RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Pank3Q8R2W9 370 aa12.77□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Inpp5dQ9ES52 1191 aa12.77□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Adgrb2Q8CGM1 1561 aa12.77□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Armcx1Q9CX83 456 aa12.76□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Dennd4bQ3U1Y4 1499 aa12.76□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 4930567H17RikQ3V0K5 233 aa12.76□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Rapgef6Q5NCJ1 1609 aa12.76□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Ecm2Q5FW85 670 aa12.75□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Shroom2A2ALU4 1481 aa12.75□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Esx1O88933 382 aa12.75□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Ncoa1P70365 1447 aa12.75□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Gm20521D3Z5F7 333 aa12.74□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Adamts12Q811B3 1600 aa12.73□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Slc4a1apE9PX68 744 aa12.73□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Speer4f1Q9D5Q6 258 aa12.73□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Spag9Q58A65 1321 aaKnown RBP12.73□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Kif3bQ61771 747 aa12.72□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Map3k5O35099 1380 aa12.72□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Chmp5Q9D7S9 219 aa12.71□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Prex2Q3LAC4 1598 aa12.71□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Rock2P70336 1388 aa12.71□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Adcy10Q8C0T9 1614 aa12.71□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Nup160Q9Z0W3 1402 aaKnown RBP12.71□□□□□ -0.37
Pcdh1-201ENSMUST00000057185 Liat1Q810M6 228 aa12.71□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Hdac5Q9Z2V6 1113 aa12.71□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Camsap2Q8C1B1 1461 aa12.71□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Rwdd1Q9CQK7 243 aa12.7□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Arhgap5P97393 1501 aa12.7□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Hsp90ab1P11499 724 aaKnown RBP12.7□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Zfp444Q3TDV8 331 aaKnown RBP12.7□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Gcc2Q8CHG3 1679 aa12.7□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Pik3c2gO70167 1506 aa12.7□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Srpk2O54781 681 aaKnown RBP12.69□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Kdm6bQ5NCY0 1641 aa12.69□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Myom3A2ABU4 1439 aa12.69□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Tmf1B9EKI3 1091 aa12.68□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Srcin1Q9QWI6 1250 aa12.68□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Cd109Q8R422 1442 aa12.68□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Pde4cQ3UEI1 686 aa12.68□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Plekhg5Q66T02 1073 aa12.67□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Dcaf11Q91VU6 549 aa12.66□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Kdm3bQ6ZPY7 1562 aa12.66□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Arid4bA2CG63 1314 aaKnown RBP12.66□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Abca16E9PWJ7 1678 aa12.66□□□□□ -0.38
Pcdh1-201ENSMUST00000057185 Eif4g3Q80XI3 1579 aaKnown RBP12.64□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Spryd3E9Q9B3 442 aa12.64□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Lemd3Q9WU40 921 aa12.64□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Rusc2Q80U22 1514 aa12.64□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Fan1Q69ZT1 1020 aa12.64□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Gm14025A2AP89 1413 aa12.63□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Zscan10Q3URR7 782 aa12.63□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Mlh3A0A1Y7VMP7 1443 aa12.63□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Trappc8E9PWG2 1437 aa12.63□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Arhgef11Q68FM7 1552 aa12.63□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Gm156Q58A37 223 aa12.62□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 SphkapQ6NSW3 1687 aa12.62□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Wdr7Q920I9 1489 aa12.62□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 AlkP97793 1621 aa12.62□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Ttll13A4Q9F6 804 aa12.61□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 EspnQ9ET47 871 aa12.61□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Dnajc5P60904 198 aa12.61□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Dnai1Q8C0M8 701 aa12.61□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Gtf2e1Q9D0D5 440 aa12.61□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Rock1P70335 1354 aa12.6□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Mug2P28666 1451 aa12.6□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Irx3P81067 507 aa12.59□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Sall3Q62255 1320 aa12.59□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Cul7Q8VE73 1689 aa12.59□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Sart3Q9JLI8 962 aaKnown RBP12.59□□□□□ -0.39
Pcdh1-201ENSMUST00000057185 Ppm1gQ61074 542 aa12.58□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Golga2Q921M4 999 aa12.58□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Stag3O70576 1240 aa12.58□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Caskin1Q6P9K8 1431 aa12.58□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Ccdc9Q8VC31 543 aaKnown RBP12.57□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Cdk13Q69ZA1 1511 aaKnown RBP12.57□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Egfem1Q8C088 590 aa12.57□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Prkrip1Q9CWV6 186 aaKnown RBP12.57□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Ythdc2B2RR83 1445 aaKnown RBP12.57□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Fancd2Q80V62 1450 aa12.57□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Senp3Q9EP97 568 aaKnown RBP12.56□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Abcc2Q8VI47 1543 aa12.56□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Ssh2Q5SW75 1423 aa12.56□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Vsig10D3YX43 558 aa12.56□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Fam184bQ0KK56 942 aa12.56□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Cluap1Q8R3P7 413 aa12.56□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Mbd3Q9Z2D8 285 aaKnown RBP12.55□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Prdm16A2A935 1275 aa12.55□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Usp40Q8BWR4 1235 aa12.55□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Arhgef12Q8R4H2 1543 aaKnown RBP12.55□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Kif7B7ZNG0 1348 aa12.55□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Stk26Q99JT2 416 aa12.55□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Atp7aQ64430 1491 aa12.54□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Polr3aB2RXC6 1390 aa12.54□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Kif16bB1AVY7 1312 aa12.54□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Pprc1Q6NZN1 1644 aa12.54□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 PrxO55103 1391 aa12.54□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Mapkbp1Q6NS57 1503 aa12.53□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Eif2s2Q99L45 331 aaKnown RBP12.53□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Exosc9Q9JHI7 438 aaKnown RBP12.53□□□□□ -0.4
Pcdh1-201ENSMUST00000057185 Kiaa1551Q5DTW7 1521 aa12.53□□□□□ -0.4
Retrieved 100 of 22,080 RNA–protein pairs in 155 ms