RNA–Protein interactions for RNA: YPR005C

HAL1, Transcript of Cytoplasmic protein involved in halotolerance, yeast

Gene HAL1, Length 885 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HAL1	YPR005C	GCN20	P43535	752 aa	Known RBP	4.94	□□□□□ -1.62
HAL1	YPR005C	LCB3	P47013	409 aa		4.94	□□□□□ -1.62
HAL1	YPR005C	KAP114	P53067	1004 aa		4.94	□□□□□ -1.62
HAL1	YPR005C	MRM2	P53123	320 aa		4.94	□□□□□ -1.62
HAL1	YPR005C	YMR010W	Q03687	405 aa		4.94	□□□□□ -1.62
HAL1	YPR005C	CTS2	Q06350	511 aa		4.94	□□□□□ -1.62
HAL1	YPR005C	PBP4	Q07362	185 aa	Known RBP	4.94	□□□□□ -1.62
HAL1	YPR005C	DAP1	Q12091	152 aa		4.94	□□□□□ -1.62
HAL1	YPR005C	ATS1	P31386	333 aa		4.93	□□□□□ -1.62
HAL1	YPR005C	PRS1	P32895	427 aa	Known RBP	4.93	□□□□□ -1.62
HAL1	YPR005C	SWD2	P36104	329 aa	Predicted RBP	4.93	□□□□□ -1.62
HAL1	YPR005C	TCD1	P38756	429 aa		4.93	□□□□□ -1.62
HAL1	YPR005C	DFG10	P40526	253 aa		4.93	□□□□□ -1.62
HAL1	YPR005C	YFL067W	P43537	175 aa		4.93	□□□□□ -1.62
HAL1	YPR005C	SEH1	P53011	349 aa	Known RBP	4.93	□□□□□ -1.62
HAL1	YPR005C	SRL4	Q03085	281 aa		4.93	□□□□□ -1.62
HAL1	YPR005C	GMC2	Q06201	188 aa		4.93	□□□□□ -1.62
HAL1	YPR005C	SAC3	P46674	1301 aa		4.93	□□□□□ -1.62
HAL1	YPR005C	TRP1	P00912	224 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	YSR3	P23501	404 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	RVS161	P25343	265 aa	Known RBP	4.92	□□□□□ -1.62
HAL1	YPR005C	RPL16A	P26784	199 aa	Known RBP	4.92	□□□□□ -1.62
HAL1	YPR005C	PRO3	P32263	286 aa	Known RBP	4.92	□□□□□ -1.62
HAL1	YPR005C	MEI5	P32489	222 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	ZRT1	P32804	376 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	MSN4	P33749	630 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	YNL320W	P42840	284 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	AGP3	P43548	558 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	LSG1	P53145	640 aa	Known RBP	4.92	□□□□□ -1.62
HAL1	YPR005C	WSC2	P53832	503 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	NUP116	Q02630	1113 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	IRC4	Q03036	179 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	YRM1	Q12340	786 aa		4.92	□□□□□ -1.62
HAL1	YPR005C	CFT1	Q06632	1357 aa	Known RBP	4.91	□□□□□ -1.62
HAL1	YPR005C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
HAL1	YPR005C	HEM15	P16622	393 aa		4.91	□□□□□ -1.62
HAL1	YPR005C	RPB4	P20433	221 aa	Predicted RBP	4.91	□□□□□ -1.62
HAL1	YPR005C	AGA1	P32323	725 aa		4.91	□□□□□ -1.62
HAL1	YPR005C	BMH2	P34730	273 aa	Known RBP	4.91	□□□□□ -1.62
HAL1	YPR005C	MAM33	P40513	266 aa		4.91	□□□□□ -1.62
HAL1	YPR005C	WWM1	P43582	211 aa	Known RBP	4.91	□□□□□ -1.62
HAL1	YPR005C	YJL118W	P47022	219 aa		4.91	□□□□□ -1.62
HAL1	YPR005C	SMC5	Q08204	1093 aa		4.91	□□□□□ -1.62
HAL1	YPR005C	ERP3	Q12403	225 aa		4.91	□□□□□ -1.62
HAL1	YPR005C	SEC1	P30619	724 aa	Known RBP	4.9	□□□□□ -1.63
HAL1	YPR005C	SUA5	P32579	426 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	SPO23	P33757	523 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
HAL1	YPR005C	YKT6	P36015	200 aa	Known RBP	4.9	□□□□□ -1.63
HAL1	YPR005C	COS9	P36034	407 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	ECM8	P38246	354 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	TDA11	P38854	504 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	MDM31	P38880	579 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	FMC1	P40491	155 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	YJL213W	P40896	331 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	CTK3	P46963	296 aa	Predicted RBP	4.9	□□□□□ -1.63
HAL1	YPR005C	BIO3	P50277	480 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	HCH1	P53834	153 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	SED5	Q01590	340 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	BSC6	Q08280	497 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	DDC1	Q08949	612 aa		4.9	□□□□□ -1.63
HAL1	YPR005C	ADH2	P00331	348 aa	Known RBP	4.89	□□□□□ -1.63
HAL1	YPR005C	COX2	P00410	251 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	MSF1	P08425	469 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	ARO4	P32449	370 aa	Known RBP	4.89	□□□□□ -1.63
HAL1	YPR005C	YHR035W	P38769	630 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	SMF2	P38778	549 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	RTR1	P40084	226 aa	Predicted RBP	4.89	□□□□□ -1.63
HAL1	YPR005C	PRM5	P40476	318 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	YIA6	P40556	373 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	SCS3	P53012	380 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	MSO1	P53604	210 aa	Known RBP	4.89	□□□□□ -1.63
HAL1	YPR005C	INP2	Q03824	705 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	YMR027W	Q04371	470 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	YDL109C	Q12103	647 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	RGT2	Q12300	763 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	IZH4	Q99393	312 aa		4.89	□□□□□ -1.63
HAL1	YPR005C	ATP6	P00854	259 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	CYC3	P06182	269 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	RAD3	P06839	778 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	NAM2	P11325	894 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	POL30	P15873	258 aa	Known RBP	4.88	□□□□□ -1.63
HAL1	YPR005C	VPS3	P23643	1011 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	RRT12	P25381	491 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	YKL071W	P36086	256 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	AVT5	P38176	459 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	YGR210C	P42942	411 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	YFL040W	P43562	540 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	YAR1	P46683	200 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	COS10	P52924	374 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	TIM21	P53220	239 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	TDA1	Q03533	586 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	ADH6	Q04894	360 aa	Known RBP	4.88	□□□□□ -1.63
HAL1	YPR005C	YDL114W	Q07530	308 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	CMS1	Q07897	291 aa	Known RBP	4.88	□□□□□ -1.63
HAL1	YPR005C	ESA1	Q08649	445 aa		4.88	□□□□□ -1.63
HAL1	YPR005C	PET123	P17558	318 aa		4.87	□□□□□ -1.63
HAL1	YPR005C	VPS1	P21576	704 aa	Known RBP	4.87	□□□□□ -1.63
HAL1	YPR005C	MCK1	P21965	375 aa	Known RBP	4.87	□□□□□ -1.63
HAL1	YPR005C	YCR016W	P25617	290 aa	Known RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms