RNA–Protein interactions for RNA: ENSMUST00000111043.8

Bdnf-203, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,839 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-203ENSMUST00000111043 4933416C03RikQ3V063 378 aa10.23□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Lrrc9Q8CDN9 1456 aa10.23□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Caskin1Q6P9K8 1431 aa10.23□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Ankrd36D3Z4K0 1415 aa10.21□□□□□ -0.77
Bdnf-203ENSMUST00000111043 Cul7Q8VE73 1689 aa10.21□□□□□ -0.78
Bdnf-203ENSMUST00000111043 AI481877A2ALV5 1481 aa10.21□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Rfx7F8VPJ6 1459 aa10.21□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Supt16hQ920B9 1047 aa10.2□□□□□ -0.78
Bdnf-203ENSMUST00000111043 NhsB1AV60 1647 aa10.2□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Ssh2Q5SW75 1423 aa10.2□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Fam208aQ69ZR9 1610 aaKnown RBP10.2□□□□□ -0.78
Bdnf-203ENSMUST00000111043 AlkP97793 1621 aa10.2□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Pde4cQ3UEI1 686 aa10.2□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Clstn2Q9ER65 966 aa10.19□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Ccdc27Q3V036 639 aa10.19□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Ncbp3Q8BZR9 615 aaKnown RBP10.18□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Stk24Q99KH8 431 aa10.18□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Adgrl3Q80TS3 1537 aa10.17□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Nolc1E9Q5C9 702 aaKnown RBP10.16□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Os9Q8K2C7 672 aa10.16□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Kdm2aP59997 1161 aa10.16□□□□□ -0.78
Bdnf-203ENSMUST00000111043 Sall3Q62255 1320 aa10.15□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Abca8bQ8K440 1620 aa10.15□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Znf710Q3U288 666 aa10.14□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Prdm16A2A935 1275 aa10.14□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Cd109Q8R422 1442 aa10.14□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Mroh3A0A1D5RM54 893 aa10.14□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Naip5Q9R016 1403 aa10.13□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Gm13697A2AK42 830 aa10.13□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Ptch1Q61115 1434 aa10.13□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Depdc5P61460 1591 aa10.13□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Gm32742A0A1B0GT42 1604 aa10.13□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Ifit1bl1D3Z6F0 470 aa10.13□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Hsp90aa1P07901 733 aaKnown RBP10.12□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Rundc1Q0VDN7 615 aa10.12□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Zfyve16Q80U44 1528 aa10.12□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Supt6hQ62383 1726 aaKnown RBP10.11□□□□□ -0.79
Bdnf-203ENSMUST00000111043 NeflP08551 543 aa10.11□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Rnf17Q99MV7 1640 aa10.11□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Ak9G3UYQ4 1894 aa10.1□□□□□ -0.79
Bdnf-203ENSMUST00000111043 DaxxO35613 739 aa10.1□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Rprd2Q6NXI6 1469 aaKnown RBP10.09□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Upf2A2AT37 1269 aaKnown RBP10.09□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Card11Q8CIS0 1159 aa10.09□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Cdc42bpbQ7TT50 1713 aa10.09□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Mrs2Q5NCE8 434 aa10.09□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Fmn2Q9JL04 1578 aa10.09□□□□□ -0.79
Bdnf-203ENSMUST00000111043 Washc2Q6PGL7 1334 aa10.08□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Dnajc5gQ8C632 165 aa10.08□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Cfap74Q3UY96 1578 aa10.08□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Abcc3B2RX12 1523 aa10.08□□□□□ -0.8
Bdnf-203ENSMUST00000111043 OvosQ3UU35 1456 aa10.08□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Atp7aQ64430 1491 aa10.07□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Kidins220E9Q9B7 1793 aa10.07□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Adgrl2Q8JZZ7 1487 aa10.07□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Irx3P81067 507 aa10.07□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Prdm10Q3UTQ7 1184 aa10.07□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Atp1b4Q99ME6 356 aa10.07□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Asxl1P59598 1514 aa10.06□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Col17a1Q07563 1470 aa10.06□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Afap1Q80YS6 731 aa10.06□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Abca9Q8K449 1623 aa10.05□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Dapk1Q80YE7 1442 aa10.05□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Pik3c2gO70167 1506 aa10.05□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Myom3A2ABU4 1439 aa10.04□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Yeats2Q3TUF7 1407 aa10.04□□□□□ -0.8
Bdnf-203ENSMUST00000111043 P3h3Q8CG70 732 aa10.04□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Hdac5Q9Z2V6 1113 aa10.04□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Kiaa1210E9Q0C6 1637 aa10.04□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Anp32bQ9EST5 272 aaKnown RBP10.03□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Ttc21bQ0HA38 1315 aa10.03□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Kif14L0N7N1 1674 aaKnown RBP10.03□□□□□ -0.8
Bdnf-203ENSMUST00000111043 Usp54Q8BL06 1588 aaKnown RBP10.02□□□□□ -0.81
Bdnf-203ENSMUST00000111043 PtprgQ05909 1442 aa10.02□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Fhod3Q76LL6 1578 aa10.01□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Setbp1Q9Z180 1582 aa10.01□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Trpm2Q91YD4 1506 aa10.01□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Fan1Q69ZT1 1020 aa10.01□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Pdcd11Q6NS46 1862 aaKnown RBP10.01□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Gm20521D3Z5F7 333 aa10□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Znf316Q6PGE4 1016 aa10□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Safb2Q80YR5 991 aaKnown RBP10□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Pprc1Q6NZN1 1644 aa10□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Smg6P61406 1418 aaKnown RBP9.99□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Gtf3c3Q3TMP1 882 aa9.99□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Nsd2Q8BVE8 1365 aa9.99□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Ipo9Q91YE6 1041 aa9.99□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Nos1Q9Z0J4 1429 aa9.99□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Tarbp1E9Q368 1579 aa9.98□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Wwc2Q6NXJ0 1187 aa9.98□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Pcdh10E9PXQ7 1057 aa9.98□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Cdk13Q69ZA1 1511 aaKnown RBP9.98□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Srpk2O54781 681 aaKnown RBP9.98□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Cfap65Q3V0B4 1847 aa9.97□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Naip6Q9JIB6 1403 aa9.97□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Gli2Q0VGT2 1544 aa9.97□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Tcerg1Q8CGF7 1100 aaKnown RBP9.97□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Mug2P28666 1451 aa9.97□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Edc4Q3UJB9 1406 aaKnown RBP9.97□□□□□ -0.81
Bdnf-203ENSMUST00000111043 Stk26Q99JT2 416 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 20.9 ms