RNA–Protein interactions for RNA: ENSMUST00000225246.1

Ssr1-203, Transcript of Translocon-associated protein subunit alpha, mousemouse

BASIC

Gene Ssr1, Length 1,825 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1-203ENSMUST00000225246 Pabpn1Q8CCS6 302 aaKnown RBP17.66■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Fmn2Q9JL04 1578 aa17.65■□□□□ 0.42
Ssr1-203ENSMUST00000225246 Trak1Q6PD31 939 aa17.65■□□□□ 0.42
Ssr1-203ENSMUST00000225246 PtprgQ05909 1442 aa17.64■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Tubgcp6G5E8P0 1769 aa17.63■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Setd1aE9PYH6 1716 aa17.63■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Mroh2aD3Z750 1679 aa17.63■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Dot1lQ6XZL8 1540 aa17.63■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Adgrl2Q8JZZ7 1487 aa17.63■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Arhgap27A2AB59 869 aa17.63■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Ipo9Q91YE6 1041 aa17.62■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Prex2Q3LAC4 1598 aa17.6■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Upf2A2AT37 1269 aaKnown RBP17.6■□□□□ 0.41
Ssr1-203ENSMUST00000225246 TnikP83510 1323 aa17.59■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Tdrd9Q14BI7 1383 aa17.58■□□□□ 0.41
Ssr1-203ENSMUST00000225246 Ccdc27Q3V036 639 aa17.58■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Lrrc9Q8CDN9 1456 aa17.57■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Erbb3Q61526 1339 aa17.57■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Kdm5cP41230 1554 aa17.56■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Map4P27546 1125 aaKnown RBP17.56■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Neurl4Q5NCX5 1563 aa17.55■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Zcchc11B2RX14 1644 aaKnown RBP17.54■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Mast1Q9R1L5 1570 aa17.54■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Ifnlr1Q8CGK5 535 aa17.54■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Fam208aQ69ZR9 1610 aaKnown RBP17.53■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Zscan21Q07231 555 aa17.53■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Ppip5k1A2ARP1 1436 aa17.53■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Prkrip1Q9CWV6 186 aaKnown RBP17.52■□□□□ 0.4
Ssr1-203ENSMUST00000225246 Mak16Q8BGS0 296 aaKnown RBP17.51■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Rpgrip1lQ8CG73 1264 aa17.51■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Arid4bA2CG63 1314 aaKnown RBP17.51■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Grwd1Q810D6 446 aaKnown RBP17.51■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Clstn2Q9ER65 966 aa17.51■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Anp32bQ9EST5 272 aaKnown RBP17.51■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Ttc41Q692V3 1318 aa17.51■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Slc4a3P16283 1227 aa17.5■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Kcnh8P59111 1102 aa17.49■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Zfp444Q3TDV8 331 aaKnown RBP17.49■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Tarbp1E9Q368 1579 aa17.49■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Ttbk1Q6PCN3 1308 aa17.49■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Rusc2Q80U22 1514 aa17.48■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Ccdc9Q8VC31 543 aaKnown RBP17.48■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Rrbp1Q99PL5 1605 aaKnown RBP17.48■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Ssh2Q5SW75 1423 aa17.47■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Fancd2Q80V62 1450 aa17.47■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Dnmt1P13864 1620 aaKnown RBP17.46■□□□□ 0.39
Ssr1-203ENSMUST00000225246 Plch2A2AP18 1501 aa17.45■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Gm32742A0A1B0GT42 1604 aa17.44■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Tex14Q7M6U3 1450 aa17.44■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Atp7aQ64430 1491 aa17.43■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Clasp1Q80TV8 1535 aaKnown RBP17.42■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Mbd3Q9Z2D8 285 aaKnown RBP17.42■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Cd109Q8R422 1442 aa17.42■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Adamts13Q769J6 1426 aa17.41■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Sbno1Q689Z5 1390 aa17.41■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Rnf17Q99MV7 1640 aa17.4■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Pdcd11Q6NS46 1862 aaKnown RBP17.4■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Jph4Q80WT0 628 aa17.4■□□□□ 0.38
Ssr1-203ENSMUST00000225246 Cfap74Q3UY96 1578 aa17.39■□□□□ 0.37
Ssr1-203ENSMUST00000225246 PrxO55103 1391 aa17.39■□□□□ 0.37
Ssr1-203ENSMUST00000225246 NeflP08551 543 aa17.38■□□□□ 0.37
Ssr1-203ENSMUST00000225246 Zmym3Q9JLM4 1370 aa17.38■□□□□ 0.37
Ssr1-203ENSMUST00000225246 Robo2Q7TPD3 1470 aa17.38■□□□□ 0.37
Ssr1-203ENSMUST00000225246 Q7TT23 1179 aa17.37■□□□□ 0.37
Ssr1-203ENSMUST00000225246 Hecw1Q8K4P8 1604 aa17.37■□□□□ 0.37
Ssr1-203ENSMUST00000225246 Pank3Q8R2W9 370 aa17.35■□□□□ 0.37
Ssr1-203ENSMUST00000225246 Pcdh10E9PXQ7 1057 aa17.33■□□□□ 0.37
Ssr1-203ENSMUST00000225246 Hdac5Q9Z2V6 1113 aa17.33■□□□□ 0.37
Ssr1-203ENSMUST00000225246 Atf7ipQ7TT18 1306 aa17.33■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Iqcf3Q9D498 203 aa17.33■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Neo1P97798 1493 aa17.33■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Gm14025A2AP89 1413 aa17.32■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Trappc8E9PWG2 1437 aa17.32■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Zscan10Q3URR7 782 aa17.32■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Cep170Q6A065 1588 aa17.32■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Kiaa1210E9Q0C6 1637 aa17.32■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Arhgap5P97393 1501 aa17.31■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Rrp7aQ9D1C9 280 aaKnown RBP17.31■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Pola1P33609 1465 aa17.31■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Abcc3B2RX12 1523 aa17.31■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Hsp90aa1P07901 733 aaKnown RBP17.31■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Edc4Q3UJB9 1406 aaKnown RBP17.3■□□□□ 0.36
Ssr1-203ENSMUST00000225246 AnkarA2RT91 1465 aa17.3■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Prdm16A2A935 1275 aa17.29■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Ttll13A4Q9F6 804 aa17.29■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Tmf1B9EKI3 1091 aa17.29■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Inpp5dQ9ES52 1191 aa17.29■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Kdm2bQ6P1G2 1309 aa17.29■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Gm16486A0A1D5RMD1 1434 aa17.28■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Kif16bB1AVY7 1312 aa17.27■□□□□ 0.36
Ssr1-203ENSMUST00000225246 Tulp4Q9JIL5 1547 aa17.27■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Ifit1bl1D3Z6F0 470 aa17.26■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Sart1Q9Z315 806 aaKnown RBP17.26■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Ak9G3UYQ4 1894 aa17.26■□□□□ 0.35
Ssr1-203ENSMUST00000225246 PrkcshO08795 521 aa17.25■□□□□ 0.35
Ssr1-203ENSMUST00000225246 AI481877A2ALV5 1481 aa17.24■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Nkx1-2P42580 305 aa17.24■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Ppp2r1aQ76MZ3 589 aa17.24■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Plekhh1Q80TI1 1356 aa17.23■□□□□ 0.35
Ssr1-203ENSMUST00000225246 Rab3gap2Q8BMG7 1366 aa17.23■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 34.6 ms