RNA–Protein interactions for RNA: ENSMUST00000005394.12

Ufd1-201, Transcript of Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ufd1, Length 1,996 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1-201ENSMUST00000005394 Fam208aQ69ZR9 1610 aaKnown RBP16.26■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Kiaa1551Q5DTW7 1521 aa16.26■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Hsp90aa1P07901 733 aaKnown RBP16.26■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Cdc42bpaQ3UU96 1719 aa16.25■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Ccnb3Q810T2 1396 aa16.25■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Abca9Q8K449 1623 aa16.24■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Lamc1P02468 1607 aaKnown RBP16.24■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Gtf3c3Q3TMP1 882 aa16.24■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Wwc2Q6NXJ0 1187 aa16.24■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Pik3c2gO70167 1506 aa16.22■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Cwc22Q8C5N3 908 aaKnown RBP16.21■□□□□ 0.19
Ufd1-201ENSMUST00000005394 Irx3P81067 507 aa16.2■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Usp47Q8BY87 1376 aa16.2■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Arhgap5P97393 1501 aa16.2■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Fgd1P52734 960 aa16.2■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Synj2Q9D2G5 1434 aa16.2■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Kif21bQ9QXL1 1668 aa16.19■□□□□ 0.18
Ufd1-201ENSMUST00000005394 TnikP83510 1323 aa16.18■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Kank1E9Q238 1360 aa16.18■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Mbd5B1AYB6 1498 aa16.18■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Hecw2Q6I6G8 1578 aa16.17■□□□□ 0.18
Ufd1-201ENSMUST00000005394 P3h3Q8CG70 732 aa16.17■□□□□ 0.18
Ufd1-201ENSMUST00000005394 NexmifQ5DTT1 1515 aa16.17■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Kdm6bQ5NCY0 1641 aa16.17■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Ofd1Q80Z25 1017 aa16.17■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Lemd3Q9WU40 921 aa16.17■□□□□ 0.18
Ufd1-201ENSMUST00000005394 L3mbtl2P59178 703 aa16.16■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Myom3A2ABU4 1439 aa16.16■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Iqcf3Q9D498 203 aa16.15■□□□□ 0.18
Ufd1-201ENSMUST00000005394 Kiaa0556Q8C753 1610 aa16.14■□□□□ 0.17
Ufd1-201ENSMUST00000005394 OvosQ3UU35 1456 aa16.13■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Naip6Q9JIB6 1403 aa16.12■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Ube2uB1AUC4 352 aa16.12■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Pkd2O35245 966 aa16.12■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Tdrd9Q14BI7 1383 aa16.11■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Chic2Q9D9G3 165 aa16.11■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Qser1A2BIE1 1698 aa16.1■□□□□ 0.17
Ufd1-201ENSMUST00000005394 DroshaQ5HZJ0 1373 aaKnown RBP16.1■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Rock2P70336 1388 aa16.1■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Kif14L0N7N1 1674 aaKnown RBP16.09■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Trappc8E9PWG2 1437 aa16.09■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Prkrip1Q9CWV6 186 aaKnown RBP16.09■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Ptch1Q61115 1434 aa16.09■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Kidins220E9Q9B7 1793 aa16.09■□□□□ 0.17
Ufd1-201ENSMUST00000005394 Yeats2Q3TUF7 1407 aa16.08■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Slc4a3P16283 1227 aa16.07■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Zmym4A2A791 1549 aaKnown RBP16.07■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Pknox2Q8BG99 474 aa16.05■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Abcc5Q9R1X5 1436 aa16.05■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Cyb5rlB1AS42 316 aa16.04■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Adcy10Q8C0T9 1614 aa16.04■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Atp10aO54827 1508 aa16.04■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Dapk1Q80YE7 1442 aa16.03■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Gm32742A0A1B0GT42 1604 aa16.03■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Abcc3B2RX12 1523 aa16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Dip2cE9PWR4 1557 aa16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Kdm5cP41230 1554 aa16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Caskin1Q6P9K8 1431 aa16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Cul9Q80TT8 1865 aa16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 NpatQ8BMA5 1420 aa16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Sart1Q9Z315 806 aaKnown RBP16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Brwd3A2AHJ4 1799 aa16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Il16O54824 1322 aa16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Erbb3Q61526 1339 aa16.02■□□□□ 0.16
Ufd1-201ENSMUST00000005394 Cfap74Q3UY96 1578 aa16.02■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Plekhh2Q8C115 1491 aa16.02■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Pdcd11Q6NS46 1862 aaKnown RBP16.01■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Kcnh8P59111 1102 aa16.01■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Adamtsl3G3UXC7 1706 aa16.01■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Zmym3Q9JLM4 1370 aa16.01■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Arhgef40Q3UPH7 1517 aa16■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Mug2P28666 1451 aa16■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Cabp1Q9JLK7 227 aa16■□□□□ 0.15
Ufd1-201ENSMUST00000005394 RereQ80TZ9 1558 aa16■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Safb2Q80YR5 991 aaKnown RBP15.99■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Ttc41Q692V3 1318 aa15.99■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Kdm3bQ6ZPY7 1562 aa15.99■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Ipo4Q8VI75 1082 aa15.98■□□□□ 0.15
Ufd1-201ENSMUST00000005394 MyclP10166 368 aa15.98■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Mbd3Q9Z2D8 285 aaKnown RBP15.98■□□□□ 0.15
Ufd1-201ENSMUST00000005394 AlkP97793 1621 aa15.97■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Cpsf1Q9EPU4 1441 aaKnown RBP15.97■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Mtus2Q3UHD3 1353 aa15.97■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Plcd4Q8K3R3 807 aa15.96■□□□□ 0.15
Ufd1-201ENSMUST00000005394 RalgapbQ8BQZ4 1484 aa15.96■□□□□ 0.15
Ufd1-201ENSMUST00000005394 Nkx1-2P42580 305 aa15.96■□□□□ 0.15
Ufd1-201ENSMUST00000005394 SphkapQ6NSW3 1687 aa15.95■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Neurl4Q5NCX5 1563 aa15.95■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Tubgcp6G5E8P0 1769 aa15.93■□□□□ 0.14
Ufd1-201ENSMUST00000005394 NeflP08551 543 aa15.93■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Cfap65Q3V0B4 1847 aa15.93■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Cdc42bpbQ7TT50 1713 aa15.92■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Rundc1Q0VDN7 615 aa15.92■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Pdlim2Q8R1G6 349 aa15.92■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Anp32bQ9EST5 272 aaKnown RBP15.92■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Zfp644E9QA22 1323 aa15.92■□□□□ 0.14
Ufd1-201ENSMUST00000005394 PtprmP28828 1452 aa15.92■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Setd1aE9PYH6 1716 aa15.91■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Mak16Q8BGS0 296 aaKnown RBP15.91■□□□□ 0.14
Ufd1-201ENSMUST00000005394 Map3k5O35099 1380 aa15.91■□□□□ 0.14
Retrieved 100 of 22,080 RNA–protein pairs in 109 ms