RNA–Protein interactions for RNA: ENSMUST00000190081.6

Fam78b-206, Transcript of Protein FAM78B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Fam78b, Length 4,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fam78b-206ENSMUST00000190081 Tiam1Q60610 1591 aa19.35■□□□□ 0.69
Fam78b-206ENSMUST00000190081 Ssh1Q76I79 1042 aa19.35■□□□□ 0.69
Fam78b-206ENSMUST00000190081 Carmil1Q6EDY6 1374 aa19.35■□□□□ 0.69
Fam78b-206ENSMUST00000190081 Tpm2P58774 284 aa19.34■□□□□ 0.69
Fam78b-206ENSMUST00000190081 Tmco5bQ80X59 307 aa19.34■□□□□ 0.69
Fam78b-206ENSMUST00000190081 Pcmtd1P59913 357 aa19.32■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Pdia4P08003 638 aaKnown RBP19.32■□□□□ 0.68
Fam78b-206ENSMUST00000190081 PtprkP35822 1457 aa19.32■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Srpk2O54781 681 aaKnown RBP19.31■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Top2bQ64511 1612 aa19.31■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Nkx1-2P42580 305 aa19.31■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Zscan10Q3URR7 782 aa19.31■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Plekhg5Q66T02 1073 aa19.31■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Naip5Q9R016 1403 aa19.31■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Senp3Q9EP97 568 aaKnown RBP19.31■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Kif20aP97329 887 aa19.3■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Sptbn5F6UCX4 1208 aa19.29■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Kiaa0754Q69ZZ9 979 aa19.29■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Ncoa1P70365 1447 aa19.29■□□□□ 0.68
Fam78b-206ENSMUST00000190081 U2af1Q9D883 239 aaKnown RBP19.29■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Plekhh2Q8C115 1491 aa19.29■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Stard8Q8K031 1019 aa19.29■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Plekhh1Q80TI1 1356 aa19.28■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Srcin1Q9QWI6 1250 aa19.28■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Trim58Q5NCC9 485 aa19.27■□□□□ 0.68
Fam78b-206ENSMUST00000190081 Nup155Q99P88 1391 aaKnown RBP19.26■□□□□ 0.67
Fam78b-206ENSMUST00000190081 AqrQ8CFQ3 1481 aaKnown RBP19.26■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Mcm4P49717 862 aa19.25■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Tspyl2Q7TQI8 677 aa19.25■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Ppp1r9bQ6R891 817 aaKnown RBP19.25■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Kank1E9Q238 1360 aa19.25■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Ppp2r3aB2RXC8 1150 aa19.24■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Adam1bQ8R534 806 aa19.24■□□□□ 0.67
Fam78b-206ENSMUST00000190081 TimelessQ9R1X4 1197 aa19.23■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Smc5Q8CG46 1101 aaKnown RBP19.23■□□□□ 0.67
Fam78b-206ENSMUST00000190081 1700019A02RikA0A087WPV9 146 aa19.22■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Stk24Q99KH8 431 aa19.22■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Fam13bQ8K2H3 851 aa19.22■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Dusp27Q148W8 1138 aa19.21■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Rnf214Q8BFU3 668 aaKnown RBP19.21■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Efcab5A0JP43 1406 aa19.21■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Hsp90b1P08113 802 aaKnown RBP19.21■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Ccdc146E9Q9F7 977 aa19.21■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Trim30aP15533 496 aa19.21■□□□□ 0.67
Fam78b-206ENSMUST00000190081 Casq1O09165 405 aa19.19■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Ccar1Q8CH18 1146 aaKnown RBP19.19■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Shroom4Q1W617 1475 aa19.19■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Samd1D3YXK1 519 aa19.19■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Exosc9Q9JHI7 438 aaKnown RBP19.19■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Stk11ipQ3TAA7 1072 aa19.19■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Kif7B7ZNG0 1348 aa19.18■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Ralbp1Q62172 648 aa19.18■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Smarca4Q3TKT4 1613 aaKnown RBP19.18■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Fam184bQ0KK56 942 aa19.17■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Naip2Q9QUK4 1447 aa19.17■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Gtf2e1Q9D0D5 440 aa19.17■□□□□ 0.66
Fam78b-206ENSMUST00000190081 PtmsQ9D0J8 101 aaKnown RBP19.17■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Ncoa2Q61026 1462 aa19.16■□□□□ 0.66
Fam78b-206ENSMUST00000190081 PogkQ80TC5 607 aa19.16■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Dhx9O70133 1380 aaKnown RBP19.16■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Chmp4bQ9D8B3 224 aaKnown RBP19.15■□□□□ 0.66
Fam78b-206ENSMUST00000190081 Stag3O70576 1240 aa19.14■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Ppp2r1aQ76MZ3 589 aa19.13■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Ift140E9PY46 1464 aa19.13■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Atl3Q91YH5 541 aa19.13■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Cux2P70298 1426 aa19.13■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Fam43aQ8BUP8 424 aa19.12■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Chmp4cQ9D7F7 232 aa19.12■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Ccdc60Q8C4J0 545 aa19.12■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Gm973E9Q295 1059 aa19.11■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Erbb3Q61526 1339 aa19.11■□□□□ 0.65
Fam78b-206ENSMUST00000190081 U2surpQ6NV83 1029 aaKnown RBP19.11■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Irx6Q9ER75 438 aa19.11■□□□□ 0.65
Fam78b-206ENSMUST00000190081 3425401B19RikD3Z1D3 1412 aa19.1■□□□□ 0.65
Fam78b-206ENSMUST00000190081 Isy1Q69ZQ2 285 aaKnown RBP19.09■□□□□ 0.65
Fam78b-206ENSMUST00000190081 IqubQ8CDK3 788 aa19.08■□□□□ 0.65
Fam78b-206ENSMUST00000190081 HnrnpuQ8VEK3 800 aaKnown RBP19.08■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Cux1P53564 1515 aa19.08■□□□□ 0.64
Fam78b-206ENSMUST00000190081 BccipQ9CWI3 316 aa19.08■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Nutm1Q8BHP2 1126 aa19.07■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Plin1Q8CGN5 517 aa19.07■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Gripap1Q8VD04 806 aa19.07■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Gm7298A0A0N4SVU1 1476 aa19.07■□□□□ 0.64
Fam78b-206ENSMUST00000190081 MccE9PWI3 1003 aa19.06■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Il4rP16382 810 aa19.06■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Vgll3P85442 326 aa19.06■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Soga1E1U8D0 1418 aa19.06■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Ubap1lG3UW59 384 aa19.06■□□□□ 0.64
Fam78b-206ENSMUST00000190081 A2mQ6GQT1 1474 aa19.06■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Tsen2Q6P7W5 460 aa19.06■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Fez1Q8K0X8 392 aa19.06■□□□□ 0.64
Fam78b-206ENSMUST00000190081 CgnP59242 1191 aa19.05■□□□□ 0.64
Fam78b-206ENSMUST00000190081 RdxP26043 583 aaKnown RBP19.05■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Cog6Q8R3I3 657 aa19.05■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Nek4Q9Z1J2 792 aa19.04■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Map3k1P53349 1493 aa19.04■□□□□ 0.64
Fam78b-206ENSMUST00000190081 EprsQ8CGC7 1512 aaKnown RBP19.04■□□□□ 0.64
Fam78b-206ENSMUST00000190081 GsdmaQ9EST1 446 aa19.04■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Pcf11G3X9Z4 1553 aa19.03■□□□□ 0.64
Fam78b-206ENSMUST00000190081 Ttll5Q8CHB8 1328 aa19.02■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 16.2 ms