RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Fancd2Q80V62 1450 aa21.62■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Rad21Q61550 635 aaKnown RBP21.61■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Dnmt1P13864 1620 aaKnown RBP21.61■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Cd109Q8R422 1442 aa21.6■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Rpgrip1lQ8CG73 1264 aa21.6■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Kcnh8P59111 1102 aa21.59■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Fgd6Q69ZL1 1399 aa21.58■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Trpm2Q91YD4 1506 aa21.58■■□□□ 1.05
Ckap4-201ENSMUST00000053871 Kdm2aP59997 1161 aa21.57■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Map3k5O35099 1380 aa21.57■■□□□ 1.04
Ckap4-201ENSMUST00000053871 L3mbtl2P59178 703 aa21.57■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Mroh3A0A1D5RM54 893 aa21.56■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Q7TT23 1179 aa21.56■■□□□ 1.04
Ckap4-201ENSMUST00000053871 RalgapbQ8BQZ4 1484 aa21.55■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Anp32bQ9EST5 272 aaKnown RBP21.55■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Os9Q8K2C7 672 aa21.53■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Atp7aQ64430 1491 aa21.53■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Spag9Q58A65 1321 aaKnown RBP21.53■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Fmn2Q9JL04 1578 aa21.53■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Polr3aB2RXC6 1390 aa21.52■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Gm14025A2AP89 1413 aa21.52■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Asxl1P59598 1514 aa21.52■■□□□ 1.04
Ckap4-201ENSMUST00000053871 Lrrc9Q8CDN9 1456 aa21.52■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Dot1lQ6XZL8 1540 aa21.51■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Pank3Q8R2W9 370 aa21.51■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Inpp5dQ9ES52 1191 aa21.5■■□□□ 1.03
Ckap4-201ENSMUST00000053871 PtprgQ05909 1442 aa21.5■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Pde4cQ3UEI1 686 aa21.49■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Pak3Q61036 559 aa21.49■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Rock2P70336 1388 aa21.48■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Prdm10Q3UTQ7 1184 aa21.47■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Cpsf1Q9EPU4 1441 aaKnown RBP21.47■■□□□ 1.03
Ckap4-201ENSMUST00000053871 DroshaQ5HZJ0 1373 aaKnown RBP21.46■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Zscan21Q07231 555 aa21.46■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Fam208aQ69ZR9 1610 aaKnown RBP21.46■■□□□ 1.03
Ckap4-201ENSMUST00000053871 Adgrl2Q8JZZ7 1487 aa21.45■■□□□ 1.02
Ckap4-201ENSMUST00000053871 Rrbp1Q99PL5 1605 aaKnown RBP21.44■■□□□ 1.02
Ckap4-201ENSMUST00000053871 Ttbk1Q6PCN3 1308 aa21.44■■□□□ 1.02
Ckap4-201ENSMUST00000053871 Sall3Q62255 1320 aa21.43■■□□□ 1.02
Ckap4-201ENSMUST00000053871 Rock1P70335 1354 aa21.43■■□□□ 1.02
Ckap4-201ENSMUST00000053871 Arid3cA6PWV5 409 aa21.42■■□□□ 1.02
Ckap4-201ENSMUST00000053871 Tarbp1E9Q368 1579 aa21.41■■□□□ 1.02
Ckap4-201ENSMUST00000053871 Zfp444Q3TDV8 331 aaKnown RBP21.41■■□□□ 1.02
Ckap4-201ENSMUST00000053871 PrxO55103 1391 aa21.39■■□□□ 1.02
