RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Ksr2Q3UVC0 959 aa13.17□□□□□ -0.3
Vcan-202ENSMUST00000109544 Ralbp1Q62172 648 aa13.17□□□□□ -0.3
Vcan-202ENSMUST00000109544 Brpf1B2RRD7 1212 aa13.17□□□□□ -0.3
Vcan-202ENSMUST00000109544 KinQ8K339 391 aa13.16□□□□□ -0.3
Vcan-202ENSMUST00000109544 Cplx2P84086 134 aa13.15□□□□□ -0.3
Vcan-202ENSMUST00000109544 Pdcl3Q8BVF2 240 aa13.15□□□□□ -0.3
Vcan-202ENSMUST00000109544 CalrP14211 416 aaKnown RBP13.15□□□□□ -0.3
Vcan-202ENSMUST00000109544 Kif4P33174 1231 aa13.15□□□□□ -0.3
Vcan-202ENSMUST00000109544 Rsph4aQ8BYM7 716 aa13.15□□□□□ -0.3
Vcan-202ENSMUST00000109544 Kif16bB1AVY7 1312 aa13.15□□□□□ -0.3
Vcan-202ENSMUST00000109544 ChgaP26339 463 aaKnown RBP13.15□□□□□ -0.3
Vcan-202ENSMUST00000109544 HdgfP51859 237 aaKnown RBP13.15□□□□□ -0.3
Vcan-202ENSMUST00000109544 Cep162Q6ZQ06 1403 aa13.14□□□□□ -0.31
Vcan-202ENSMUST00000109544 Gm21969J3QJZ1 289 aa13.14□□□□□ -0.31
Vcan-202ENSMUST00000109544 EzrP26040 586 aaKnown RBP13.14□□□□□ -0.31
Vcan-202ENSMUST00000109544 Hook1Q8BIL5 728 aa13.14□□□□□ -0.31
Vcan-202ENSMUST00000109544 Srcin1Q9QWI6 1250 aa13.14□□□□□ -0.31
Vcan-202ENSMUST00000109544 Kif3aP28741 701 aa13.14□□□□□ -0.31
Vcan-202ENSMUST00000109544 Gripap1Q8VD04 806 aa13.14□□□□□ -0.31
Vcan-202ENSMUST00000109544 Kif3cO35066 796 aa13.13□□□□□ -0.31
Vcan-202ENSMUST00000109544 Dhx57Q6P5D3 1388 aaKnown RBP13.13□□□□□ -0.31
Vcan-202ENSMUST00000109544 Znf330Q922H9 316 aa13.13□□□□□ -0.31
Vcan-202ENSMUST00000109544 Znhit6Q3UFB2 460 aaKnown RBP13.13□□□□□ -0.31
Vcan-202ENSMUST00000109544 Nolc1E9Q5C9 702 aaKnown RBP13.12□□□□□ -0.31
Vcan-202ENSMUST00000109544 Cwc15Q9JHS9 229 aaKnown RBP13.12□□□□□ -0.31
Vcan-202ENSMUST00000109544 Sin3aQ60520 1274 aaKnown RBP13.12□□□□□ -0.31
Vcan-202ENSMUST00000109544 Anp32eP97822 260 aaKnown RBP13.12□□□□□ -0.31
Vcan-202ENSMUST00000109544 Gabpb2P81069 414 aa13.12□□□□□ -0.31
Vcan-202ENSMUST00000109544 Smg6P61406 1418 aaKnown RBP13.12□□□□□ -0.31
Vcan-202ENSMUST00000109544 CrbnQ8C7D2 445 aa13.12□□□□□ -0.31
Vcan-202ENSMUST00000109544 NaspQ99MD9 773 aaKnown RBP13.12□□□□□ -0.31
Vcan-202ENSMUST00000109544 Chaf1aQ9QWF0 911 aa13.12□□□□□ -0.31
Vcan-202ENSMUST00000109544 Noc3lQ8VI84 807 aaKnown RBP13.11□□□□□ -0.31
Vcan-202ENSMUST00000109544 Trak1Q6PD31 939 aa13.11□□□□□ -0.31
Vcan-202ENSMUST00000109544 Rab11fip3Q8CHD8 1047 aa13.11□□□□□ -0.31
Vcan-202ENSMUST00000109544 Rabep1O35551 862 aa13.1□□□□□ -0.31
Vcan-202ENSMUST00000109544 CenpjQ569L8 1344 aa13.1□□□□□ -0.31
Vcan-202ENSMUST00000109544 Gprasp1Q5U4C1 1347 aa13.1□□□□□ -0.31
Vcan-202ENSMUST00000109544 Utp3Q9JI13 469 aaKnown RBP13.1□□□□□ -0.31
Vcan-202ENSMUST00000109544 Birc3O08863 600 aa13.1□□□□□ -0.31
Vcan-202ENSMUST00000109544 Ccdc146E9Q9F7 977 aa13.09□□□□□ -0.31
Vcan-202ENSMUST00000109544 Rufy1Q8BIJ7 712 aa13.09□□□□□ -0.31
Vcan-202ENSMUST00000109544 Chmp3Q9CQ10 224 aa13.09□□□□□ -0.31
Vcan-202ENSMUST00000109544 Fmn1Q05860 1466 aa13.09□□□□□ -0.31
Vcan-202ENSMUST00000109544 Atl3Q91YH5 541 aa13.08□□□□□ -0.31
Vcan-202ENSMUST00000109544 Odf2A3KGV1 830 aaKnown RBP13.08□□□□□ -0.32
Vcan-202ENSMUST00000109544 Aebp1Q640N1 1128 aa13.08□□□□□ -0.32
Vcan-202ENSMUST00000109544 Ciz1Q8VEH2 845 aa13.08□□□□□ -0.32
Vcan-202ENSMUST00000109544 Gcom1E9PZ54 550 aa13.07□□□□□ -0.32
Vcan-202ENSMUST00000109544 MyzapQ3UIJ9 466 aa13.07□□□□□ -0.32
Vcan-202ENSMUST00000109544 Dhx8A2A4P0 1244 aaKnown RBP13.07□□□□□ -0.32
Vcan-202ENSMUST00000109544 Kri1Q8VDQ9 704 aaKnown RBP13.07□□□□□ -0.32
Vcan-202ENSMUST00000109544 Rock1P70335 1354 aa13.07□□□□□ -0.32
Vcan-202ENSMUST00000109544 Rnf20Q5DTM8 973 aa13.07□□□□□ -0.32
Vcan-202ENSMUST00000109544 Dctn1O08788 1281 aa13.07□□□□□ -0.32
Vcan-202ENSMUST00000109544 Kif7B7ZNG0 1348 aa13.06□□□□□ -0.32
Vcan-202ENSMUST00000109544 Nup155Q99P88 1391 aaKnown RBP13.06□□□□□ -0.32
Vcan-202ENSMUST00000109544 Ddx11Q6AXC6 880 aa13.06□□□□□ -0.32
Vcan-202ENSMUST00000109544 Hap1O35668 628 aa13.06□□□□□ -0.32
Vcan-202ENSMUST00000109544 Tnnt1O88346 262 aa13.06□□□□□ -0.32
Vcan-202ENSMUST00000109544 Smc4Q8CG47 1286 aa13.06□□□□□ -0.32
Vcan-202ENSMUST00000109544 Rrp9Q91WM3 475 aaKnown RBP13.06□□□□□ -0.32
Vcan-202ENSMUST00000109544 Stk26Q99JT2 416 aa13.06□□□□□ -0.32
Vcan-202ENSMUST00000109544 Rec8Q8C5S7 591 aa13.05□□□□□ -0.32
Vcan-202ENSMUST00000109544 Tomm22Q9CPQ3 142 aa13.05□□□□□ -0.32
Vcan-202ENSMUST00000109544 Isy1Q69ZQ2 285 aaKnown RBP13.05□□□□□ -0.32
Vcan-202ENSMUST00000109544 Stk31Q99MW1 1018 aa13.05□□□□□ -0.32
Vcan-202ENSMUST00000109544 Lemd3Q9WU40 921 aa13.05□□□□□ -0.32
Vcan-202ENSMUST00000109544 UacaQ8CGB3 1411 aa13.05□□□□□ -0.32
Vcan-202ENSMUST00000109544 Trim58Q5NCC9 485 aa13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 Necab1Q8BG18 352 aa13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 Cabp1Q9JLK7 227 aa13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 Plin1Q8CGN5 517 aa13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 Plekhh2Q8C115 1491 aa13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 MyclP10166 368 aa13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 Drc7Q6V3W6 876 aa13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 Ubxn4Q8VCH8 506 aa13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 Bicd2Q921C5 820 aa13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 PhaxQ9JJT9 385 aaKnown RBP13.04□□□□□ -0.32
Vcan-202ENSMUST00000109544 Tsen2Q6P7W5 460 aa13.03□□□□□ -0.32
Vcan-202ENSMUST00000109544 Slc4a1apE9PX68 744 aa13.03□□□□□ -0.32
Vcan-202ENSMUST00000109544 Cetn4Q8K4K1 168 aa13.03□□□□□ -0.32
Vcan-202ENSMUST00000109544 Pds5bQ4VA53 1446 aaKnown RBP13.03□□□□□ -0.32
Vcan-202ENSMUST00000109544 G3bp1P97855 465 aaKnown RBP13.03□□□□□ -0.32
Vcan-202ENSMUST00000109544 Wdr78E9PYY5 807 aa13.02□□□□□ -0.32
Vcan-202ENSMUST00000109544 Cchcr1Q8K2I2 770 aa13.02□□□□□ -0.32
Vcan-202ENSMUST00000109544 Ccdc60Q8C4J0 545 aa13.02□□□□□ -0.33
Vcan-202ENSMUST00000109544 Slc4a10Q5DTL9 1118 aa13.02□□□□□ -0.33
Vcan-202ENSMUST00000109544 Gpatch3Q8BIY1 525 aa13.02□□□□□ -0.33
Vcan-202ENSMUST00000109544 Ak7Q9D2H2 614 aa13.02□□□□□ -0.33
Vcan-202ENSMUST00000109544 Chmp4cQ9D7F7 232 aa13.02□□□□□ -0.33
Vcan-202ENSMUST00000109544 Krt82Q99M74 516 aa13.01□□□□□ -0.33
Vcan-202ENSMUST00000109544 Mns1Q61884 491 aa13.01□□□□□ -0.33
Vcan-202ENSMUST00000109544 Smc3Q9CW03 1217 aaKnown RBP13.01□□□□□ -0.33
Vcan-202ENSMUST00000109544 Ppm1eQ80TL0 749 aa13.01□□□□□ -0.33
Vcan-202ENSMUST00000109544 Psme1P97371 249 aa13□□□□□ -0.33
Vcan-202ENSMUST00000109544 Pnmal2G3X9N3 661 aa13□□□□□ -0.33
Vcan-202ENSMUST00000109544 Cplx1P63040 134 aa13□□□□□ -0.33
Vcan-202ENSMUST00000109544 Dixdc1Q80Y83 711 aa13□□□□□ -0.33
Vcan-202ENSMUST00000109544 Mical1Q8VDP3 1048 aa13□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms