RNA–Protein interactions for RNA: ENSMUST00000021761.12

Trim27-201, Transcript of Zinc finger protein RFP, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim27, Length 4,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27-201ENSMUST00000021761 NudcO35685 332 aaKnown RBP17.76■□□□□ 0.43
Trim27-201ENSMUST00000021761 Fam184bQ0KK56 942 aa17.76■□□□□ 0.43
Trim27-201ENSMUST00000021761 Ift140E9PY46 1464 aa17.76■□□□□ 0.43
Trim27-201ENSMUST00000021761 Ak7Q9D2H2 614 aa17.74■□□□□ 0.43
Trim27-201ENSMUST00000021761 Kif7B7ZNG0 1348 aa17.74■□□□□ 0.43
Trim27-201ENSMUST00000021761 Map3k1P53349 1493 aa17.74■□□□□ 0.43
Trim27-201ENSMUST00000021761 Znf316Q6PGE4 1016 aa17.73■□□□□ 0.43
Trim27-201ENSMUST00000021761 AU015836B2RUM3 263 aa17.73■□□□□ 0.43
Trim27-201ENSMUST00000021761 Birc3O08863 600 aa17.73■□□□□ 0.43
Trim27-201ENSMUST00000021761 Frmpd1A2AKB4 1549 aa17.71■□□□□ 0.43
Trim27-201ENSMUST00000021761 Prkrip1Q9CWV6 186 aaKnown RBP17.71■□□□□ 0.43
Trim27-201ENSMUST00000021761 Pank1Q8K4K6 548 aa17.71■□□□□ 0.43
Trim27-201ENSMUST00000021761 Gm7298A0A0N4SVU1 1476 aa17.7■□□□□ 0.42
Trim27-201ENSMUST00000021761 Dhx57Q6P5D3 1388 aaKnown RBP17.69■□□□□ 0.42
Trim27-201ENSMUST00000021761 Ccdc30Q8BVF4 654 aa17.69■□□□□ 0.42
Trim27-201ENSMUST00000021761 Usp40Q8BWR4 1235 aa17.69■□□□□ 0.42
Trim27-201ENSMUST00000021761 Lemd3Q9WU40 921 aa17.69■□□□□ 0.42
Trim27-201ENSMUST00000021761 Naip2Q9QUK4 1447 aa17.69■□□□□ 0.42
Trim27-201ENSMUST00000021761 Tsen2Q6P7W5 460 aa17.68■□□□□ 0.42
Trim27-201ENSMUST00000021761 KnstrnQ9D9Z1 312 aaKnown RBP17.68■□□□□ 0.42
Trim27-201ENSMUST00000021761 Cux1P53564 1515 aa17.67■□□□□ 0.42
Trim27-201ENSMUST00000021761 Spag9Q58A65 1321 aaKnown RBP17.67■□□□□ 0.42
Trim27-201ENSMUST00000021761 Plcd4Q8K3R3 807 aa17.67■□□□□ 0.42
Trim27-201ENSMUST00000021761 3425401B19RikD3Z1D3 1412 aa17.66■□□□□ 0.42
Trim27-201ENSMUST00000021761 Pibf1E9Q6K3 756 aa17.66■□□□□ 0.42
Trim27-201ENSMUST00000021761 KarsQ99MN1 595 aaKnown RBP17.66■□□□□ 0.42
Trim27-201ENSMUST00000021761 A2mQ6GQT1 1474 aa17.65■□□□□ 0.42
Trim27-201ENSMUST00000021761 Pcf11G3X9Z4 1553 aa17.64■□□□□ 0.41
Trim27-201ENSMUST00000021761 TchhA0A0B4J1F9 1599 aa17.64■□□□□ 0.41
Trim27-201ENSMUST00000021761 Kif16bB1AVY7 1312 aa17.64■□□□□ 0.41
Trim27-201ENSMUST00000021761 Safb2Q80YR5 991 aaKnown RBP17.63■□□□□ 0.41
Trim27-201ENSMUST00000021761 Plekhg5Q66T02 1073 aa17.63■□□□□ 0.41
Trim27-201ENSMUST00000021761 Jph4Q80WT0 628 aa17.63■□□□□ 0.41
Trim27-201ENSMUST00000021761 Erich6bQ9D4S6 220 aa17.63■□□□□ 0.41
Trim27-201ENSMUST00000021761 PogzQ8BZH4 1409 aaKnown RBP17.63■□□□□ 0.41
Trim27-201ENSMUST00000021761 Iqcf3Q9D498 203 aa17.62■□□□□ 0.41
Trim27-201ENSMUST00000021761 SlkO54988 1233 aa17.62■□□□□ 0.41
Trim27-201ENSMUST00000021761 Liat1Q810M6 228 aa17.62■□□□□ 0.41
Trim27-201ENSMUST00000021761 Naip5Q9R016 1403 aa17.61■□□□□ 0.41
Trim27-201ENSMUST00000021761 Ccdc60Q8C4J0 545 aa17.61■□□□□ 0.41
Trim27-201ENSMUST00000021761 Ccar1Q8CH18 1146 aaKnown RBP17.61■□□□□ 0.41
Trim27-201ENSMUST00000021761 Hsp90b1P08113 802 aaKnown RBP17.61■□□□□ 0.41
Trim27-201ENSMUST00000021761 Mre11Q61216 706 aa17.6■□□□□ 0.41
Trim27-201ENSMUST00000021761 GsdmaQ9EST1 446 aa17.6■□□□□ 0.41
Trim27-201ENSMUST00000021761 Rfx1P48377 963 aa17.6■□□□□ 0.41
Trim27-201ENSMUST00000021761 Ppp2r1aQ76MZ3 589 aa17.6■□□□□ 0.41
Trim27-201ENSMUST00000021761 CadpsQ80TJ1 1355 aa17.59■□□□□ 0.41
Trim27-201ENSMUST00000021761 Taok2Q6ZQ29 1240 aa17.58■□□□□ 0.41
Trim27-201ENSMUST00000021761 Pde4cQ3UEI1 686 aa17.58■□□□□ 0.41
Trim27-201ENSMUST00000021761 Slx4Q6P1D7 1565 aa17.57■□□□□ 0.4
Trim27-201ENSMUST00000021761 Ccdc146E9Q9F7 977 aa17.56■□□□□ 0.4
Trim27-201ENSMUST00000021761 Camsap1A2AHC3 1581 aa17.56■□□□□ 0.4
Trim27-201ENSMUST00000021761 Nutm1Q8BHP2 1126 aa17.56■□□□□ 0.4
Trim27-201ENSMUST00000021761 Ralbp1Q62172 648 aa17.55■□□□□ 0.4
Trim27-201ENSMUST00000021761 Ccdc183A2AJB1 534 aa17.55■□□□□ 0.4
Trim27-201ENSMUST00000021761 Apaf1O88879 1249 aa17.55■□□□□ 0.4
Trim27-201ENSMUST00000021761 Arhgap31A6X8Z5 1425 aa17.55■□□□□ 0.4
Trim27-201ENSMUST00000021761 Map3k5O35099 1380 aa17.54■□□□□ 0.4
Trim27-201ENSMUST00000021761 Trim58Q5NCC9 485 aa17.54■□□□□ 0.4
Trim27-201ENSMUST00000021761 Ncoa2Q61026 1462 aa17.54■□□□□ 0.4
Trim27-201ENSMUST00000021761 EprsQ8CGC7 1512 aaKnown RBP17.54■□□□□ 0.4
Trim27-201ENSMUST00000021761 Nectin2P32507 530 aa17.53■□□□□ 0.4
Trim27-201ENSMUST00000021761 Chmp4bQ9D8B3 224 aaKnown RBP17.52■□□□□ 0.4
Trim27-201ENSMUST00000021761 Utp14aQ640M1 767 aaKnown RBP17.52■□□□□ 0.4
Trim27-201ENSMUST00000021761 Myom3A2ABU4 1439 aa17.52■□□□□ 0.4
Trim27-201ENSMUST00000021761 Tnnt1O88346 262 aa17.52■□□□□ 0.39
