RNA–Protein interactions for RNA: ENSMUST00000109544.8

Vcan-202, Transcript of Versican core protein, mousemouse

TSL 5 BASIC

Gene Vcan, Length 5,702 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-202ENSMUST00000109544 Rhox8Q6VSS7 320 aa18.41■□□□□ 0.54
Vcan-202ENSMUST00000109544 Rpgrip1Q9EPQ2 1331 aa17.8■□□□□ 0.44
Vcan-202ENSMUST00000109544 Cngb1E1AZ71 1325 aa17.36■□□□□ 0.37
Vcan-202ENSMUST00000109544 Las1lA2BE28 776 aaKnown RBP17.28■□□□□ 0.36
Vcan-202ENSMUST00000109544 Pelp1Q9DBD5 1123 aaKnown RBP17.03■□□□□ 0.32
Vcan-202ENSMUST00000109544 Wdr66E9Q743 1299 aa16.57■□□□□ 0.24
Vcan-202ENSMUST00000109544 Ehmt2Q9Z148 1263 aaKnown RBP16.53■□□□□ 0.24
Vcan-202ENSMUST00000109544 CenpbP27790 599 aa16.32■□□□□ 0.2
Vcan-202ENSMUST00000109544 Zeb1Q64318 1117 aa16.26■□□□□ 0.19
Vcan-202ENSMUST00000109544 Ube2uB1AUC4 352 aa16.23■□□□□ 0.19
Vcan-202ENSMUST00000109544 Esf1Q3V1V3 845 aaKnown RBP16.17■□□□□ 0.18
Vcan-202ENSMUST00000109544 Amer1Q7TS75 1132 aa16.15■□□□□ 0.18
Vcan-202ENSMUST00000109544 Stra8P70278 393 aa16.13■□□□□ 0.17
Vcan-202ENSMUST00000109544 Ccdc136Q3TVA9 1136 aa16.09■□□□□ 0.17
Vcan-202ENSMUST00000109544 Trim41Q5NCC3 630 aa16.08■□□□□ 0.17
Vcan-202ENSMUST00000109544 Myt1Q8CFC2 1127 aa16.04■□□□□ 0.16
Vcan-202ENSMUST00000109544 NefmP08553 848 aa16.04■□□□□ 0.16
Vcan-202ENSMUST00000109544 Acin1Q9JIX8 1338 aaKnown RBP16■□□□□ 0.15
Vcan-202ENSMUST00000109544 Npm2Q80W85 207 aa15.96■□□□□ 0.15
Vcan-202ENSMUST00000109544 Gab3Q8BSM5 595 aa15.94■□□□□ 0.14
Vcan-202ENSMUST00000109544 4930567H17RikQ3V0K5 233 aa15.88■□□□□ 0.13
Vcan-202ENSMUST00000109544 Myt1lP97500 1187 aa15.74■□□□□ 0.11
Vcan-202ENSMUST00000109544 Tnnt3Q9QZ47 272 aa15.67■□□□□ 0.1
Vcan-202ENSMUST00000109544 Cdk11bP24788 784 aaKnown RBP15.64■□□□□ 0.09
Vcan-202ENSMUST00000109544 UbtfP25976 765 aaKnown RBP15.54■□□□□ 0.08
Vcan-202ENSMUST00000109544 4933416C03RikQ3V063 378 aa15.52■□□□□ 0.08
Vcan-202ENSMUST00000109544 Rtl5Q5DTT4 599 aa15.52■□□□□ 0.08
Vcan-202ENSMUST00000109544 Anp32bQ9EST5 272 aaKnown RBP15.5■□□□□ 0.07
Vcan-202ENSMUST00000109544 Slc24a1Q91WD8 1130 aa15.5■□□□□ 0.07
Vcan-202ENSMUST00000109544 Ccdc180J3QNE4 1664 aa15.48■□□□□ 0.07
Vcan-202ENSMUST00000109544 HrcG5E8J6 738 aa15.48■□□□□ 0.07
Vcan-202ENSMUST00000109544 NrdcQ8BHG1 1161 aa15.44■□□□□ 0.06
