RNA–Protein interactions for RNA: ENSMUST00000078886.9

Spen-201, Transcript of Msx2-interacting protein, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Spen, Length 12,082 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Spen-201ENSMUST00000078886 MecomP14404 1042 aa10.06□□□□□ -0.8
Spen-201ENSMUST00000078886 Chaf1aQ9QWF0 911 aa10.06□□□□□ -0.8
Spen-201ENSMUST00000078886 U2af1Q9D883 239 aaKnown RBP10.05□□□□□ -0.8
Spen-201ENSMUST00000078886 Rrp9Q91WM3 475 aaKnown RBP10.05□□□□□ -0.8
Spen-201ENSMUST00000078886 Dnai2A2AC93 623 aa10.05□□□□□ -0.8
Spen-201ENSMUST00000078886 Mre11Q61216 706 aa10.04□□□□□ -0.8
Spen-201ENSMUST00000078886 Dixdc1Q80Y83 711 aa10.04□□□□□ -0.8
Spen-201ENSMUST00000078886 Glipr1l2Q9CQ35 332 aa10.04□□□□□ -0.8
Spen-201ENSMUST00000078886 Tpm2P58774 284 aa10.04□□□□□ -0.8
Spen-201ENSMUST00000078886 Ncbp3Q8BZR9 615 aaKnown RBP10.04□□□□□ -0.8
Spen-201ENSMUST00000078886 Znf330Q922H9 316 aa10.04□□□□□ -0.8
Spen-201ENSMUST00000078886 Paf1Q8K2T8 535 aa10.04□□□□□ -0.8
Spen-201ENSMUST00000078886 Gps2Q921N8 327 aa10.04□□□□□ -0.8
Spen-201ENSMUST00000078886 Gtf2e1Q9D0D5 440 aa10.03□□□□□ -0.8
Spen-201ENSMUST00000078886 AcrbpQ3V140 540 aa10.02□□□□□ -0.8
Spen-201ENSMUST00000078886 Arhgap27A2AB59 869 aa10.02□□□□□ -0.8
Spen-201ENSMUST00000078886 CntlnA2AM05 1397 aa10.02□□□□□ -0.81
Spen-201ENSMUST00000078886 Q3TQI7 289 aaKnown RBP10.02□□□□□ -0.81
Spen-201ENSMUST00000078886 Tpm4Q6IRU2 248 aa10.02□□□□□ -0.81
Spen-201ENSMUST00000078886 Utp3Q9JI13 469 aaKnown RBP10.01□□□□□ -0.81
Spen-201ENSMUST00000078886 Rbm10Q99KG3 930 aaKnown RBP10.01□□□□□ -0.81
Spen-201ENSMUST00000078886 Eif4g2Q62448 906 aaKnown RBP10.01□□□□□ -0.81
Spen-201ENSMUST00000078886 Ylpm1Q9R0I7 1386 aaKnown RBP10.01□□□□□ -0.81
Spen-201ENSMUST00000078886 Rsf1E9PWW9 1441 aaKnown RBP10.01□□□□□ -0.81
Spen-201ENSMUST00000078886 Kif15Q6P9L6 1387 aa10□□□□□ -0.81
Spen-201ENSMUST00000078886 CrbnQ8C7D2 445 aa10□□□□□ -0.81
Spen-201ENSMUST00000078886 Map4P27546 1125 aaKnown RBP10□□□□□ -0.81
Spen-201ENSMUST00000078886 Gabpb2P81069 414 aa10□□□□□ -0.81
Spen-201ENSMUST00000078886 Ifit1bl1D3Z6F0 470 aa10□□□□□ -0.81
Spen-201ENSMUST00000078886 St18Q80TY4 1045 aa10□□□□□ -0.81
Spen-201ENSMUST00000078886 Ksr2Q3UVC0 959 aa10□□□□□ -0.81
Spen-201ENSMUST00000078886 Polr3gQ6NXY9 223 aa9.99□□□□□ -0.81
Spen-201ENSMUST00000078886 Nol10Q5RJG1 687 aaKnown RBP9.99□□□□□ -0.81
Spen-201ENSMUST00000078886 Sh3bgrQ9WUZ7 214 aa9.99□□□□□ -0.81
Spen-201ENSMUST00000078886 Cgnl1Q6AW69 1298 aa9.99□□□□□ -0.81
Spen-201ENSMUST00000078886 Ccar2Q8VDP4 922 aaKnown RBP9.99□□□□□ -0.81
Spen-201ENSMUST00000078886 Plin1Q8CGN5 517 aa9.99□□□□□ -0.81
Spen-201ENSMUST00000078886 Kif3aP28741 701 aa9.98□□□□□ -0.81
Spen-201ENSMUST00000078886 Brpf1B2RRD7 1212 aa9.98□□□□□ -0.81
Spen-201ENSMUST00000078886 Kif3cO35066 796 aa9.98□□□□□ -0.81
Spen-201ENSMUST00000078886 Filip1lQ6P6L0 1131 aa9.98□□□□□ -0.81
Spen-201ENSMUST00000078886 Ccdc18Q640L5 1455 aa9.98□□□□□ -0.81
Spen-201ENSMUST00000078886 Gcom1E9PZ54 550 aa9.97□□□□□ -0.81
Spen-201ENSMUST00000078886 MyzapQ3UIJ9 466 aa9.97□□□□□ -0.81
Spen-201ENSMUST00000078886 Dcaf11Q91VU6 549 aa9.97□□□□□ -0.81
Spen-201ENSMUST00000078886 Tnnt1O88346 262 aa9.97□□□□□ -0.81
Spen-201ENSMUST00000078886 Nap1l3Q794H2 544 aa9.97□□□□□ -0.81
Spen-201ENSMUST00000078886 Mphosph9A6H5Y1 991 aa9.96□□□□□ -0.81
Spen-201ENSMUST00000078886 Vps53Q8CCB4 832 aa9.96□□□□□ -0.81
