RNA–Protein interactions for RNA: ENSMUST00000022369.8

Vcl-201, Transcript of Vinculin, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcl, Length 5,267 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcl-201ENSMUST00000022369 Znf316Q6PGE4 1016 aa16■□□□□ 0.15
Vcl-201ENSMUST00000022369 4933402E13RikQ9D4D2 429 aa16■□□□□ 0.15
Vcl-201ENSMUST00000022369 Rock1P70335 1354 aa16■□□□□ 0.15
Vcl-201ENSMUST00000022369 Rsph4aQ8BYM7 716 aa15.99■□□□□ 0.15
Vcl-201ENSMUST00000022369 Ylpm1Q9R0I7 1386 aaKnown RBP15.99■□□□□ 0.15
Vcl-201ENSMUST00000022369 Phldb1Q6PDH0 1371 aaKnown RBP15.98■□□□□ 0.15
Vcl-201ENSMUST00000022369 RdxP26043 583 aaKnown RBP15.98■□□□□ 0.15
Vcl-201ENSMUST00000022369 Sox12Q04890 314 aa15.97■□□□□ 0.15
Vcl-201ENSMUST00000022369 Inpp5dQ9ES52 1191 aa15.97■□□□□ 0.15
Vcl-201ENSMUST00000022369 Ddrgk1Q80WW9 315 aa15.97■□□□□ 0.15
Vcl-201ENSMUST00000022369 Brpf1B2RRD7 1212 aa15.96■□□□□ 0.15
Vcl-201ENSMUST00000022369 SlkO54988 1233 aa15.96■□□□□ 0.15
Vcl-201ENSMUST00000022369 Senp3Q9EP97 568 aaKnown RBP15.96■□□□□ 0.15
Vcl-201ENSMUST00000022369 Tpm3-rs7D3Z2H9 248 aa15.96■□□□□ 0.15
Vcl-201ENSMUST00000022369 Rsph3aQ3UFY4 516 aa15.96■□□□□ 0.14
Vcl-201ENSMUST00000022369 Pibf1E9Q6K3 756 aa15.95■□□□□ 0.14
Vcl-201ENSMUST00000022369 Cald1E9QA15 768 aaKnown RBP15.95■□□□□ 0.14
Vcl-201ENSMUST00000022369 Ccdc146E9Q9F7 977 aa15.95■□□□□ 0.14
Vcl-201ENSMUST00000022369 Utp14aQ640M1 767 aaKnown RBP15.94■□□□□ 0.14
Vcl-201ENSMUST00000022369 Fam184bQ0KK56 942 aa15.94■□□□□ 0.14
Vcl-201ENSMUST00000022369 LrpprcQ6PB66 1392 aaKnown RBP15.94■□□□□ 0.14
Vcl-201ENSMUST00000022369 Ccdc60Q8C4J0 545 aa15.93■□□□□ 0.14
Vcl-201ENSMUST00000022369 Ralbp1Q62172 648 aa15.93■□□□□ 0.14
Vcl-201ENSMUST00000022369 CrebrfQ8CDG5 640 aaKnown RBP15.93■□□□□ 0.14
Vcl-201ENSMUST00000022369 Mre11Q61216 706 aa15.92■□□□□ 0.14
Vcl-201ENSMUST00000022369 Stk31Q99MW1 1018 aa15.92■□□□□ 0.14
Vcl-201ENSMUST00000022369 GsdmaQ9EST1 446 aa15.92■□□□□ 0.14
Vcl-201ENSMUST00000022369 Dnai2A2AC93 623 aa15.92■□□□□ 0.14
Vcl-201ENSMUST00000022369 HdgfP51859 237 aaKnown RBP15.92■□□□□ 0.14
Vcl-201ENSMUST00000022369 Atad2bE9Q166 1460 aaKnown RBP15.92■□□□□ 0.14
Vcl-201ENSMUST00000022369 Dapk1Q80YE7 1442 aa15.91■□□□□ 0.14