Ckap4-201ENSMUST00000053871 Slc4a1apE9PX68 744 aa21.39■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Liat1Q810M6 228 aa21.39■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Mak16Q8BGS0 296 aaKnown RBP21.38■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Stk24Q99KH8 431 aa21.38■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Kif3bQ61771 747 aa21.37■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Pelp1Q9DBD5 1123 aaKnown RBP21.37■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Gm32742A0A1B0GT42 1604 aa21.36■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Atp10dQ8K2X1 1416 aa21.35■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Erbb3Q61526 1339 aa21.35■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Esx1O88933 382 aa21.35■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Srcin1Q9QWI6 1250 aa21.35■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Zscan10Q3URR7 782 aa21.35■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Iqgap1Q9JKF1 1657 aaKnown RBP21.34■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Eif4g3Q80XI3 1579 aaKnown RBP21.33■■□□□ 1.01
Ckap4-201ENSMUST00000053871 AI481877A2ALV5 1481 aa21.33■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Znf608Q56A10 1511 aa21.33■■□□□ 1.01
Ckap4-201ENSMUST00000053871 Prdm16A2A935 1275 aa21.32■■□□□ 1
Ckap4-201ENSMUST00000053871 Tmf1B9EKI3 1091 aa21.32■■□□□ 1
Ckap4-201ENSMUST00000053871 NeflP08551 543 aa21.32■■□□□ 1
Ckap4-201ENSMUST00000053871 CrbnQ8C7D2 445 aa21.31■■□□□ 1
Ckap4-201ENSMUST00000053871 Gm20521D3Z5F7 333 aa21.3■■□□□ 1
Ckap4-201ENSMUST00000053871 Abcc1O35379 1528 aa21.3■■□□□ 1
Ckap4-201ENSMUST00000053871 Rnf17Q99MV7 1640 aa21.28■■□□□ 1
Ckap4-201ENSMUST00000053871 Kdm5cP41230 1554 aa21.27■■□□□ 1
Ckap4-201ENSMUST00000053871 Edc4Q3UJB9 1406 aaKnown RBP21.27■■□□□ 1
Ckap4-201ENSMUST00000053871 Cdc42bpbQ7TT50 1713 aa21.25■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Rtl5Q5DTT4 599 aa21.25■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Fan1Q69ZT1 1020 aa21.25■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Cnga1P29974 684 aa21.24■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Apbb1Q9QXJ1 710 aa21.24■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Cfap74Q3UY96 1578 aa21.24■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Adamts13Q769J6 1426 aa21.23■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Tcerg1Q8CGF7 1100 aaKnown RBP21.23■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Mast1Q9R1L5 1570 aa21.21■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Fam184bQ0KK56 942 aa21.21■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Nsd2Q8BVE8 1365 aa21.21■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Ppp2r1aQ76MZ3 589 aa21.21■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Egfem1Q8C088 590 aa21.21■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Nlrp6Q91WS2 869 aa21.21■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Kank1E9Q238 1360 aa21.21■□□□□ 0.99
Ckap4-201ENSMUST00000053871 Srpk2O54781 681 aaKnown RBP21.2■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Neurod2Q62414 383 aa21.2■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Lemd3Q9WU40 921 aa21.2■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Usp54Q8BL06 1588 aaKnown RBP21.19■□□□□ 0.98
Ckap4-201ENSMUST00000053871 NhsB1AV60 1647 aa21.19■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Upf2A2AT37 1269 aaKnown RBP21.18■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Abcc3B2RX12 1523 aa21.17■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Dcaf11Q91VU6 549 aa21.17■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Hdac5Q9Z2V6 1113 aa21.17■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Gtf2e1Q9D0D5 440 aa21.17■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Tulp4Q9JIL5 1547 aa21.16■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Usp40Q8BWR4 1235 aa21.16■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Ppip5k1A2ARP1 1436 aa21.15■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Gapvd1Q6PAR5 1458 aa21.15■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Pdcd11Q6NS46 1862 aaKnown RBP21.15■□□□□ 0.98
Ckap4-201ENSMUST00000053871 Chd1P40201 1711 aa21.14■□□□□ 0.97
Retrieved 100 of 22,080 RNA–protein pairs in 15.5 ms