Trim27-201ENSMUST00000021761 Ncoa1P70365 1447 aa17.52■□□□□ 0.39
Trim27-201ENSMUST00000021761 Abcc5Q9R1X5 1436 aa17.52■□□□□ 0.39
Trim27-201ENSMUST00000021761 Mink1Q9JM52 1308 aa17.51■□□□□ 0.39
Trim27-201ENSMUST00000021761 Polr1aO35134 1717 aaKnown RBP17.5■□□□□ 0.39
Trim27-201ENSMUST00000021761 Cd109Q8R422 1442 aa17.49■□□□□ 0.39
Trim27-201ENSMUST00000021761 Tspyl2Q7TQI8 677 aa17.49■□□□□ 0.39
Trim27-201ENSMUST00000021761 Casc1Q6TDU8 730 aa17.48■□□□□ 0.39
Trim27-201ENSMUST00000021761 Cc2d1aQ8K1A6 943 aa17.48■□□□□ 0.39
Trim27-201ENSMUST00000021761 Ankrd26Q811D2 1581 aa17.48■□□□□ 0.39
Trim27-201ENSMUST00000021761 G3bp1P97855 465 aaKnown RBP17.48■□□□□ 0.39
Trim27-201ENSMUST00000021761 Rtn4Q99P72 1162 aaKnown RBP17.48■□□□□ 0.39
Trim27-201ENSMUST00000021761 Ylpm1Q9R0I7 1386 aaKnown RBP17.48■□□□□ 0.39
Trim27-201ENSMUST00000021761 PrxO55103 1391 aa17.47■□□□□ 0.39
Trim27-201ENSMUST00000021761 HnrnpuQ8VEK3 800 aaKnown RBP17.47■□□□□ 0.39
Trim27-201ENSMUST00000021761 Plekhh1Q80TI1 1356 aa17.47■□□□□ 0.39
Trim27-201ENSMUST00000021761 Urb2E9Q7L1 1524 aaKnown RBP17.46■□□□□ 0.39
Trim27-201ENSMUST00000021761 Sox12Q04890 314 aa17.46■□□□□ 0.39
Trim27-201ENSMUST00000021761 Tnpo1Q8BFY9 898 aaKnown RBP17.46■□□□□ 0.39
Trim27-201ENSMUST00000021761 NexmifQ5DTT1 1515 aa17.46■□□□□ 0.39
Trim27-201ENSMUST00000021761 Pcmtd1P59913 357 aa17.45■□□□□ 0.38
Trim27-201ENSMUST00000021761 Chmp4cQ9D7F7 232 aa17.45■□□□□ 0.38
Trim27-201ENSMUST00000021761 Stk11ipQ3TAA7 1072 aa17.45■□□□□ 0.38
Trim27-201ENSMUST00000021761 Stard8Q8K031 1019 aa17.45■□□□□ 0.38
Trim27-201ENSMUST00000021761 Soga1E1U8D0 1418 aa17.44■□□□□ 0.38
Trim27-201ENSMUST00000021761 Puf60Q3UEB3 564 aaKnown RBP17.44■□□□□ 0.38
Trim27-201ENSMUST00000021761 Shq1Q7TMX5 569 aa17.44■□□□□ 0.38
Trim27-201ENSMUST00000021761 Rtf1A2AQ19 715 aaKnown RBP17.42■□□□□ 0.38
Trim27-201ENSMUST00000021761 Q3TQI7 289 aaKnown RBP17.42■□□□□ 0.38
Trim27-201ENSMUST00000021761 CenpjQ569L8 1344 aa17.42■□□□□ 0.38
Trim27-201ENSMUST00000021761 Rab3gap2Q8BMG7 1366 aa17.42■□□□□ 0.38
Trim27-201ENSMUST00000021761 Il16O54824 1322 aa17.41■□□□□ 0.38
Trim27-201ENSMUST00000021761 Sall3Q62255 1320 aa17.41■□□□□ 0.38
Trim27-201ENSMUST00000021761 Mug1P28665 1476 aa17.4■□□□□ 0.38
Trim27-201ENSMUST00000021761 Gm1043A0A140LJC2 1431 aa17.39■□□□□ 0.38
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms