1□□□□□ -0.63
SP4-201ENST00000222584 APAF1O14727 1248 aa11.1□□□□□ -0.63
SP4-201ENST00000222584 STK11IPQ8N1F8 1099 aa11.1□□□□□ -0.63
SP4-201ENST00000222584 ZNF219Q9P2Y4 722 aaPredicted RBP11.1□□□□□ -0.63
SP4-201ENST00000222584 RILPL2Q969X0 211 aa11.09□□□□□ -0.63
SP4-201ENST00000222584 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
SP4-201ENST00000222584 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.09□□□□□ -0.63
SP4-201ENST00000222584 PHLDB1Q86UU1 1377 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms