RNA–Protein interactions for RNA: snR39B

snR39B, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR39B, Length 96 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR39BsnR39B IMH1Q06704 911 aaKnown RBP-0.08□□□□□ -2.42
snR39BsnR39B RNH203Q12338 110 aa-0.08□□□□□ -2.42
snR39BsnR39B DCP1Q12517 231 aaPredicted RBP-0.08□□□□□ -2.42
snR39BsnR39B YOL159C-AQ3E769 90 aa-0.08□□□□□ -2.42
snR39BsnR39B BOL1Q3E793 110 aa-0.08□□□□□ -2.42
snR39BsnR39B ISN1Q99312 450 aa-0.08□□□□□ -2.42
snR39BsnR39B TPK3P05986 398 aa-0.09□□□□□ -2.42
snR39BsnR39B ATM1P40416 690 aa-0.09□□□□□ -2.42
snR39BsnR39B HIT1P46973 164 aa-0.09□□□□□ -2.42
snR39BsnR39B TOM22P49334 152 aa-0.09□□□□□ -2.42
snR39BsnR39B EBS1Q03466 884 aaKnown RBP-0.09□□□□□ -2.42
snR39BsnR39B PRP42Q03776 544 aaKnown RBP-0.09□□□□□ -2.42
snR39BsnR39B YMR166CQ03829 368 aa-0.09□□□□□ -2.42
snR39BsnR39B ARX1Q03862 593 aaKnown RBP-0.09□□□□□ -2.42
snR39BsnR39B DCS1Q06151 350 aa-0.09□□□□□ -2.42
snR39BsnR39B RDS3Q06835 107 aaPredicted RBP-0.09□□□□□ -2.42
snR39BsnR39B MED2Q12124 431 aa-0.09□□□□□ -2.42
snR39BsnR39B YOR012WQ12351 137 aa-0.09□□□□□ -2.42
snR39BsnR39B ENT1Q12518 454 aa-0.09□□□□□ -2.42
snR39BsnR39B VPS63O13549 108 aa-0.1□□□□□ -2.43
snR39BsnR39B OPI3P05375 206 aa-0.1□□□□□ -2.43
snR39BsnR39B RPL26AP05743 127 aaKnown RBP-0.1□□□□□ -2.43
snR39BsnR39B PWP2P25635 923 aaKnown RBP-0.1□□□□□ -2.43
snR39BsnR39B URA10P30402 227 aa-0.1□□□□□ -2.43
snR39BsnR39B DOA1P36037 715 aa-0.1□□□□□ -2.43
snR39BsnR39B TRM7P38238 310 aaKnown RBP-0.1□□□□□ -2.43
snR39BsnR39B INM1P38710 295 aa-0.1□□□□□ -2.43
snR39BsnR39B PIR5P46999 287 aa-0.1□□□□□ -2.43
snR39BsnR39B RPL26BP53221 127 aaKnown RBP-0.1□□□□□ -2.43
snR39BsnR39B SUR7P54003 302 aa-0.1□□□□□ -2.43
snR39BsnR39B ACT1P60010 375 aaKnown RBP-0.1□□□□□ -2.43
snR39BsnR39B PRP3Q03338 469 aaPredicted RBP-0.1□□□□□ -2.43
snR39BsnR39B MZM1Q03429 123 aaPredicted RBP-0.1□□□□□ -2.43
snR39BsnR39B SPO77Q06134 477 aa-0.1□□□□□ -2.43
snR39BsnR39B SUE1Q06524 206 aa-0.1□□□□□ -2.43
snR39BsnR39B YOL163WP0CF20 169 aa-0.11□□□□□ -2.43
snR39BsnR39B RPL12AP0CX53 165 aaKnown RBP-0.11□□□□□ -2.43
snR39BsnR39B RPL12BP0CX54 165 aa-0.11□□□□□ -2.43
snR39BsnR39B ARF1P11076 181 aaKnown RBP-0.11□□□□□ -2.43
snR39BsnR39B DAP2P18962 818 aa-0.11□□□□□ -2.43
snR39BsnR39B CDC42P19073 191 aa-0.11□□□□□ -2.43
snR39BsnR39B SAS3P34218 831 aa-0.11□□□□□ -2.43
snR39BsnR39B YKL071WP36086 256 aa-0.11□□□□□ -2.43
snR39BsnR39B ASC1P38011 319 aaKnown RBP-0.11□□□□□ -2.43
snR39BsnR39B SMF2P38778 549 aa-0.11□□□□□ -2.43
snR39BsnR39B TPM2P40414 161 aa-0.11□□□□□ -2.43
snR39BsnR39B MOB2P43563 287 aa-0.11□□□□□ -2.43
snR39BsnR39B YGL118CP53132 145 aa-0.11□□□□□ -2.43
snR39BsnR39B TRM44Q02648 567 aaKnown RBP-0.11□□□□□ -2.43
snR39BsnR39B ACL4Q03771 387 aa-0.11□□□□□ -2.43
snR39BsnR39B TIM22Q12328 207 aa-0.11□□□□□ -2.43
snR39BsnR39B MET17P06106 444 aa-0.12□□□□□ -2.43
snR39BsnR39B CDC21P06785 304 aa-0.12□□□□□ -2.43
snR39BsnR39B YOL162WP0CF19 215 aa-0.12□□□□□ -2.43
snR39BsnR39B SLM5P25345 492 aaKnown RBP-0.12□□□□□ -2.43
snR39BsnR39B HSP104P31539 908 aaKnown RBP-0.12□□□□□ -2.43
snR39BsnR39B SSH4P32343 579 aa-0.12□□□□□ -2.43
snR39BsnR39B PEX5P35056 612 aa-0.12□□□□□ -2.43
snR39BsnR39B OLA1P38219 394 aaKnown RBP-0.12□□□□□ -2.43
snR39BsnR39B GRE3P38715 327 aaKnown RBP RIP-Chip data-0.12□□□□□ -2.43not detected
snR39BsnR39B UTP9P38882 575 aaKnown RBP-0.12□□□□□ -2.43
snR39BsnR39B YFR018CP43599 363 aa-0.12□□□□□ -2.43
snR39BsnR39B YJR141WP47172 347 aaPredicted RBP-0.12□□□□□ -2.43
snR39BsnR39B LSG1P53145 640 aaKnown RBP-0.12□□□□□ -2.43
snR39BsnR39B RSC1P53236 928 aa-0.12□□□□□ -2.43
snR39BsnR39B RPT4P53549 437 aaKnown RBP-0.12□□□□□ -2.43
snR39BsnR39B YMR130WQ04223 302 aa-0.12□□□□□ -2.43
snR39BsnR39B NOP6Q07623 225 aaKnown RBP-0.12□□□□□ -2.43
snR39BsnR39B RPN8Q08723 338 aaKnown RBP-0.12□□□□□ -2.43
snR39BsnR39B YPL150WQ12152 901 aa-0.12□□□□□ -2.43
snR39BsnR39B EMC6Q12431 108 aa-0.12□□□□□ -2.43
snR39BsnR39B TDH1P00360 332 aaKnown RBP-0.13□□□□□ -2.43
snR39BsnR39B RNA1P11745 407 aaKnown RBP-0.13□□□□□ -2.43
snR39BsnR39B MRPL20P22354 195 aaPredicted RBP-0.13□□□□□ -2.43
snR39BsnR39B PRE7P23724 241 aaKnown RBP-0.13□□□□□ -2.43
snR39BsnR39B BYE1P36106 594 aa-0.13□□□□□ -2.43
snR39BsnR39B YHR045WP38775 560 aa-0.13□□□□□ -2.43
snR39BsnR39B ARF3P40994 183 aaRIP-Chip data-0.13□□□□□ -2.43not detected
snR39BsnR39B SDS23P53172 527 aa-0.13□□□□□ -2.43
snR39BsnR39B YNL040WP53960 456 aaPredicted RBP-0.13□□□□□ -2.43
snR39BsnR39B ERO1Q03103 563 aa-0.13□□□□□ -2.43
snR39BsnR39B TRM82Q03774 444 aa-0.13□□□□□ -2.43
snR39BsnR39B URC2Q04411 772 aa-0.13□□□□□ -2.43
snR39BsnR39B YLH47Q06493 454 aa-0.13□□□□□ -2.43
snR39BsnR39B ALE1Q08548 619 aa-0.13□□□□□ -2.43
snR39BsnR39B MRPL8P22353 238 aa-0.14□□□□□ -2.43
snR39BsnR39B SER3P40054 469 aa-0.14□□□□□ -2.43
snR39BsnR39B AYR1P40471 297 aa-0.14□□□□□ -2.43
snR39BsnR39B SLM1P40485 686 aa-0.14□□□□□ -2.43
snR39BsnR39B RRB1Q04225 511 aaKnown RBP-0.14□□□□□ -2.43
snR39BsnR39B YDR341CQ05506 607 aaKnown RBP-0.14□□□□□ -2.43
snR39BsnR39B DON1Q05610 365 aa-0.14□□□□□ -2.43
snR39BsnR39B MTR10Q99189 972 aa-0.14□□□□□ -2.43
snR39BsnR39B VPS1P21576 704 aaKnown RBP-0.15□□□□□ -2.43
snR39BsnR39B TRX2P22803 104 aaKnown RBP-0.15□□□□□ -2.43
snR39BsnR39B RFT1P38206 574 aaPredicted RBP-0.15□□□□□ -2.43
snR39BsnR39B QDR3P38227 689 aa-0.15□□□□□ -2.43
snR39BsnR39B YER135CP40082 130 aa-0.15□□□□□ -2.43
snR39BsnR39B LCB2P40970 561 aa-0.15□□□□□ -2.43
snR39BsnR39B FMP48P53233 369 aa-0.15□□□□□ -2.43
Retrieved 100 of 5,963 RNA–protein pairs in 47.9 ms