Spen-201ENSMUST00000078886 Gm21969J3QJZ1 289 aa9.96□□□□□ -0.81
Spen-201ENSMUST00000078886 Casq1O09165 405 aa9.96□□□□□ -0.81
Spen-201ENSMUST00000078886 Gtf3c5Q8R2T8 520 aa9.96□□□□□ -0.81
Spen-201ENSMUST00000078886 Stard8Q8K031 1019 aa9.96□□□□□ -0.82
Spen-201ENSMUST00000078886 NaspQ99MD9 773 aaKnown RBP9.96□□□□□ -0.82
Spen-201ENSMUST00000078886 Ccdc173A0JLY1 547 aa9.96□□□□□ -0.82
Spen-201ENSMUST00000078886 Kri1Q8VDQ9 704 aaKnown RBP9.96□□□□□ -0.82
Spen-201ENSMUST00000078886 Ccdc146E9Q9F7 977 aa9.95□□□□□ -0.82
Spen-201ENSMUST00000078886 Gbp4Q61107 620 aa9.95□□□□□ -0.82
Spen-201ENSMUST00000078886 Gripap1Q8VD04 806 aa9.95□□□□□ -0.82
Spen-201ENSMUST00000078886 Mns1Q61884 491 aa9.95□□□□□ -0.82
Spen-201ENSMUST00000078886 Ak7Q9D2H2 614 aa9.95□□□□□ -0.82
Spen-201ENSMUST00000078886 Smg6P61406 1418 aaKnown RBP9.94□□□□□ -0.82
Spen-201ENSMUST00000078886 Spag9Q58A65 1321 aaKnown RBP9.94□□□□□ -0.82
Spen-201ENSMUST00000078886 Rfx1P48377 963 aa9.93□□□□□ -0.82
Spen-201ENSMUST00000078886 Hap1O35668 628 aa9.93□□□□□ -0.82
Spen-201ENSMUST00000078886 HmmrQ00547 794 aaKnown RBP9.93□□□□□ -0.82
Spen-201ENSMUST00000078886 Hmgn5Q9JL35 406 aa9.93□□□□□ -0.82
Spen-201ENSMUST00000078886 Rock2P70336 1388 aa9.93□□□□□ -0.82
Spen-201ENSMUST00000078886 Kif4P33174 1231 aa9.93□□□□□ -0.82
Spen-201ENSMUST00000078886 Stk26Q99JT2 416 aa9.93□□□□□ -0.82
Spen-201ENSMUST00000078886 Krt82Q99M74 516 aa9.92□□□□□ -0.82
Spen-201ENSMUST00000078886 Eif2s2Q99L45 331 aaKnown RBP9.92□□□□□ -0.82
Spen-201ENSMUST00000078886 Sycp1Q62209 993 aa9.92□□□□□ -0.82
Spen-201ENSMUST00000078886 Arhgap35Q91YM2 1499 aa9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Trak1Q6PD31 939 aa9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Bicd2Q921C5 820 aa9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Ccdc47Q9D024 483 aaKnown RBP9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 EzrP26040 586 aaKnown RBP9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Aebp1Q640N1 1128 aa9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Rec8Q8C5S7 591 aa9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Srcin1Q9QWI6 1250 aa9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Wdr78E9PYY5 807 aa9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Birc3O08863 600 aa9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Senp3Q9EP97 568 aaKnown RBP9.91□□□□□ -0.82
Spen-201ENSMUST00000078886 Baz1bQ9Z277 1479 aa9.9□□□□□ -0.82
Spen-201ENSMUST00000078886 Gtf2a1Q99PM3 378 aa9.9□□□□□ -0.82
Spen-201ENSMUST00000078886 Ecm2Q5FW85 670 aa9.9□□□□□ -0.82
Spen-201ENSMUST00000078886 Fyco1Q8VDC1 1437 aa9.9□□□□□ -0.82
Spen-201ENSMUST00000078886 Rabep1O35551 862 aa9.9□□□□□ -0.83
Spen-201ENSMUST00000078886 Srek1Q8BZX4 494 aaKnown RBP9.9□□□□□ -0.83
Spen-201ENSMUST00000078886 Hdgfl1Q2VPR5 283 aa9.89□□□□□ -0.83
Spen-201ENSMUST00000078886 A0A1L1SQF0 893 aa9.89□□□□□ -0.83
Spen-201ENSMUST00000078886 Odf2A3KGV1 830 aaKnown RBP9.89□□□□□ -0.83
Spen-201ENSMUST00000078886 KinQ8K339 391 aa9.89□□□□□ -0.83
Spen-201ENSMUST00000078886 Nap1l1P28656 391 aaKnown RBP9.89□□□□□ -0.83
Spen-201ENSMUST00000078886 Trim30cD3YVI9 513 aa9.89□□□□□ -0.83
Spen-201ENSMUST00000078886 Necab1Q8BG18 352 aa9.89□□□□□ -0.83
Spen-201ENSMUST00000078886 Ccdc43Q9CR29 222 aaKnown RBP9.89□□□□□ -0.83
Spen-201ENSMUST00000078886 Chmp3Q9CQ10 224 aa9.89□□□□□ -0.83
Spen-201ENSMUST00000078886 Kif27Q7M6Z4 1394 aa9.89□□□□□ -0.83
Retrieved 100 of 22,080 RNA–protein pairs in 12.5 ms