Vcl-201ENSMUST00000022369 Kif7B7ZNG0 1348 aa15.91■□□□□ 0.14
Vcl-201ENSMUST00000022369 Cspp1B2RX88 1205 aa15.91■□□□□ 0.14
Vcl-201ENSMUST00000022369 AampJ3QN89 436 aa15.9■□□□□ 0.14
Vcl-201ENSMUST00000022369 Usp40Q8BWR4 1235 aa15.9■□□□□ 0.14
Vcl-201ENSMUST00000022369 Becn1O88597 448 aa15.89■□□□□ 0.14
Vcl-201ENSMUST00000022369 Ankrd36D3Z4K0 1415 aa15.89■□□□□ 0.13
Vcl-201ENSMUST00000022369 Kiaa0754Q69ZZ9 979 aa15.89■□□□□ 0.13
Vcl-201ENSMUST00000022369 G3bp1P97855 465 aaKnown RBP15.89■□□□□ 0.13
Vcl-201ENSMUST00000022369 Zscan10Q3URR7 782 aa15.89■□□□□ 0.13
Vcl-201ENSMUST00000022369 Chmp3Q9CQ10 224 aa15.89■□□□□ 0.13
Vcl-201ENSMUST00000022369 VgfQ0VGU4 617 aa15.88■□□□□ 0.13
Vcl-201ENSMUST00000022369 Esx1O88933 382 aa15.87■□□□□ 0.13
Vcl-201ENSMUST00000022369 St18Q80TY4 1045 aa15.87■□□□□ 0.13
Vcl-201ENSMUST00000022369 Gtf3c3Q3TMP1 882 aa15.86■□□□□ 0.13
Vcl-201ENSMUST00000022369 WrnO09053 1401 aa15.86■□□□□ 0.13
Vcl-201ENSMUST00000022369 Smarca4Q3TKT4 1613 aaKnown RBP15.86■□□□□ 0.13
Vcl-201ENSMUST00000022369 Trim58Q5NCC9 485 aa15.86■□□□□ 0.13
Vcl-201ENSMUST00000022369 Trim30aP15533 496 aa15.85■□□□□ 0.13
Vcl-201ENSMUST00000022369 Slc4a10Q5DTL9 1118 aa15.85■□□□□ 0.13
Vcl-201ENSMUST00000022369 Glipr1l2Q9CQ35 332 aa15.85■□□□□ 0.13
Vcl-201ENSMUST00000022369 Filip1lQ6P6L0 1131 aa15.85■□□□□ 0.13
Vcl-201ENSMUST00000022369 Ccer1Q9CQL2 403 aa15.85■□□□□ 0.13
Vcl-201ENSMUST00000022369 Ap3b2Q9JME5 1082 aa15.84■□□□□ 0.13
Vcl-201ENSMUST00000022369 Sf3a1Q8K4Z5 791 aaKnown RBP15.84■□□□□ 0.13
Vcl-201ENSMUST00000022369 Cttnbp2B9EJA2 1648 aa15.84■□□□□ 0.13
Vcl-201ENSMUST00000022369 Casq1O09165 405 aa15.83■□□□□ 0.13
Vcl-201ENSMUST00000022369 Dhx29Q6PGC1 1365 aaKnown RBP15.83■□□□□ 0.12
Vcl-201ENSMUST00000022369 Ak7Q9D2H2 614 aa15.82■□□□□ 0.12
Vcl-201ENSMUST00000022369 Ush1cQ9ES64 910 aa15.82■□□□□ 0.12
Vcl-201ENSMUST00000022369 Gpatch11Q3UFS4 262 aa15.82■□□□□ 0.12
Vcl-201ENSMUST00000022369 Kif16bB1AVY7 1312 aa15.82■□□□□ 0.12
Vcl-201ENSMUST00000022369 Cc2d2bA0A286YDU8 1405 aa15.81■□□□□ 0.12
Vcl-201ENSMUST00000022369 Cabp4Q8VHC5 271 aa15.8■□□□□ 0.12
Vcl-201ENSMUST00000022369 Ggt6Q6PDE7 497 aa15.8■□□□□ 0.12
Vcl-201ENSMUST00000022369 Shq1Q7TMX5 569 aa15.8■□□□□ 0.12
Vcl-201ENSMUST00000022369 Tdrd9Q14BI7 1383 aa15.79■□□□□ 0.12
Vcl-201ENSMUST00000022369 Cux1P53564 1515 aa15.79■□□□□ 0.12
Vcl-201ENSMUST00000022369 Rab11fip3Q8CHD8 1047 aa15.79■□□□□ 0.12
Vcl-201ENSMUST00000022369 Ciz1Q8VEH2 845 aa15.79■□□□□ 0.12
Vcl-201ENSMUST00000022369 Nap1l3Q794H2 544 aa15.79■□□□□ 0.12
Vcl-201ENSMUST00000022369 Eif2s2Q99L45 331 aaKnown RBP15.79■□□□□ 0.12
Vcl-201ENSMUST00000022369 Rpgrip1lQ8CG73 1264 aa15.78■□□□□ 0.12
Vcl-201ENSMUST00000022369 Rabep1O35551 862 aa15.77■□□□□ 0.12
Vcl-201ENSMUST00000022369 Rfx1P48377 963 aa15.77■□□□□ 0.12
Vcl-201ENSMUST00000022369 Ccdc30Q8BVF4 654 aa15.77■□□□□ 0.12
Vcl-201ENSMUST00000022369 Atl3Q91YH5 541 aa15.77■□□□□ 0.12
Vcl-201ENSMUST00000022369 Prkrip1Q9CWV6 186 aaKnown RBP15.77■□□□□ 0.12
Vcl-201ENSMUST00000022369 Ccdc47Q9D024 483 aaKnown RBP15.77■□□□□ 0.12
Vcl-201ENSMUST00000022369 Ncoa2Q61026 1462 aa15.77■□□□□ 0.12
Vcl-201ENSMUST00000022369 Mink1Q9JM52 1308 aa15.77■□□□□ 0.11
Vcl-201ENSMUST00000022369 Q8BT18 775 aa15.77■□□□□ 0.11
Vcl-201ENSMUST00000022369 Tpd52l1O54818 204 aa15.76■□□□□ 0.11
Vcl-201ENSMUST00000022369 Tpm3P21107 285 aaKnown RBP15.76■□□□□ 0.11
Vcl-201ENSMUST00000022369 Vps8Q0P5W1 1427 aa15.76■□□□□ 0.11
Vcl-201ENSMUST00000022369 ErbinQ80TH2 1402 aa15.76■□□□□ 0.11
Vcl-201ENSMUST00000022369 KinQ8K339 391 aa15.75■□□□□ 0.11
Vcl-201ENSMUST00000022369 Sh3bgrQ9WUZ7 214 aa15.75■□□□□ 0.11
Vcl-201ENSMUST00000022369 Nsd2Q8BVE8 1365 aa15.75■□□□□ 0.11
Vcl-201ENSMUST00000022369 Triml2E9PW10 424 aa15.74■□□□□ 0.11
Vcl-201ENSMUST00000022369 Cc2d1aQ8K1A6 943 aa15.74■□□□□ 0.11
Vcl-201ENSMUST00000022369 Znf710Q3U288 666 aa15.73■□□□□ 0.11
Vcl-201ENSMUST00000022369 Jph4Q80WT0 628 aa15.73■□□□□ 0.11
Vcl-201ENSMUST00000022369 Smc4Q8CG47 1286 aa15.73■□□□□ 0.11
Vcl-201ENSMUST00000022369 SetQ9EQU5 289 aaKnown RBP15.72■□□□□ 0.11
Vcl-201ENSMUST00000022369 Pak3Q61036 559 aa15.71■□□□□ 0.11
Vcl-201ENSMUST00000022369 Gnai1B2RSH2 354 aa15.71■□□□□ 0.1
Vcl-201ENSMUST00000022369 Gnai3Q9DC51 354 aa15.71■□□□□ 0.1
Vcl-201ENSMUST00000022369 Gprasp1Q5U4C1 1347 aa15.7■□□□□ 0.1
Vcl-201ENSMUST00000022369 Srek1Q8BZX4 494 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms