RNA–Protein interactions for RNA: ENSMUST00000020911.13

Sdc1-201, Transcript of Syndecan-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sdc1, Length 3,157 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1-201ENSMUST00000020911 Dhx57Q6P5D3 1388 aaKnown RBP15.2■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Rusc2Q80U22 1514 aa15.19■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Spryd3E9Q9B3 442 aa15.19■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Rrp7aQ9D1C9 280 aaKnown RBP15.18■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Paxip1Q6NZQ4 1056 aa15.18■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Fam163aQ8CAA5 168 aa15.17■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Rfx7F8VPJ6 1459 aa15.17■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Irf5P56477 497 aa15.17■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Dhx9O70133 1380 aaKnown RBP15.17■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Cdc42bpaQ3UU96 1719 aa15.16■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Grwd1Q810D6 446 aaKnown RBP15.16■□□□□ 0.02
Sdc1-201ENSMUST00000020911 SphkapQ6NSW3 1687 aa15.16■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Mroh2aD3Z750 1679 aa15.16■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Ttll5Q8CHB8 1328 aa15.16■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Anp32bQ9EST5 272 aaKnown RBP15.15■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Dusp27Q148W8 1138 aa15.15■□□□□ 0.02
Sdc1-201ENSMUST00000020911 Fgd6Q69ZL1 1399 aa15.14■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Nkx1-2P42580 305 aa15.14■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Slc4a2P13808 1237 aaKnown RBP15.14■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Map4P27546 1125 aaKnown RBP15.14■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Kiaa1551Q5DTW7 1521 aa15.13■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Il16O54824 1322 aa15.13■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Wwc2Q6NXJ0 1187 aa15.13■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Dhx30Q99PU8 1217 aaKnown RBP15.12■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Nup155Q99P88 1391 aaKnown RBP15.11■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Kdm3bQ6ZPY7 1562 aa15.11■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Tshz2Q68FE9 1030 aa15.11■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Cul7Q8VE73 1689 aa15.11■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Cul9Q80TT8 1865 aa15.11■□□□□ 0.01
Sdc1-201ENSMUST00000020911 DekQ7TNV0 380 aaKnown RBP15.1■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Sart1Q9Z315 806 aaKnown RBP15.1■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Arhgef12Q8R4H2 1543 aaKnown RBP15.1■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Map3k4O08648 1597 aa15.09■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Dnmt1P13864 1620 aaKnown RBP15.09■□□□□ 0.01
Sdc1-201ENSMUST00000020911 Trim26Q99PN3 545 aa15.08■□□□□ 0
Sdc1-201ENSMUST00000020911 Rprd2Q6NXI6 1469 aaKnown RBP15.08■□□□□ 0
Sdc1-201ENSMUST00000020911 Mapkbp1Q6NS57 1503 aa15.07■□□□□ 0
Sdc1-201ENSMUST00000020911 AlkP97793 1621 aa15.07■□□□□ 0
Sdc1-201ENSMUST00000020911 Gm14025A2AP89 1413 aa15.07■□□□□ 0
Sdc1-201ENSMUST00000020911 B4galnt3Q6L8S8 986 aa15.07■□□□□ 0
Sdc1-201ENSMUST00000020911 Fam43aQ8BUP8 424 aa15.07■□□□□ 0
Sdc1-201ENSMUST00000020911 L3mbtl2P59178 703 aa15.06■□□□□ 0
Sdc1-201ENSMUST00000020911 Zcchc11B2RX14 1644 aaKnown RBP15.06■□□□□ 0
Sdc1-201ENSMUST00000020911 Arhgap5P97393 1501 aa15.05■□□□□ 0
Sdc1-201ENSMUST00000020911 Rundc1Q0VDN7 615 aa15.05■□□□□ -0
Sdc1-201ENSMUST00000020911 Fhod3Q76LL6 1578 aa15.05■□□□□ -0
Sdc1-201ENSMUST00000020911 Eif4g3Q80XI3 1579 aaKnown RBP15.05■□□□□ -0
Sdc1-201ENSMUST00000020911 ArxO35085 564 aa15.05■□□□□ -0
Sdc1-201ENSMUST00000020911 Mre11Q61216 706 aa15.05■□□□□ -0
