RNA–Protein interactions for RNA: ENST00000205636.3

CMTM6-201, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM6, Length 3,863 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-201ENST00000205636 NASPP49321 788 aaPredicted RBP18.56■□□□□ 0.56
CMTM6-201ENST00000205636 IRX3P78415 501 aaPredicted RBP18.56■□□□□ 0.56
CMTM6-201ENST00000205636 GBP4Q96PP9 640 aa18.56■□□□□ 0.56
CMTM6-201ENST00000205636 PTMAP06454 111 aaKnown RBP18.55■□□□□ 0.56
CMTM6-201ENST00000205636 EIF4G1Q04637 1599 aaKnown RBP18.55■□□□□ 0.56
CMTM6-201ENST00000205636 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.55■□□□□ 0.56
CMTM6-201ENST00000205636 HSCBQ8IWL3 235 aa18.55■□□□□ 0.56
CMTM6-201ENST00000205636 CHIC2Q9UKJ5 165 aa18.53■□□□□ 0.56
CMTM6-201ENST00000205636 PHLDB1Q86UU1 1377 aa18.53■□□□□ 0.56
CMTM6-201ENST00000205636 RRP7BPQ9NSQ0 103 aa18.53■□□□□ 0.56
CMTM6-201ENST00000205636 CCDC9Q9Y3X0 531 aaKnown RBP18.53■□□□□ 0.56
CMTM6-201ENST00000205636 CBX1P83916 185 aa18.53■□□□□ 0.56
CMTM6-201ENST00000205636 CSPP1Q1MSJ5 1256 aa18.53■□□□□ 0.56
CMTM6-201ENST00000205636 ZNF771Q7L3S4 317 aaPredicted RBP18.52■□□□□ 0.56
CMTM6-201ENST00000205636 RIPK4P57078 832 aa18.52■□□□□ 0.56
CMTM6-201ENST00000205636 DMTNQ08495 405 aa18.51■□□□□ 0.55
CMTM6-201ENST00000205636 DYNC1I1O14576 645 aa18.51■□□□□ 0.55
CMTM6-201ENST00000205636 CCDC18Q5T9S5 1454 aa18.51■□□□□ 0.55
CMTM6-201ENST00000205636 XPCQ01831 940 aaPredicted RBP18.5■□□□□ 0.55
CMTM6-201ENST00000205636 AEBP1Q8IUX7 1158 aa18.5■□□□□ 0.55
CMTM6-201ENST00000205636 UTP14CQ5TAP6 766 aaKnown RBP18.5■□□□□ 0.55
CMTM6-201ENST00000205636 C20orf194Q5TEA3 1177 aa18.5■□□□□ 0.55
CMTM6-201ENST00000205636 CGNQ9P2M7 1197 aaKnown RBP18.5■□□□□ 0.55
CMTM6-201ENST00000205636 NCOA2Q15596 1464 aa18.5■□□□□ 0.55
CMTM6-201ENST00000205636 TERF1P54274 439 aa18.49■□□□□ 0.55
CMTM6-201ENST00000205636 NCOA1Q15788 1441 aa18.49■□□□□ 0.55
CMTM6-201ENST00000205636 SKOR2Q2VWA4 1001 aaPredicted RBP18.49■□□□□ 0.55
CMTM6-201ENST00000205636 CCDC94Q9BW85 323 aaPredicted RBP18.49■□□□□ 0.55
CMTM6-201ENST00000205636 KIF20AO95235 890 aa18.48■□□□□ 0.55
CMTM6-201ENST00000205636 TBC1D2Q9BYX2 928 aa18.48■□□□□ 0.55
CMTM6-201ENST00000205636 ERICH3Q5RHP9 1530 aa18.48■□□□□ 0.55
CMTM6-201ENST00000205636 FAM193AP78312 1265 aa18.47■□□□□ 0.55
CMTM6-201ENST00000205636 UACAQ9BZF9 1416 aa18.47■□□□□ 0.55
CMTM6-201ENST00000205636 LETM1O95202 739 aaPredicted RBP18.46■□□□□ 0.55
CMTM6-201ENST00000205636 HSP90AB1P08238 724 aaKnown RBP18.46■□□□□ 0.55
CMTM6-201ENST00000205636 GTPBP4Q9BZE4 634 aaKnown RBP18.46■□□□□ 0.55
CMTM6-201ENST00000205636 TAF3Q5VWG9 929 aa18.46■□□□□ 0.55
CMTM6-201ENST00000205636 MAPK8IP3Q9UPT6 1336 aa18.46■□□□□ 0.55
CMTM6-201ENST00000205636 PTMSP20962 102 aa18.46■□□□□ 0.54
CMTM6-201ENST00000205636 MYBBP1AQ9BQG0 1328 aaKnown RBP18.45■□□□□ 0.54
CMTM6-201ENST00000205636 MAP3K1Q13233 1512 aa18.45■□□□□ 0.54
CMTM6-201ENST00000205636 RALBP1Q15311 655 aa18.44■□□□□ 0.54
CMTM6-201ENST00000205636 TOP2AP11388 1531 aaKnown RBP18.44■□□□□ 0.54
CMTM6-201ENST00000205636 DDX49Q9Y6V7 483 aaKnown RBP18.42■□□□□ 0.54
CMTM6-201ENST00000205636 SASS6Q6UVJ0 657 aa18.42■□□□□ 0.54
CMTM6-201ENST00000205636 ARHGAP35Q9NRY4 1499 aa18.41■□□□□ 0.54
CMTM6-201ENST00000205636 MFAP1P55081 439 aaKnown RBP18.41■□□□□ 0.54
CMTM6-201ENST00000205636 NLRP13Q86W25 1043 aa18.41■□□□□ 0.54
CMTM6-201ENST00000205636 FBXO3Q9UK99 471 aa18.4■□□□□ 0.54
CMTM6-201ENST00000205636 FMN1Q68DA7 1419 aa18.4■□□□□ 0.54
CMTM6-201ENST00000205636 SEC24BO95487 1268 aa18.39■□□□□ 0.53
CMTM6-201ENST00000205636 HDAC5Q9UQL6 1122 aa18.39■□□□□ 0.53
CMTM6-201ENST00000205636 KDM2BQ8NHM5 1336 aa18.39■□□□□ 0.53
CMTM6-201ENST00000205636 KIF15Q9NS87 1388 aa18.39■□□□□ 0.53
CMTM6-201ENST00000205636 BRD4O60885 1362 aaPredicted RBP18.37■□□□□ 0.53
CMTM6-201ENST00000205636 ANTXR1Q9H6X2 564 aa18.37■□□□□ 0.53
CMTM6-201ENST00000205636 WDR43Q15061 677 aaKnown RBP eCLIP18.37■□□□□ 0.53
CMTM6-201ENST00000205636 IGSF3O75054 1194 aa18.36■□□□□ 0.53
CMTM6-201ENST00000205636 FOXD4L1Q9NU39 408 aa18.36■□□□□ 0.53
CMTM6-201ENST00000205636 CERS3Q8IU89 383 aa18.36■□□□□ 0.53
CMTM6-201ENST00000205636 TMEM51Q9NW97 253 aa18.36■□□□□ 0.53
CMTM6-201ENST00000205636 GAS2L3Q86XJ1 694 aa18.34■□□□□ 0.53
CMTM6-201ENST00000205636 KCNG1Q9UIX4 513 aa18.34■□□□□ 0.53
CMTM6-201ENST00000205636 LRRC9Q6ZRR7 1453 aa18.34■□□□□ 0.53
CMTM6-201ENST00000205636 CLGNO14967 610 aa18.34■□□□□ 0.53
CMTM6-201ENST00000205636 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
CMTM6-201ENST00000205636 KIAA2012Q0VF49 1180 aa18.33■□□□□ 0.53
