RNA–Protein interactions for RNA: ENSMUST00000113335.3

Ubr2-201, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ubr2, Length 5,691 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-201ENSMUST00000113335 Cspp1B2RX88 1205 aa19.36■□□□□ 0.69
Ubr2-201ENSMUST00000113335 4933402E13RikQ9D4D2 429 aa19.36■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Pank3Q8R2W9 370 aa19.36■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Ccer1Q9CQL2 403 aa19.36■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Q8BT18 775 aa19.34■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Sf3a1Q8K4Z5 791 aaKnown RBP19.34■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Tsen2Q6P7W5 460 aa19.34■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Fan1Q69ZT1 1020 aa19.33■□□□□ 0.69
Ubr2-201ENSMUST00000113335 Txndc2Q6P902 515 aa19.33■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Plekhh2Q8C115 1491 aa19.33■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Dnai2A2AC93 623 aa19.32■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Kif3bQ61771 747 aa19.32■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Cgnl1Q6AW69 1298 aa19.32■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Mre11Q61216 706 aa19.32■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Ush1cQ9ES64 910 aa19.32■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Slc4a10Q5DTL9 1118 aa19.31■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Ccdc60Q8C4J0 545 aa19.31■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Tpm3P21107 285 aaKnown RBP19.3■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Tpd52l1O54818 204 aa19.29■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Rfx1P48377 963 aa19.28■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Usp47Q8BY87 1376 aa19.28■□□□□ 0.68
Ubr2-201ENSMUST00000113335 St18Q80TY4 1045 aa19.28■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Inpp5dQ9ES52 1191 aa19.27■□□□□ 0.68
Ubr2-201ENSMUST00000113335 CenpjQ569L8 1344 aa19.27■□□□□ 0.68
Ubr2-201ENSMUST00000113335 Ggt6Q6PDE7 497 aa19.26■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Filip1lQ6P6L0 1131 aa19.26■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Casq1O09165 405 aa19.25■□□□□ 0.67
Ubr2-201ENSMUST00000113335 IbspQ61711 324 aa19.25■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Eif2s2Q99L45 331 aaKnown RBP19.24■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Rock1P70335 1354 aa19.24■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Ak7Q9D2H2 614 aa19.24■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Tomm22Q9CPQ3 142 aa19.23■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Ccnb3Q810T2 1396 aa19.23■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Nap1l3Q794H2 544 aa19.23■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Stk31Q99MW1 1018 aa19.23■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Stard8Q8K031 1019 aa19.22■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Dhx57Q6P5D3 1388 aaKnown RBP19.22■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Map7d2A2AG50 781 aa19.22■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Cc2d1aQ8K1A6 943 aa19.22■□□□□ 0.67
Ubr2-201ENSMUST00000113335 G3bp1P97855 465 aaKnown RBP19.21■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Utp3Q9JI13 469 aaKnown RBP19.21■□□□□ 0.67
Ubr2-201ENSMUST00000113335 Utp14aQ640M1 767 aaKnown RBP19.19■□□□□ 0.66
Ubr2-201ENSMUST00000113335 GsdmaQ9EST1 446 aa19.19■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Sh3bgrQ9WUZ7 214 aa19.19■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Rapgef2Q8CHG7 1496 aa19.19■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Fbxo2Q80UW2 297 aa19.19■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Kif7B7ZNG0 1348 aa19.19■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Ccdc47Q9D024 483 aaKnown RBP19.19■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Samd1D3YXK1 519 aa19.18■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Esx1O88933 382 aa19.18■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Isy1Q69ZQ2 285 aaKnown RBP19.18■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Polr3gQ6NXY9 223 aa19.17■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Drc7Q6V3W6 876 aa19.17■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Glipr1l2Q9CQ35 332 aa19.16■□□□□ 0.66
Ubr2-201ENSMUST00000113335 BccipQ9CWI3 316 aa19.16■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Sart1Q9Z315 806 aaKnown RBP19.16■□□□□ 0.66
Ubr2-201ENSMUST00000113335 UacaQ8CGB3 1411 aa19.15■□□□□ 0.66
Ubr2-201ENSMUST00000113335 HdgfP51859 237 aaKnown RBP19.15■□□□□ 0.66
Ubr2-201ENSMUST00000113335 Fam184bQ0KK56 942 aa19.14■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Pds5bQ4VA53 1446 aaKnown RBP19.14■□□□□ 0.65
Ubr2-201ENSMUST00000113335 AppP12023 770 aa19.14■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Ftsj3Q9DBE9 838 aaKnown RBP19.14■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Triml2E9PW10 424 aa19.13■□□□□ 0.65
Ubr2-201ENSMUST00000113335 PrkcshO08795 521 aa19.13■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Podxl2Q8CAE9 603 aa19.13■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Usp40Q8BWR4 1235 aa19.13■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Pknox2Q8BG99 474 aa19.13■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Arid4aF8VPQ2 1261 aaKnown RBP19.12■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Carmil1Q6EDY6 1374 aa19.12■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Gm21969J3QJZ1 289 aa19.12■□□□□ 0.65
Ubr2-201ENSMUST00000113335 KinQ8K339 391 aa19.12■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Kif4P33174 1231 aa19.12■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Ralbp1Q62172 648 aa19.12■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Rabep1O35551 862 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Vps53Q8CCB4 832 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Gripap1Q8VD04 806 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Phactr2B1AVP0 632 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Trim58Q5NCC9 485 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Cabp4Q8VHC5 271 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Tpm1P58771 284 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Gabpb2P81069 414 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Chmp4cQ9D7F7 232 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Ap3b2Q9JME5 1082 aa19.11■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Kif16bB1AVY7 1312 aa19.1■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Ubap1lG3UW59 384 aa19.09■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Zscan10Q3URR7 782 aa19.09■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Pak3Q61036 559 aa19.09■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Bicd2Q921C5 820 aa19.09■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Srek1Q8BZX4 494 aaKnown RBP19.08■□□□□ 0.65
Ubr2-201ENSMUST00000113335 Dapk1Q80YE7 1442 aa19.08■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Taf3Q5HZG4 932 aa19.07■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Tceal9Q9DD24 104 aa19.07■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Cux2P70298 1426 aa19.07■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Tpm2P58774 284 aa19.07■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Kri1Q8VDQ9 704 aaKnown RBP19.07■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Krt82Q99M74 516 aa19.06■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Tpm4Q6IRU2 248 aa19.06■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Mink1Q9JM52 1308 aa19.04■□□□□ 0.64
Ubr2-201ENSMUST00000113335 KarsQ99MN1 595 aaKnown RBP19.04■□□□□ 0.64
Ubr2-201ENSMUST00000113335 Fam193aQ8CGI1 1231 aaKnown RBP19.04■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 36.1 ms