Vcan-202ENSMUST00000109544 NeflP08551 543 aa15.43■□□□□ 0.06
Vcan-202ENSMUST00000109544 Pcgf6Q99NA9 353 aa15.4■□□□□ 0.06
Vcan-202ENSMUST00000109544 NischQ80TM9 1593 aa15.39■□□□□ 0.05
Vcan-202ENSMUST00000109544 Ttbk1Q6PCN3 1308 aa15.37■□□□□ 0.05
Vcan-202ENSMUST00000109544 Nop58Q6DFW4 536 aaKnown RBP15.37■□□□□ 0.05
Vcan-202ENSMUST00000109544 Rtl1Q7M732 1744 aa15.27■□□□□ 0.04
Vcan-202ENSMUST00000109544 NclP09405 707 aaKnown RBP15.19■□□□□ 0.02
Vcan-202ENSMUST00000109544 Eif5bQ05D44 1216 aaKnown RBP15.1■□□□□ 0.01
Vcan-202ENSMUST00000109544 TonslQ6NZL6 1363 aa15.08■□□□□ 0
Vcan-202ENSMUST00000109544 Fam50aQ9WV03 339 aaKnown RBP15.06■□□□□ 0
Vcan-202ENSMUST00000109544 DiexfQ8BTT6 772 aaKnown RBP15.03■□□□□ -0
Vcan-202ENSMUST00000109544 Anp32aO35381 247 aa15.01□□□□□ -0.01
Vcan-202ENSMUST00000109544 Supt5hO55201 1082 aaKnown RBP14.98□□□□□ -0.01
Vcan-202ENSMUST00000109544 Neurod1Q60867 357 aa14.98□□□□□ -0.01
Vcan-202ENSMUST00000109544 Os9Q8K2C7 672 aa14.98□□□□□ -0.01
Vcan-202ENSMUST00000109544 Il27Q8K3I6 234 aa14.92□□□□□ -0.02
Vcan-202ENSMUST00000109544 ClspnQ80YR7 1315 aa14.87□□□□□ -0.03
Vcan-202ENSMUST00000109544 DaxxO35613 739 aa14.85□□□□□ -0.03
Vcan-202ENSMUST00000109544 Ap3b1Q9Z1T1 1105 aa14.82□□□□□ -0.04
Vcan-202ENSMUST00000109544 Mier1Q5UAK0 511 aa14.78□□□□□ -0.04
Vcan-202ENSMUST00000109544 Ppargc1bQ8VHJ7 1014 aa14.73□□□□□ -0.05
Vcan-202ENSMUST00000109544 Hdac5Q9Z2V6 1113 aa14.68□□□□□ -0.06
Vcan-202ENSMUST00000109544 Ccdc9Q8VC31 543 aaKnown RBP14.67□□□□□ -0.06
Vcan-202ENSMUST00000109544 Zcchc6Q5BLK4 1491 aaKnown RBP14.67□□□□□ -0.06
Vcan-202ENSMUST00000109544 Aplp2Q06335 707 aa14.65□□□□□ -0.06
Vcan-202ENSMUST00000109544 Anks4bQ8K3X6 423 aa14.64□□□□□ -0.07
Vcan-202ENSMUST00000109544 Upf2A2AT37 1269 aaKnown RBP14.58□□□□□ -0.08
Vcan-202ENSMUST00000109544 Nlrp6Q91WS2 869 aa14.57□□□□□ -0.08
Vcan-202ENSMUST00000109544 Ythdc1E9Q5K9 736 aaKnown RBP14.56□□□□□ -0.08
Vcan-202ENSMUST00000109544 Abcc9P70170 1546 aa14.54□□□□□ -0.08
Vcan-202ENSMUST00000109544 Ccer2J3QPU5 274 aa14.52□□□□□ -0.08
Vcan-202ENSMUST00000109544 CatipB9EKE5 520 aa14.47□□□□□ -0.09
Vcan-202ENSMUST00000109544 Calr4Q3TQS0 420 aa14.44□□□□□ -0.1
Vcan-202ENSMUST00000109544 Hnrnpul2Q00PI9 745 aaKnown RBP14.41□□□□□ -0.1