CMTM6-201ENST00000205636 ZSCAN20P17040 1043 aaPredicted RBP18.33■□□□□ 0.52
CMTM6-201ENST00000205636 MPHOSPH9Q99550 1183 aa18.33■□□□□ 0.52
CMTM6-201ENST00000205636 SPDYE4A6NLX3 237 aa18.32■□□□□ 0.52
CMTM6-201ENST00000205636 TNNT3P45378 269 aaPredicted RBP18.32■□□□□ 0.52
CMTM6-201ENST00000205636 C22orf23Q9BZE7 217 aa18.32■□□□□ 0.52
CMTM6-201ENST00000205636 MTUS2Q5JR59 1369 aa18.32■□□□□ 0.52
CMTM6-201ENST00000205636 KCNJ4P48050 445 aa18.31■□□□□ 0.52
CMTM6-201ENST00000205636 CHAF1AQ13111 956 aaPredicted RBP18.31■□□□□ 0.52
CMTM6-201ENST00000205636 CC2D1BQ5T0F9 858 aaKnown RBP18.31■□□□□ 0.52
CMTM6-201ENST00000205636 SYNJ1O43426 1573 aa18.3■□□□□ 0.52
CMTM6-201ENST00000205636 RGS22Q8NE09 1264 aa18.3■□□□□ 0.52
CMTM6-201ENST00000205636 TBC1D32Q96NH3 1257 aa18.3■□□□□ 0.52
CMTM6-201ENST00000205636 ROCK2O75116 1388 aaKnown RBP18.3■□□□□ 0.52
CMTM6-201ENST00000205636 SLC4A1APQ9BWU0 796 aaKnown RBP18.29■□□□□ 0.52
CMTM6-201ENST00000205636 CCDC39Q9UFE4 941 aa18.29■□□□□ 0.52
CMTM6-201ENST00000205636 HMGN5P82970 282 aaKnown RBP18.29■□□□□ 0.52
CMTM6-201ENST00000205636 CARD11Q9BXL7 1154 aa18.29■□□□□ 0.52
CMTM6-201ENST00000205636 SOX12O15370 315 aa18.28■□□□□ 0.52
CMTM6-201ENST00000205636 RNF216Q9NWF9 866 aaPredicted RBP18.28■□□□□ 0.52
CMTM6-201ENST00000205636 CCDC66A2RUB6 948 aa18.28■□□□□ 0.52
CMTM6-201ENST00000205636 PPP1R9BQ96SB3 815 aa18.28■□□□□ 0.52
CMTM6-201ENST00000205636 GOLGA2Q08379 1002 aa18.27■□□□□ 0.52
CMTM6-201ENST00000205636 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.27■□□□□ 0.52
CMTM6-201ENST00000205636 TNPO1Q92973 898 aaKnown RBP18.27■□□□□ 0.51
CMTM6-201ENST00000205636 TMED8Q6PL24 325 aaPredicted RBP18.26■□□□□ 0.51
CMTM6-201ENST00000205636 PDCL2Q8N4E4 241 aa18.26■□□□□ 0.51
CMTM6-201ENST00000205636 NOL7Q9UMY1 257 aaKnown RBP18.26■□□□□ 0.51
CMTM6-201ENST00000205636 USP47Q96K76 1375 aa18.26■□□□□ 0.51
CMTM6-201ENST00000205636 USP19O94966 1318 aa18.26■□□□□ 0.51
CMTM6-201ENST00000205636 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
CMTM6-201ENST00000205636 ZNF526Q8TF50 670 aaPredicted RBP18.25■□□□□ 0.51
CMTM6-201ENST00000205636 ZNF592Q92610 1267 aa18.25■□□□□ 0.51
CMTM6-201ENST00000205636 ZKSCAN5Q9Y2L8 839 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms