RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Kif3bQ61771 747 aa15.64■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Tomm22Q9CPQ3 142 aa15.63■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Chmp4cQ9D7F7 232 aa15.63■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Tpd52l1O54818 204 aa15.63■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Lemd3Q9WU40 921 aa15.62■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Smarce1O54941 411 aaKnown RBP15.62■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Dnai2A2AC93 623 aa15.62■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Pak3Q61036 559 aa15.62■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 IbspQ61711 324 aa15.6■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Tsen2Q6P7W5 460 aa15.6■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 SetQ9EQU5 289 aaKnown RBP15.6■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Sf3a1Q8K4Z5 791 aaKnown RBP15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Rfx1P48377 963 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Drc7Q6V3W6 876 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Ccdc88bQ4QRL3 1481 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 AppP12023 770 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Polr3gQ6NXY9 223 aa15.59■□□□□ 0.09
Ccdc88c-201ENSMUST00000068411 Pank3Q8R2W9 370 aa15.58■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Ccdc60Q8C4J0 545 aa15.58■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Tpm3P21107 285 aaKnown RBP15.58■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Nup155Q99P88 1391 aaKnown RBP15.57■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Wdr78E9PYY5 807 aa15.56■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Fam193aQ8CGI1 1231 aaKnown RBP15.56■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Cep162Q6ZQ06 1403 aa15.55■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Utp14aQ640M1 767 aaKnown RBP15.55■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Becn1O88597 448 aa15.55■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Eif2s2Q99L45 331 aaKnown RBP15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Fyco1Q8VDC1 1437 aa15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Cabp4Q8VHC5 271 aa15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 VgfQ0VGU4 617 aa15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Bcl11bQ99PV8 884 aa15.54■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Ripply1Q2WG77 201 aa15.53■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Arhgap35Q91YM2 1499 aa15.53■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 FosbP13346 338 aa15.53■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Inpp5dQ9ES52 1191 aa15.53■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 HdgfP51859 237 aaKnown RBP15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Utp3Q9JI13 469 aaKnown RBP15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 CntlnA2AM05 1397 aa15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Krt82Q99M74 516 aa15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Rsph3aQ3UFY4 516 aa15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Kri1Q8VDQ9 704 aaKnown RBP15.52■□□□□ 0.08
Ccdc88c-201ENSMUST00000068411 Ylpm1Q9R0I7 1386 aaKnown RBP15.52■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Gtf3c3Q3TMP1 882 aa15.52■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Paf1Q8K2T8 535 aa15.51■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Stk31Q99MW1 1018 aa15.51■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Ftsj3Q9DBE9 838 aaKnown RBP15.51■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Atp6v1dP57746 247 aa15.51■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Fnbp4Q6ZQ03 1031 aa15.5■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Ap3b2Q9JME5 1082 aa15.5■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Ddrgk1Q80WW9 315 aa15.5■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Filip1lQ6P6L0 1131 aa15.49■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Gm21969J3QJZ1 289 aa15.49■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Baz1bQ9Z277 1479 aa15.49■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 A0A0U1RNP2 1173 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Cspp1B2RX88 1205 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Nap1l3Q794H2 544 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Sh3bgrQ9WUZ7 214 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 St18Q80TY4 1045 aa15.48■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Gabpb2P81069 414 aa15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 CenpjQ569L8 1344 aa15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Ccdc47Q9D024 483 aaKnown RBP15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Phactr2B1AVP0 632 aa15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Triml2E9PW10 424 aa15.47■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 G3bp1P97855 465 aaKnown RBP15.46■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Esx1O88933 382 aa15.46■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 AcrbpQ3V140 540 aa15.46■□□□□ 0.07
Ccdc88c-201ENSMUST00000068411 Casq1O09165 405 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Znf704Q9ERQ3 566 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Ush1cQ9ES64 910 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Mink1Q9JM52 1308 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Ipo4Q8VI75 1082 aa15.45■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Klf15Q9EPW2 415 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Hdgfl1Q2VPR5 283 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Nol12Q8BG17 217 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Ak7Q9D2H2 614 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Tceal9Q9DD24 104 aa15.44■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Dhx16G3X8X0 1044 aaKnown RBP15.43■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Sart1Q9Z315 806 aaKnown RBP15.43■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 GsdmaQ9EST1 446 aa15.43■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Usp40Q8BWR4 1235 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Neurod6P48986 337 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Plekhh2Q8C115 1491 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Shq1Q7TMX5 569 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Nutm1Q8BHP2 1126 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Kif7B7ZNG0 1348 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Nectin2P32507 530 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Cgnl1Q6AW69 1298 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Fbxo2Q80UW2 297 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Bicd2Q921C5 820 aa15.42■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Usp47Q8BY87 1376 aa15.41■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Smg6P61406 1418 aaKnown RBP15.41■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Ccdc96Q9CR92 584 aa15.41■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Tpm4Q6IRU2 248 aa15.4■□□□□ 0.06
Ccdc88c-201ENSMUST00000068411 Tpm1P58771 284 aa15.39■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Pip4k2bQ80XI4 416 aa15.39■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Tpm2P58774 284 aa15.38■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Podxl2Q8CAE9 603 aa15.38■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Bcl2l13P59017 434 aa15.38■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 BcanQ61361 883 aa15.38■□□□□ 0.05
Ccdc88c-201ENSMUST00000068411 Ccp110Q7TSH4 1004 aa15.38■□□□□ 0.05
Retrieved 100 of 22,080 RNA–protein pairs in 55.5 ms