Sdc1-201ENSMUST00000020911 Dnai1Q8C0M8 701 aa15.05■□□□□ -0
Sdc1-201ENSMUST00000020911 Fancd2Q80V62 1450 aa15.04■□□□□ -0
Sdc1-201ENSMUST00000020911 Mlh3A0A1Y7VMP7 1443 aa15.04■□□□□ -0
Sdc1-201ENSMUST00000020911 Erich6D3Z6S9 713 aa15.04■□□□□ -0
Sdc1-201ENSMUST00000020911 Trappc8E9PWG2 1437 aa15.03■□□□□ -0
Sdc1-201ENSMUST00000020911 Arid3cA6PWV5 409 aa15.03■□□□□ -0
Sdc1-201ENSMUST00000020911 Ofd1Q80Z25 1017 aa15.03■□□□□ -0
Sdc1-201ENSMUST00000020911 Pdlim2Q8R1G6 349 aa15.03■□□□□ -0
Sdc1-201ENSMUST00000020911 Card11Q8CIS0 1159 aa15.02■□□□□ -0
Sdc1-201ENSMUST00000020911 Exoc6Q8R313 802 aa15.02■□□□□ -0
Sdc1-201ENSMUST00000020911 PogkQ80TC5 607 aa15.01□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Plcd3Q8K2J0 785 aa15.01□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Chmp4bQ9D8B3 224 aaKnown RBP15.01□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Phf14Q9D4H9 881 aa15.01□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Tex2Q6ZPJ0 1128 aaKnown RBP15□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Camsap2Q8C1B1 1461 aa15□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Setbp1Q9Z180 1582 aa14.99□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Supt6hQ62383 1726 aaKnown RBP14.99□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Pik3c2gO70167 1506 aa14.99□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Ttll13A4Q9F6 804 aa14.99□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Ythdc1E9Q5K9 736 aaKnown RBP14.99□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Dbr1Q923B1 550 aa14.99□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Dapk1Q80YE7 1442 aa14.99□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Caskin1Q6P9K8 1431 aa14.98□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Map3k5O35099 1380 aa14.97□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Nom1Q3UFM5 854 aaKnown RBP14.97□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Clstn2Q9ER65 966 aa14.97□□□□□ -0.01
Sdc1-201ENSMUST00000020911 Abcc1O35379 1528 aa14.95□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Rrbp1Q99PL5 1605 aaKnown RBP14.95□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Tnnt2P50752 301 aa14.95□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Ssh2Q5SW75 1423 aa14.94□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Kif14L0N7N1 1674 aaKnown RBP14.94□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Wdr7Q920I9 1489 aa14.93□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Kif20aP97329 887 aa14.93□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Rrp12Q6P5B0 1295 aaKnown RBP14.93□□□□□ -0.02
Sdc1-201ENSMUST00000020911 EspnQ9ET47 871 aa14.93□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Ncoa1P70365 1447 aa14.93□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Spag9Q58A65 1321 aaKnown RBP14.92□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Dnajc14Q921R4 703 aa14.91□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Eif2s2Q99L45 331 aaKnown RBP14.91□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Atp10dQ8K2X1 1416 aa14.91□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Znf608Q56A10 1511 aa14.9□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Ifit1bl1D3Z6F0 470 aa14.9□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Pdia4P08003 638 aaKnown RBP14.9□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Pprc1Q6NZN1 1644 aa14.9□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Cd109Q8R422 1442 aa14.9□□□□□ -0.02
Sdc1-201ENSMUST00000020911 Cwc22Q8C5N3 908 aaKnown RBP14.89□□□□□ -0.03
Sdc1-201ENSMUST00000020911 Lamc1P02468 1607 aaKnown RBP14.89□□□□□ -0.03
Sdc1-201ENSMUST00000020911 Os9Q8K2C7 672 aa14.89□□□□□ -0.03
Sdc1-201ENSMUST00000020911 Fam208aQ69ZR9 1610 aaKnown RBP14.88□□□□□ -0.03
Sdc1-201ENSMUST00000020911 Kdm2aP59997 1161 aa14.87□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 72.3 ms