Vcan-202ENSMUST00000109544 Hsp90aa1P07901 733 aaKnown RBP14.41□□□□□ -0.1
Vcan-202ENSMUST00000109544 Lmod2Q3UHZ5 550 aa14.4□□□□□ -0.1
Vcan-202ENSMUST00000109544 Plekhg3Q4VAC9 1341 aa14.4□□□□□ -0.1
Vcan-202ENSMUST00000109544 Npm1Q61937 292 aaKnown RBP14.39□□□□□ -0.11
Vcan-202ENSMUST00000109544 Polr3glQ8R0C0 218 aa14.38□□□□□ -0.11
Vcan-202ENSMUST00000109544 Dcaf1Q80TR8 1506 aa14.38□□□□□ -0.11
Vcan-202ENSMUST00000109544 Csrnp3P59055 597 aa14.38□□□□□ -0.11
Vcan-202ENSMUST00000109544 Gm13697A2AK42 830 aa14.37□□□□□ -0.11
Vcan-202ENSMUST00000109544 Ppp4r2Q0VGB7 417 aa14.35□□□□□ -0.11
Vcan-202ENSMUST00000109544 Wdr43Q6ZQL4 677 aaKnown RBP14.35□□□□□ -0.11
Vcan-202ENSMUST00000109544 Sall2Q9QX96 1004 aa14.35□□□□□ -0.11
Vcan-202ENSMUST00000109544 Zbtb7cQ8VCZ7 619 aa14.32□□□□□ -0.12
Vcan-202ENSMUST00000109544 ArxO35085 564 aa14.29□□□□□ -0.12
Vcan-202ENSMUST00000109544 Trim44Q9QXA7 346 aa14.28□□□□□ -0.12
Vcan-202ENSMUST00000109544 Clip1Q922J3 1391 aa14.26□□□□□ -0.13
Vcan-202ENSMUST00000109544 Erich6D3Z6S9 713 aa14.26□□□□□ -0.13
Vcan-202ENSMUST00000109544 Atp1b4Q99ME6 356 aa14.25□□□□□ -0.13
Vcan-202ENSMUST00000109544 Cep164Q5DU05 1446 aa14.23□□□□□ -0.13
Vcan-202ENSMUST00000109544 Gm38655A0A286YDK6 273 aa14.23□□□□□ -0.13
Vcan-202ENSMUST00000109544 Chic1Q8CBW7 227 aa14.22□□□□□ -0.13
Vcan-202ENSMUST00000109544 Zbtb4Q5F293 982 aa14.2□□□□□ -0.14
Vcan-202ENSMUST00000109544 Mapk8ip2Q9ERE9 830 aa14.2□□□□□ -0.14
Vcan-202ENSMUST00000109544 Eid3Q3V124 375 aa14.19□□□□□ -0.14
Vcan-202ENSMUST00000109544 DekQ7TNV0 380 aaKnown RBP14.18□□□□□ -0.14
Vcan-202ENSMUST00000109544 Mrs2Q5NCE8 434 aa14.16□□□□□ -0.14
Vcan-202ENSMUST00000109544 Lmod3E9QA62 571 aa14.16□□□□□ -0.14
Vcan-202ENSMUST00000109544 Htatsf1Q8BGC0 757 aa14.16□□□□□ -0.14
Vcan-202ENSMUST00000109544 Brd4Q9ESU6 1400 aaKnown RBP14.15□□□□□ -0.14
Vcan-202ENSMUST00000109544 Gm13695A2AK44 830 aa14.15□□□□□ -0.14
Vcan-202ENSMUST00000109544 Clstn2Q9ER65 966 aa14.15□□□□□ -0.14
Vcan-202ENSMUST00000109544 Gm35339A0A140LHH9 1649 aa14.14□□□□□ -0.15
Vcan-202ENSMUST00000109544 CanxP35564 591 aaKnown RBP14.13□□□□□ -0.15
Vcan-202ENSMUST00000109544 Ccdc27Q3V036 639 aa14.12□□□□□ -0.15
Vcan-202ENSMUST00000109544 Prdm10Q3UTQ7 1184 aa14.11□□□□□ -0.15
Retrieved 100 of 22,080 RNA–protein pairs in 58.4 ms