RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 CCDC141Q6ZP82 1450 aa16.02■□□□□ 0.15
TSPAN9-201ENST00000011898 CDC42BPAQ5VT25 1732 aa16.02■□□□□ 0.15
TSPAN9-201ENST00000011898 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
TSPAN9-201ENST00000011898 CARD11Q9BXL7 1154 aa16■□□□□ 0.15
TSPAN9-201ENST00000011898 HSPA5P11021 654 aaKnown RBP16■□□□□ 0.15
TSPAN9-201ENST00000011898 KIAA1107Q9UPP5 1409 aa16■□□□□ 0.15
TSPAN9-201ENST00000011898 ABCC5O15440 1437 aa16■□□□□ 0.15
TSPAN9-201ENST00000011898 PPP4R2Q9NY27 417 aa16■□□□□ 0.15
TSPAN9-201ENST00000011898 ABCA9Q8IUA7 1624 aa15.99■□□□□ 0.15
TSPAN9-201ENST00000011898 ARAP3Q8WWN8 1544 aa15.99■□□□□ 0.15
TSPAN9-201ENST00000011898 ADGRL1O94910 1474 aa15.99■□□□□ 0.15
TSPAN9-201ENST00000011898 TRIM44Q96DX7 344 aaPredicted RBP15.99■□□□□ 0.15
TSPAN9-201ENST00000011898 C9orf84Q5VXU9 1444 aa15.99■□□□□ 0.15
TSPAN9-201ENST00000011898 FOXD1Q16676 465 aa15.98■□□□□ 0.15
TSPAN9-201ENST00000011898 SCAPERQ9BY12 1400 aa15.98■□□□□ 0.15
TSPAN9-201ENST00000011898 CFAP74Q9C0B2 1584 aa15.98■□□□□ 0.15
TSPAN9-201ENST00000011898 TEX14Q8IWB6 1497 aa15.98■□□□□ 0.15
TSPAN9-201ENST00000011898 DNMT1P26358 1616 aaKnown RBP15.97■□□□□ 0.15
TSPAN9-201ENST00000011898 AKNAQ7Z591 1439 aa15.97■□□□□ 0.15
TSPAN9-201ENST00000011898 ROCK1Q13464 1354 aa15.97■□□□□ 0.15
TSPAN9-201ENST00000011898 WDR43Q15061 677 aaKnown RBP eCLIP15.97■□□□□ 0.15
TSPAN9-201ENST00000011898 SYCP2Q9BX26 1530 aa15.97■□□□□ 0.15
TSPAN9-201ENST00000011898 B4GALNT3Q6L9W6 998 aa15.97■□□□□ 0.15
TSPAN9-201ENST00000011898 AMER1Q5JTC6 1135 aaPredicted RBP15.96■□□□□ 0.15
TSPAN9-201ENST00000011898 HFM1A2PYH4 1435 aa15.95■□□□□ 0.14
TSPAN9-201ENST00000011898 PKNOX2Q96KN3 472 aa15.94■□□□□ 0.14
TSPAN9-201ENST00000011898 SAMD9LQ8IVG5 1584 aa15.94■□□□□ 0.14
TSPAN9-201ENST00000011898 SHANK2Q9UPX8 1470 aa15.94■□□□□ 0.14
TSPAN9-201ENST00000011898 CDC42BPBQ9Y5S2 1711 aa15.93■□□□□ 0.14
TSPAN9-201ENST00000011898 ARHGEF5Q12774 1597 aa15.93■□□□□ 0.14
TSPAN9-201ENST00000011898 NEO1Q92859 1461 aa15.93■□□□□ 0.14
TSPAN9-201ENST00000011898 KIF15Q9NS87 1388 aa15.93■□□□□ 0.14
TSPAN9-201ENST00000011898 AFAP1Q8N556 730 aa15.92■□□□□ 0.14
TSPAN9-201ENST00000011898 MPHOSPH9Q99550 1183 aa15.92■□□□□ 0.14
TSPAN9-201ENST00000011898 HSP90AA1P07900 732 aaKnown RBP15.92■□□□□ 0.14
TSPAN9-201ENST00000011898 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.92■□□□□ 0.14
TSPAN9-201ENST00000011898 DDRGK1Q96HY6 314 aa15.92■□□□□ 0.14
TSPAN9-201ENST00000011898 GLI2P10070 1586 aa15.91■□□□□ 0.14
TSPAN9-201ENST00000011898 DENND4BO75064 1496 aaPredicted RBP15.91■□□□□ 0.14
TSPAN9-201ENST00000011898 PTPRKQ15262 1439 aa15.91■□□□□ 0.14
TSPAN9-201ENST00000011898 ABCC1P33527 1531 aa15.9■□□□□ 0.14
TSPAN9-201ENST00000011898 NAIPQ13075 1403 aa15.89■□□□□ 0.13
TSPAN9-201ENST00000011898 UPF2Q9HAU5 1272 aaKnown RBP15.89■□□□□ 0.13
TSPAN9-201ENST00000011898 CDK11BP21127 795 aaKnown RBP15.89■□□□□ 0.13
TSPAN9-201ENST00000011898 ANKRD50Q9ULJ7 1429 aa15.89■□□□□ 0.13
TSPAN9-201ENST00000011898 ZNF518AQ6AHZ1 1483 aa15.88■□□□□ 0.13
TSPAN9-201ENST00000011898 NCOA1Q15788 1441 aa15.88■□□□□ 0.13
TSPAN9-201ENST00000011898 L3MBTL2Q969R5 705 aa15.88■□□□□ 0.13
TSPAN9-201ENST00000011898 DIP2BQ9P265 1576 aa15.87■□□□□ 0.13
TSPAN9-201ENST00000011898 MBD5Q9P267 1494 aa15.87■□□□□ 0.13
TSPAN9-201ENST00000011898 TRAPPC8Q9Y2L5 1435 aa15.87■□□□□ 0.13
TSPAN9-201ENST00000011898 DCAF11Q8TEB1 546 aa15.86■□□□□ 0.13
TSPAN9-201ENST00000011898 ADGBQ8N7X0 1667 aa15.86■□□□□ 0.13
TSPAN9-201ENST00000011898 ADGRL2O95490 1459 aa15.86■□□□□ 0.13
TSPAN9-201ENST00000011898 PODXL2Q9NZ53 605 aa15.85■□□□□ 0.13
TSPAN9-201ENST00000011898 KANK1Q14678 1352 aa15.84■□□□□ 0.13
TSPAN9-201ENST00000011898 PKD2Q13563 968 aa15.84■□□□□ 0.13
TSPAN9-201ENST00000011898 RTEL1-TNFRSF6BF6WH68 1400 aa15.84■□□□□ 0.13
TSPAN9-201ENST00000011898 A0A0U1RQG5 324 aaPredicted RBP15.84■□□□□ 0.13
TSPAN9-201ENST00000011898 RAPGEF3O95398 923 aa15.84■□□□□ 0.13
TSPAN9-201ENST00000011898 PNNQ9H307 717 aaKnown RBP15.83■□□□□ 0.12
TSPAN9-201ENST00000011898 PLEKHG5O94827 1062 aa15.83■□□□□ 0.12
TSPAN9-201ENST00000011898 POGZQ7Z3K3 1410 aa15.82■□□□□ 0.12
TSPAN9-201ENST00000011898 HSP90AA2PQ14568 343 aaPredicted RBP15.82■□□□□ 0.12
TSPAN9-201ENST00000011898 TSPOAP1O95153 1857 aa15.82■□□□□ 0.12
TSPAN9-201ENST00000011898 CROCC2H7BZ55 1655 aa15.82■□□□□ 0.12
TSPAN9-201ENST00000011898 NUP155O75694 1391 aa15.82■□□□□ 0.12
TSPAN9-201ENST00000011898 KNSTRNQ9Y448 316 aa15.82■□□□□ 0.12
TSPAN9-201ENST00000011898 MAP3K4Q9Y6R4 1608 aa15.81■□□□□ 0.12
TSPAN9-201ENST00000011898 MLECQ14165 292 aa15.81■□□□□ 0.12
TSPAN9-201ENST00000011898 GCC2Q8IWJ2 1684 aa15.8■□□□□ 0.12
TSPAN9-201ENST00000011898 ARHGEF12Q9NZN5 1544 aa15.8■□□□□ 0.12
TSPAN9-201ENST00000011898 KIF3BO15066 747 aa15.8■□□□□ 0.12
TSPAN9-201ENST00000011898 DUOX2Q9NRD8 1548 aa15.8■□□□□ 0.12
TSPAN9-201ENST00000011898 MAST1Q9Y2H9 1570 aa15.8■□□□□ 0.12
TSPAN9-201ENST00000011898 ATP7AQ04656 1500 aa15.79■□□□□ 0.12
TSPAN9-201ENST00000011898 CC2D1BQ5T0F9 858 aaKnown RBP15.79■□□□□ 0.12
TSPAN9-201ENST00000011898 ARID3AQ99856 593 aa15.78■□□□□ 0.12
TSPAN9-201ENST00000011898 RSPH6AQ9H0K4 717 aa15.78■□□□□ 0.12
TSPAN9-201ENST00000011898 ERBINQ96RT1 1412 aa15.77■□□□□ 0.11
TSPAN9-201ENST00000011898 CDCA8Q53HL2 280 aa15.75■□□□□ 0.11
TSPAN9-201ENST00000011898 IL27Q8NEV9 243 aa15.75■□□□□ 0.11
TSPAN9-201ENST00000011898 SLC24A1O60721 1099 aa15.74■□□□□ 0.11
TSPAN9-201ENST00000011898 PLXNC1O60486 1568 aa15.74■□□□□ 0.11
TSPAN9-201ENST00000011898 DHX29Q7Z478 1369 aaKnown RBP15.74■□□□□ 0.11
TSPAN9-201ENST00000011898 GGT6Q6P531 493 aa15.74■□□□□ 0.11
TSPAN9-201ENST00000011898 ZFYVE16Q7Z3T8 1539 aa15.73■□□□□ 0.11
TSPAN9-201ENST00000011898 MLH3Q9UHC1 1453 aa15.73■□□□□ 0.11
TSPAN9-201ENST00000011898 BECN1Q14457 450 aa15.72■□□□□ 0.11
TSPAN9-201ENST00000011898 HECW2Q9P2P5 1572 aa15.72■□□□□ 0.11
TSPAN9-201ENST00000011898 A2MP01023 1474 aa15.72■□□□□ 0.11
TSPAN9-201ENST00000011898 IPO9Q96P70 1041 aaKnown RBP15.71■□□□□ 0.11
TSPAN9-201ENST00000011898 DNTTIP2Q5QJE6 756 aaKnown RBP15.71■□□□□ 0.11
TSPAN9-201ENST00000011898 NCLP19338 710 aaKnown RBP15.71■□□□□ 0.1
TSPAN9-201ENST00000011898 C14orf37Q86TY3 774 aa15.7■□□□□ 0.1
TSPAN9-201ENST00000011898 FANCIQ9NVI1 1328 aa15.7■□□□□ 0.1
TSPAN9-201ENST00000011898 PRKRIP1Q9H875 184 aaPredicted RBP15.7■□□□□ 0.1
TSPAN9-201ENST00000011898 MAGI2Q86UL8 1455 aa15.69■□□□□ 0.1
TSPAN9-201ENST00000011898 TMF1P82094 1093 aa15.69■□□□□ 0.1
TSPAN9-201ENST00000011898 NEUROD2Q15784 382 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms