RNA–Protein interactions for RNA: ENST00000219439.8

HSDL1-201, Transcript of hydroxysteroid dehydrogenase like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HSDL1, Length 3,519 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSDL1-201ENST00000219439 ABCC10Q5T3U5 1492 aa20.17■□□□□ 0.82
HSDL1-201ENST00000219439 SHANK2Q9UPX8 1470 aa20.16■□□□□ 0.82
HSDL1-201ENST00000219439 RGL3Q3MIN7 710 aa20.15■□□□□ 0.82
HSDL1-201ENST00000219439 SALL2Q9Y467 1007 aaPredicted RBP20.14■□□□□ 0.81
HSDL1-201ENST00000219439 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.13■□□□□ 0.815e-8■□□□□ 9.4
HSDL1-201ENST00000219439 ARHGEF12Q9NZN5 1544 aa20.12■□□□□ 0.81
HSDL1-201ENST00000219439 MYBBP1AQ9BQG0 1328 aaKnown RBP20.11■□□□□ 0.81
HSDL1-201ENST00000219439 ABCC2Q92887 1545 aa20.09■□□□□ 0.81
HSDL1-201ENST00000219439 RALBP1Q15311 655 aa20.09■□□□□ 0.81
HSDL1-201ENST00000219439 KDM5DQ9BY66 1539 aa20.07■□□□□ 0.8
HSDL1-201ENST00000219439 RNF123Q5XPI4 1314 aa20.07■□□□□ 0.8
HSDL1-201ENST00000219439 BRD4O60885 1362 aaPredicted RBP20.06■□□□□ 0.8
HSDL1-201ENST00000219439 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
HSDL1-201ENST00000219439 NBPF1Q3BBV0 1214 aa20.05■□□□□ 0.8
HSDL1-201ENST00000219439 CCDC141Q6ZP82 1450 aa20.05■□□□□ 0.8
HSDL1-201ENST00000219439 FAM135AQ9P2D6 1515 aa20.04■□□□□ 0.8
HSDL1-201ENST00000219439 BCL11AQ9H165 835 aa20.03■□□□□ 0.8
HSDL1-201ENST00000219439 LRPPRCP42704 1394 aaKnown RBP20.02■□□□□ 0.8
HSDL1-201ENST00000219439 NPM1P06748 294 aaKnown RBP eCLIP20.02■□□□□ 0.8
HSDL1-201ENST00000219439 KTN1Q86UP2 1357 aaKnown RBP20.02■□□□□ 0.8
HSDL1-201ENST00000219439 ARHGEF5Q12774 1597 aa20.02■□□□□ 0.79
HSDL1-201ENST00000219439 NLRP13Q86W25 1043 aa20.01■□□□□ 0.79
HSDL1-201ENST00000219439 SAMD9LQ8IVG5 1584 aa20■□□□□ 0.79
HSDL1-201ENST00000219439 RSPH4AQ5TD94 716 aa20■□□□□ 0.79
HSDL1-201ENST00000219439 CC2D1BQ5T0F9 858 aaKnown RBP20■□□□□ 0.79
HSDL1-201ENST00000219439 PRAG1Q86YV5 1406 aa19.99■□□□□ 0.79
HSDL1-201ENST00000219439 NOP58Q9Y2X3 529 aaKnown RBP19.98■□□□□ 0.79
HSDL1-201ENST00000219439 RRP1P56182 461 aaKnown RBP19.97■□□□□ 0.79
HSDL1-201ENST00000219439 RCAN3Q9UKA8 241 aa19.97■□□□□ 0.79
HSDL1-201ENST00000219439 SYCP2Q9BX26 1530 aa19.96■□□□□ 0.79
HSDL1-201ENST00000219439 ARHGAP5Q13017 1502 aa19.96■□□□□ 0.79
HSDL1-201ENST00000219439 ZCCHC11Q5TAX3 1644 aaKnown RBP19.96■□□□□ 0.79
HSDL1-201ENST00000219439 UHRF1BP1LA0JNW5 1464 aa19.96■□□□□ 0.79
HSDL1-201ENST00000219439 ANP32AP39687 249 aaKnown RBP19.96■□□□□ 0.79
HSDL1-201ENST00000219439 CDC42BPBQ9Y5S2 1711 aa19.95■□□□□ 0.78
HSDL1-201ENST00000219439 EXOC6Q8TAG9 804 aa19.95■□□□□ 0.78
HSDL1-201ENST00000219439 CYB5RLQ6IPT4 315 aa19.95■□□□□ 0.78
HSDL1-201ENST00000219439 PARD3Q8TEW0 1356 aa19.94■□□□□ 0.78
HSDL1-201ENST00000219439 PREX2Q70Z35 1606 aa19.93■□□□□ 0.78
HSDL1-201ENST00000219439 PAK3O75914 559 aaPredicted RBP19.93■□□□□ 0.78
HSDL1-201ENST00000219439 NBR1Q14596 966 aa19.93■□□□□ 0.78
HSDL1-201ENST00000219439 PANK3Q9H999 370 aa19.92■□□□□ 0.78
HSDL1-201ENST00000219439 E9PCH4 1651 aa19.92■□□□□ 0.78
HSDL1-201ENST00000219439 TRPM1Q7Z4N2 1603 aa19.92■□□□□ 0.78
HSDL1-201ENST00000219439 A2MP01023 1474 aa19.92■□□□□ 0.78
HSDL1-201ENST00000219439 PER1O15534 1290 aaPredicted RBP19.92■□□□□ 0.78
HSDL1-201ENST00000219439 DISP3Q9P2K9 1392 aa19.91■□□□□ 0.78
HSDL1-201ENST00000219439 CDCA7LQ96GN5 454 aa19.91■□□□□ 0.78
HSDL1-201ENST00000219439 PLA2R1Q13018 1463 aa19.91■□□□□ 0.78
HSDL1-201ENST00000219439 PLEKHH2Q8IVE3 1493 aa19.91■□□□□ 0.78
HSDL1-201ENST00000219439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.9■□□□□ 0.781e-6■■■■■ 42.9
HSDL1-201ENST00000219439 TTC37Q6PGP7 1564 aa19.89■□□□□ 0.78
HSDL1-201ENST00000219439 TMF1P82094 1093 aa19.89■□□□□ 0.77
HSDL1-201ENST00000219439 TESK2Q96S53 571 aa19.89■□□□□ 0.77
HSDL1-201ENST00000219439 PDE3BQ13370 1112 aa19.88■□□□□ 0.77
HSDL1-201ENST00000219439 EFCAB2Q5VUJ9 269 aa19.87■□□□□ 0.77
HSDL1-201ENST00000219439 NPM2Q86SE8 214 aaKnown RBP19.86■□□□□ 0.77
HSDL1-201ENST00000219439 COL17A1Q9UMD9 1497 aaPredicted RBP19.86■□□□□ 0.77
HSDL1-201ENST00000219439 GPRASP1Q5JY77 1395 aa19.86■□□□□ 0.77
HSDL1-201ENST00000219439 ERBINQ96RT1 1412 aa19.86■□□□□ 0.77
HSDL1-201ENST00000219439 IPO9Q96P70 1041 aaKnown RBP19.86■□□□□ 0.77
HSDL1-201ENST00000219439 PLIN1O60240 522 aa19.85■□□□□ 0.77
HSDL1-201ENST00000219439 ZBTB47Q9UFB7 747 aaPredicted RBP19.84■□□□□ 0.77
HSDL1-201ENST00000219439 ASXL2Q76L83 1435 aa19.84■□□□□ 0.77
HSDL1-201ENST00000219439 WDR7Q9Y4E6 1490 aa19.83■□□□□ 0.77
HSDL1-201ENST00000219439 UNC13BO14795 1591 aa19.83■□□□□ 0.77
HSDL1-201ENST00000219439 MYT1LQ9UL68 1186 aa19.83■□□□□ 0.76
HSDL1-201ENST00000219439 WASHC2CQ9Y4E1 1318 aa19.81■□□□□ 0.76
HSDL1-201ENST00000219439 PRDM15P57071 1507 aaPredicted RBP19.81■□□□□ 0.76
HSDL1-201ENST00000219439 PLCH2O75038 1416 aa19.8■□□□□ 0.76
HSDL1-201ENST00000219439 DEKP35659 375 aaKnown RBP19.8■□□□□ 0.76
HSDL1-201ENST00000219439 MAST1Q9Y2H9 1570 aa19.8■□□□□ 0.76
HSDL1-201ENST00000219439 MYO5CQ9NQX4 1742 aa19.78■□□□□ 0.76
HSDL1-201ENST00000219439 IQGAP3Q86VI3 1631 aa19.78■□□□□ 0.76
HSDL1-201ENST00000219439 TCERG1O14776 1098 aaKnown RBP19.78■□□□□ 0.76
HSDL1-201ENST00000219439 DUOX2Q9NRD8 1548 aa19.77■□□□□ 0.76
HSDL1-201ENST00000219439 KNSTRNQ9Y448 316 aa19.77■□□□□ 0.76
HSDL1-201ENST00000219439 EIF2AK4Q9P2K8 1649 aaKnown RBP19.77■□□□□ 0.75
HSDL1-201ENST00000219439 ADAMTS8Q9UP79 889 aa19.76■□□□□ 0.75
HSDL1-201ENST00000219439 AFAP1Q8N556 730 aa19.76■□□□□ 0.75
HSDL1-201ENST00000219439 PLXNC1O60486 1568 aa19.75■□□□□ 0.75
HSDL1-201ENST00000219439 CRBNQ96SW2 442 aa19.75■□□□□ 0.75
HSDL1-201ENST00000219439 PDE4AP27815 886 aa19.75■□□□□ 0.75
HSDL1-201ENST00000219439 WDR43Q15061 677 aaKnown RBP eCLIP19.75■□□□□ 0.75
HSDL1-201ENST00000219439 BLMP54132 1417 aaPredicted RBP19.74■□□□□ 0.75
HSDL1-201ENST00000219439 LAMC1P11047 1609 aa19.73■□□□□ 0.75
HSDL1-201ENST00000219439 RTL5Q5HYW3 569 aaPredicted RBP19.73■□□□□ 0.75
HSDL1-201ENST00000219439 SKAP1Q86WV1 359 aa19.71■□□□□ 0.75
HSDL1-201ENST00000219439 SPAG9O60271 1321 aaKnown RBP19.7■□□□□ 0.74
HSDL1-201ENST00000219439 TRAPPC8Q9Y2L5 1435 aa19.7■□□□□ 0.74
HSDL1-201ENST00000219439 PPP2R1AP30153 589 aa19.7■□□□□ 0.74
HSDL1-201ENST00000219439 ATP10AO60312 1499 aa19.7■□□□□ 0.74
HSDL1-201ENST00000219439 FANCAO15360 1455 aa19.69■□□□□ 0.74
HSDL1-201ENST00000219439 MAGI2Q86UL8 1455 aa19.68■□□□□ 0.74
HSDL1-201ENST00000219439 C20orf194Q5TEA3 1177 aa19.68■□□□□ 0.74
HSDL1-201ENST00000219439 BACH2Q9BYV9 841 aa19.68■□□□□ 0.74
HSDL1-201ENST00000219439 CDCA8Q53HL2 280 aa19.67■□□□□ 0.74
HSDL1-201ENST00000219439 RIMBP3CA6NJZ7 1639 aa19.66■□□□□ 0.74
HSDL1-201ENST00000219439 RIMBP3BA6NNM3 1639 aa19.66■□□□□ 0.74
HSDL1-201ENST00000219439 RIMBP3Q9UFD9 1639 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms